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Cramer, Steven P., and Erick S. Van Dyke. The Status of Coastal Steelhead in Oregon in Regards to the Endangered Species Act. Gresham, Or.: S.P. Cramer & Associates, 1994.
Sounhein, Briana, Eric Brown, Mark Lewis, and Matt Weeber. Status of Oregon stocks of coho almon, 2015 In Monitoring Program Report (Oregon Plan for Salmon and Watersheds). Vol. no.OPSW-ODFW-2016-3. Corvallis, Or.: Oregon Adult Salmonid Inventory & Sampling Project, ODFW, 2015.
Sounhein, Briana, Eric Brown, Mark Lewis, and Matt Weeber. Status of Oregon stocks of coho salmon In Monitoring Program Report (Oregon Plan for Salmon and Watersheds) . Vol. no.OPSW-ODFW-2017-3. Corvallis, Or.: Oregon Adult Salmonid Inventory & Sampling Project, ODFW, 2016.
Sounhein, Briana, Eric Brown, Mark Lewis, and Matt Weeber. Status of Oregon stocks of coho salmon, 2013 In Monitoring Program Report (Oregon Plan for Salmon and Watersheds). Vol. no.OPSW-ODFW-2014-3. Corvallis, Or.: Oregon Adult Salmonid Inventory & Sampling Project, ODFW, 2014.
Cramer, Steven P.. Status of Oregon's Coastal Coho and Measures for Population Rebuilding : Final Report. Gresham, Or.: S.P. Cramer & Associates, Inc., 1994.
Myers, James M., Robert G. Kope, Gregory J. Bryant, David J. Teel, Lisa J. Lierheimer, Thomas C. Wainwright, Stewart W. Grant, William F. Waknitz, Kathleen Neely, Steven T. Lindley et al. Status review of chinook salmon from Washington, Idaho, Oregon, and California In NOAA Technical Memorandum NMFS-NWFSC . Vol. no.35. [Seattle, Wash.] : U.S. Dept. of Commerce, National Oceanic and Atmospheric Administration, National Marine Fisheries Service, 1998.
Johnson, Orlay W., Mary H. Ruckelshaus, Stewart W. Grant, William F. Waknitz, Ann M. Garrett, Gregory J. Bryant, Kathleen Neely, Jeffrey J. Hard, and Northwest Fisheries Science Center(U.S.). Status review of coastal cutthroat trout from Washington, Oregon, and California In NOAA Technical Memorandum NMFS-NWFSC. [Seattle, Wash.]: Northwest Fisheries Science Center, 1999.
Weitkamp, Laurie A., Thomas C. Wainwright, Gregory J. Bryant, George B. Milner, David J. Teel, Robert G. Kope, and Robin S. Waples. Status review of coho salmon from Washington, Oregon, and California In NOAA Ttechnical Memorandum NMFS-NWFSC . Vol. no.24. Seattle, Wash.: U.S. National Marine Fisheries Service, Northwest Fisheries Science Center , 1995.
Busby, Peggy J., Thomas C. Wainwright, Gregory J. Bryant, Lisa J. Lierheimer, Robin S. Waples, William F. Waknitz, Irma Lagomarsino, U.S. National Marine Fisheries Service. Northwest Fisheries Science Center, and U.S. National Marine Fisheries Service. Southwest Region. Protected Species Management Division. Status review of West Coast steelhead from Washington, Idaho, Oregon, and California In NOAA Technical Memorandum NMFS-NWFSC. Vol. no.27. Seattle, Wash.?: U.S. National Marine Fisheries Service, 1996.
Anonymous. Steamboats of Yaquina Bay and Yaquina River [web page]. Vol. 2013., 2012.
Breese, Wilbur P., Raymond E Millemann, and Roland E. Dimick. "Stimulation of spawning in the mussels, Mytilus edulis Linnaeus and Mytilus californianus Conrad, by kraft mill effluent." The Biological Bulletin 125 (1963): p.197-205.
Schenck, Hubert G.. Stratigraphic relations of western Oregon Oligocene formations In University of California Publications. Bulletin of the Department of Geological Sciences. Vol. 18., 1928.
Goodwin, Clinton J.. Stratigraphy and Sedimentation of the Yaquina Formation, Lincoln County, Oregon. M.S. ed. Corvallis, Or.: Oregon State University, 1973.
Gebhardt, Gary Alan. Studies on the Molluscan and Fish Hosts of the "Salmon Poisoning" Fluke, Nanophyetus salmincola (Chapin). M.S. ed. Corvallis, Or.: Oregon State University, 1966.
Williamson, Kenneth J.. A Study of the Quantity and Distribution of Bark Debris Resulting from Log Rafting. M.S. ed. Corvallis, Or.: Oregon State University, 1970.
Gharrett,(compiler) J. T.. Summary, Coastal River Regulations, 1878-1950., 1953.
Oregon. Advisory Committee to the State Land Board, and Stanley F. Hamilton. Supplementary Report to an Inventory of Filled Lands in Yaquina Bay. [Salem, Or.]: Oregon Division of State Lands, 1972.
Arkoosh, M. R., E. Clemons, A. N. Kagley, C. Stafford, A. C. Glass, K. Jacobson, P. Reno, M. S. Myers, E. Casillas, F. Loge et al. "Survey of pathogens in juvenile salmon Oncorhynchus spp. migrating through Pacific Northwest estuaries." Journal of Aquatic Animal Health 16 (2004): p.186-196.
Klingeman, Peter C.. Synopsis report. A resource survey of river energy and low-head hydroelectric power potential in Oregon. In WRRI. Vol. no.61. Corvallis, OR: Water Resources Research Institute, 1979.
Kan, Ting T.. Systematics, Variation, Distribution, and Biology of Lampreys of the Genus Lampetra in Oregon. Ph. D. ed. Corvallis, Or.: Oregon State University, 1975.
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Stoevener, Herbert H., Joseph B. Stevens, and Howard F. Horton. Technical and economic issues in the water quality management in Yaquina Bay In The Proceedings of the Second Annual Technical Conference on Estuaries of the Pacific Northwest. Corvallis, Or.: Oregon State University, Engineering Experiment Station, 1972.
U.S. Army. Corps of Engineers. Technical Appendices for Draft Environmental Impact Statement. Operation and Maintenance of the Channels and Breakwaters in Yaquina Bay and River. Portland, Or., 1975.
Power, James H., Steven L. Johnson, and Derek Wilson. "A telemetry study of downstream coho smolt movement in the Yaquina River and estuary [abstract only]." American Fisheries Society. Oregon Chapter. Meeting & Symposium. Annual meeting & symposium (2005): 80-81.
Oregon. State Board of Fish Commissioners. Third and Fourth Annual Reports to the Governor, 1889-1890., 1891.
Brophy, Laura S., Deborah A. Reusser, Christopher N. Janousek, Green Point Consulting, U.S. Geological Survey, and U.S.Environmental Protection Agency. Tidal wetlands of the Yaquina and Alsea River estuaries, Oregon: Geographic Information Systems layer development and recommendations for National Wetlands Inventory revisions In Open-File Report (Geological Survey (U.S.)). Vol. no.2012–1038. Reston, Va.: U.S. Geological Survey, 2013.

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