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Murray, R. J.. Application of Landsat-2 Data for an Inventory of Eelgrass and Kelp Beds on the Oregon Coast. Corvallis, Or.: Oregon State University, 1978.
Bayer, Range D.. Audubon Important Bird Areas Program in Oregon: Site Nomination Form [Yaquina Bay]., 2002.
Lukas, Gerald, and Oregon. Fish Commission. Clam-Abalone Spawning and Rearing Annual Report July 1, 1971 to June 30, 1972. Portland, Or.: U.S. Department of Commerce. National Oceanic and Atmospheric Administration, 1971.
Lukas, Gerald, and Oregon. Fish Commission. Clam-Abalone Spawning and Rearing Completion Report July 1, 1970 to June 30, 1973. [Portland, Or.]: Oregon Fish Commission, 1973.
Marston, Richard A.. A Critique of the OCC & DC Mapping Scheme in Coastal Wetlands of Oregon and a Bibliography of Aerial Photo Coverage for Oregon's Estuaries, 1964-1975., 1977.
McIntire, David C., and Barry L. Wulff. Ecological-Physiological Investigations of Littoral Diatom Communities of the Yaquina River Estuary, Oregon. National Science Foundation Research Grant GB-7203. Corvallis, Or.: Department of Botany and Plant Pathology, Oregon State University, 1969.
Phillips, Ronald C., National Coastal Ecosystems Team(U.S.), and United States. Army. Corps of Engineers. The ecology of eelgrass meadows of the Pacific Northwest: A community profile In FWS/OBS. Vol. no.84/24. United States Fish and Wildlife Service, 1984.
Simenstad, Charles A., and National Coastal Ecosystems Team. The ecology of estuarine channels of the Pacific Northwest coast: a community profile In FWS/OBS. Vol. no.83/05. Washington, D.C.: U.S. Department of the Interior. Fish and Wildlife Service, 1983.
Seliskar, Denise M., John L. Gallagher, National Coastal Ecosystems Team(U.S.), United States. Fish and Wildlife Service. Division of Biological Services, and University of Delaware. College of Marine Studies. The ecology of tidal marshes of the Pacific Northwest coast : a community profile In FWS/OBS. Vol. no.82/32. Washington, DC, 1983.
Brophy, Laura S., and Green Point Consulting. Effectiveness Monitoring at Tidal Wetland Restoration and Reference Sites in the Siuslaw River Estuary: a Tidal Swamp Focus. Corvallis, Or.: Green Point Consulting, 2009.
DeWitt, Ted. EPA’s Benthic Habitat Data for Yaquina Estuary [PowerPoint Presentation]., 2014.
Mohler, June E., David S. Fox, Bill(William O.) Hastie, and Oregon. Dept. of Fish and Wildlife. Guide to Oregon's Rocky Intertidal Habitats. Newport, Or.: Oregon Dept. of Fish and Wildlife. Marine Resources Program,, 1997.
Adamus, Paul R.. Hydrogeomorphic (HGM) Assessment Guidebook for Tidal Wetlands of the Oregon Coast, Part 1: Rapid Assessment Method. Charleston, Or.: Coos Watershed Association, 2006.
Garber, Jonathon H., John Jr. L. Collins, Michael W. Davis, and Water Resources Research Institute. Impact of estuarine benthic algal production on dissolved nutrients and water quality in the Yaquina River estuary, Oregon In WRRI. Vol. no. 112. Corvallis, Or.: Water Resources Research Institute, Oregon State University, 1992.
Phibbs, Duane, and Oregon. Fish Commission. Laboratory Rearing and Hatching of Pacific Coast Clams and Oysters. Annual Report July 1, 1967 - June 30, 1968. U.S. Department of the Interior. Fish and Wildlife Service, 1968.
Phibbs, Duane, and Oregon. Fish Commission. Laboratory Rearing and Hatching of Pacific Coast Clams and Oysters. Quarterly Report October 1, 1968 - December 31, 1968. U.S. Department of the Interior. Fish and Wildlife Service, 1969.
Phibbs, Duane, and Oregon. Fish Commission. Laboratory Rearing and Hatching of Pacific Coast Clams and Oysters. Annual Report July 1, 1968 - June 30, 1969. U.S. Department of the Interior. Fish and Wildlife Service, 1969.
Phibbs, Duane, and Oregon. Fish Commission. Laboratory Rearing and Hatching of Pacific Coast Clams and Oysters. Annual Report July 1, 1969-June 30, 1970. U.S. Department of the Interior. Fish and Wildlife Service, 1970.
U.S. National Oceanic and Atmospheric Administration. NOAA's Estuarine Eutrophication Survey: Volume 5: Pacific Coast Region. v.5. Silver Spring, MD: Office of Ocean Resources Conservation and Assessment, 1998.
Oregon. Dept. of State Lands, Oregon. Dept. of Land Conservation and Development, Shapiro & Associates(Seattle, Wash.), and Winterbrook Planning. Oregon Wetland Planning Guidebook. Salem, Or.: Oregon Dept. of State Lands, Oregon Dept. of Land Conservation and Development, 2004.
Oregon. Dept. of Environmental Quality. Oregon's Statewide Assessment of Nonpoint Source Problems, Edited by David A. Rickert. [Oregon Department of Environmental Quality], 1978.
McCrae, Jean., and Laimons Osis. Plants and Animals of Oregon's Rocky Intertidal Habitat. Newport, Or.: Oregon Dept. of Fish and Wildlife,, 1989.
U.S. Department of the Interior. Fish and Wildlife Service. Bureau of Sport Fisheries and Wildlife. Preliminary Survey of Fish and Wildlife in Relation to the Ecological and Biological Aspects of Yaquina Bay Oregon. Portland, Or., 1968.
Brophy, Laura S., and Green Point Consulting. Recommended NWI Revisions and GIS Layer Development for Tidal Wetlands of the Yaquina and Alsea River Estuaries. Corvallis, Or.: Green Point Consulting, 2010.
Brooker, D. L., R. C. Worrest, and U.S.Environmental Protection Agency. Response of Estuarine Diatom Assemblages to Ultraviolet-B Radiation (290-320 nm). Vol. EPA/600/D-85/016. Corvallis, Or.: U.S. Environmental Protection Agency, 1985.

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