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Sigleo, Anne C.. "Stable isotopic indicators for the biogeochemical cycling of organic matter in a temperate North Pacific estuary, Oregon, USA." Eos, Transactions - American Geophysical Union 82 (2001).
Hettman, Gary, and Oregon. Dept. of Fish and Wildlife. The starry flounder In Informational Report. Vol. no.79-2. Oregon Department of Fish and Wildlife, 1979.
Gallob, Joel. "State creates reef for oyster beds." News-Times (1999): 3.
Lumley, Perry E., and Oregon. Division of State Lands. State Ownership, Yaquina Bay - Port of Newport North Shore Moorage Basin and Waterfront of Newport (Submerged and Submersible Lands). Salem, Or.: Oregon Division of State Lands, 1976.
Oregon. State Marine Board,. Statewide Boating Survey, 1993., 1993.
Hoy, M. T., and Oregon. Fish Commission. Statistical Bulletin: Take or Catch of Commercial Food Fish, Columbia River and Major Coastal Streams, 1928-1943. Portland, Or.: Fish Commission of Oregon, 1944.
Detweiler, John Henry. A Statistical Study of Oregon Coastal Winds. M.S. ed. Corvallis, Or.: Oregon State University, 1971.
Gaumer, Thomas F., Jean E. McCrae, and Oregon. Dept. of Fish and Wildlife. Status of Bay Clams in Oregon 1975-1988. Oregon Department of Fish and Wildlife Marine Regulations Special Report. Oregon Department of Fish and Wildlife, 1990.
Lund, Dennis. Status of Oyster Seed Production Studies at the OSU Pilot Oyster Hatchery, 1971-1972., 1972.
Cummings, T. Edwin, and Oregon. Fish Commission. Status of private chum salmon hatcheries in Oregon In Informational Report. Vol. no.73-1. Fish Commission of Oregon, Management and Research Division, 1973.
Cummings, T. Edwin, Lawerence Korn, and Oregon. Fish Commission. Status of private salmon hatcheries in Oregon, 1973-74 In Coastal Rivers Information Report. Vol. no.75-1. Fish Commission of Oregon, Management and Research Division, 1975.
Allee, Brian J.. "The status of saltwater maturation of coho salmon (Oncorhynchus kisutch) at Oregon Aqua-Foods, Inc." In Salmonid Broodstock Maturation. Proceedings of Workshops held at Seattle, Washington May 20-22, 1980 and March 11, 1981, p.1-8. Vol. no. 80-1. WSG-WO no. 80-1. Seattle, WA: University of Washington. Washington Sea Grant., 1980.
Oregon. Dept. of Fish and Wildlife. Marine Region. Status of Stocks: Bay Clams, Bait Shrimp., 1990.
Yamada, Sylvia Behrens, Cameron Royer, Shon Schooler, Rebecca Flitcroft, Mitch Vance, Andrea Randall, and Jennifer Fisher. Status of the European Green Crab, Carcinus maenas, (aka 5-spine crab) in Oregon Estuaries. Report for 2022. Portland, Or.: Pacific States Marine Fisheries Commission. Aquatic Nuisance Species Project, 2023.
Yamada, Sylvia Behrens, Bree Yednock, Julia Indivero, Christina Geierman, Joel A. Prickett, Andrea Randall, and Adrianne Akmajian. Status of the European Green Crab, Carcinus maenas, in Oregon and Washington coastal Estuaries in 2017. Pacific States Marine Fisheries Commission. Aquatic Nuisance Species Project, 2018.
Yamada, Sylvia Behrens, Cameron Royer, Shon Schooler, Jennifer Fisher, Andrea Randall, Chelsey Buffington, Alex Stote, and Adrianne Akmajian. Status of the European Green Crab, Carcinus maenas, in Oregon and Washington Coastal Estuaries. Report for 2020 and 2021. Portland, Or.: Pacific States Marine Fisheries Commission. Aquatic Nuisance Species Project, 2022.
Anonymous. Steamboats of Yaquina Bay and Yaquina River [web page]. Vol. 2013., 2012.
Crawford, J. G.. Stereographs of Yaquina Bay, Oregon., 1870.
Breese, Wilbur P., Raymond E Millemann, and Roland E. Dimick. "Stimulation of spawning in the mussels, Mytilus edulis Linnaeus and Mytilus californianus Conrad, by kraft mill effluent." The Biological Bulletin 125 (1963): p.197-205.
DeCourcy, Bolton W.. "On the Straits of Juan de Fuca, Puget Sound; and government improvements on the Pacific Coast." Transactions of the American Society of Civil Engineers 25 (1891): p.420-441.
Graehl, Nicholas A., Harvey M. Kelsey, Robert C. Witter, Eileen Hemphill-Haley, and Simon E. Engelhart. "Stratigraphic and microfossil evidence for a 4500-year history of Cascadia subduction zone earthquakes and tsunamis at Yaquina River estuary, Oregon, USA." Geological Society of America Bulletin, 127 (2015): p.211-226.
Darienzo, Mark E., Curt D. Peterson, and Charles Clough. "Stratigraphic evidence for great subduction-zone earthquakes at four estuaries in northern Oregon, USA." Journal of Coastal Research 10 (1994): 850-876.
Schenck, Hubert G.. Stratigraphic relations of western Oregon Oligocene formations In University of California Publications. Bulletin of the Department of Geological Sciences. Vol. 18., 1928.
Heacock, Robert L.. Stratigraphy and Foraminifera of the Upper Part of the Nye Formation, Yaquina Bay, Oregon. M.S. ed. Corvallis, Or.: Oregon State College, 1952.
Goodwin, Clinton John. Stratigraphy and Sedimentation of the Yaquina Formation, Lincoln County, Oregon. M. S. ed. Corvallis, Or.: Oregon State University, 1972.

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