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2012
Miller, Aileen Kilpatrick. Site Selection by Migratory Shorebirds in Oregon Estuaries Over Broad and Fine Spatial Scales. M. S. ed. Portland, Or.: Portland State University, 2012.
→ pdxscholar.library.pdx.edu/open_access_etds/443/
Anonymous. Steamboats of Yaquina Bay and Yaquina River [web page]. Vol. 2013., 2012.
→ en.wikipedia.org/wiki/Steamboats_of_Yaquina_Bay_and_Yaquina_River
Komar, Paul D., Jonathan C. Allan, and Peter Ruggiero. "U.S. Pacific Northwest coastal hazards: tectonic and climate controls." In Coastal Hazards. Vol. 6. Coastal Research Library 6. Dordrecht Netherlands: Springer Science Media, 2012.
U.S. Army Corps of Engineers. Portland District, and U.S. Environmental Protection Agency. Region 10. Yaquina Bay, Oregon: Ocean Dredged Material Disposal Sites Evaluation Study and Environmental Assessment. Portland, Or.: U.S. Army Corps of Engineers, Portland District, 2012.
→ tethys.pnnl.gov/sites/default/files/publications/USACE%20and%20EPA%202012.pdf
2011
Dumbauld, Brett R., John W. Chapman, Mark E. Torchin, and Armand M. Kuris. "Is the collapse of mud shrimp (Upogebia pugettensis) populations along the Pacific Coast of North America caused by outbreaks of a previously unknown bopyrid isopod parasite (Orthione griffenis)?" Estuaries and Coasts 34 (2011): 336-350.
Hessing-Lewis, Margot. Eelgrass-Macroalgae Interactions: Context-Dependency in Upwelling-Influenced Estuaries. Ph. D. ed. Corvallis, Or.: Oregon State University, 2011.
→ ir.library.oregonstate.edu/concern/graduate_thesis_or_dissertations/mp48sg67r
Brown, Cheryl A., Darrin Sharp, Heejun Chang, and Madeline Steele. Effects of climate change on water quality in the Yaquina Estuary, Oregon [PowerPoint presentation] In The Oregon Water Conference 2011: Evaluating and Managing Water Resources in a Climate of Uncertainty., 2011.
→ ir.library.oregonstate.edu/concern/conference_proceedings_or_journals/d217qq309
Brown, Cheryl A., and James H. Power. "Historic and recent patterns of dissolved oxygen in the Yaquina Estuary (Oregon, USA): Importance of anthropogenic activities and oceanic conditions." Estuarine, Coastal and Shelf Science 92 (2011): p.446-455.
Stick, David A.. Identification of Optimal Broodstock for Pacific Northwest Oysters. Ph. D. ed. Corvallis, Or.: Oregon State University, 2011.
→ ir.library.oregonstate.edu/concern/graduate_thesis_or_dissertations/g732dc75z
Important Bird Areas in the United States. Site report: Yaquina Bay., 2011.
→ netapp.audubon.org/iba/Reports/2583
Hatfield Marine Science Center, and Oregon State University. Joint Permit Application to Stabilize Portion of Yaquina Bay Shoreline at Hatfield Marine Science Center (area of erosion along eastern edge of HMSC property). Newport, Or.: Hatfield Marine Science Center, 2011.
→ ir.library.oregonstate.edu/concern/administrative_report_or_publications/6682x4405
Eardley, Christopher S., Flaxen D. L. Conway, Oregon State University. Sea Grant College Program, and National Sea Grant College Program(U.S.). Oregon’s Non-Consumptive Recreational Ocean User Community : Understanding an Ocean Stakeholder In ORESU-S. Vol. no.11-001. Corvallis, Or.: Oregon Sea Grant, 2011.
→ seagrant.oregonstate.edu/sites/seagrant.oregonstate.edu/files/sgpubs/onlinepubs/s11001.pdf
Komar, Paul D., Jonathan Allan, and Peter Ruggiero. "Sea level variations along the U.S. Pacific Northwest Coast: tectonic and climate controls." Journal of Coastal Research 27 (2011): p.808-823.
Lamberson, Janet O., Melanie R. Frazier, Walter G. Nelson, Patrick J. Clinton, and U.S. Environmental Protection Agency. Western Ecology Division. Utilization Patterns of Intertidal Habitats by Birds in Yaquina Estuary, Oregon. Vol. EPA/600/R-11/118. Newport, Or., 2011.
→ cfpub.epa.gov/si/si_public_file_download.cfm?p_download_id=503895&Lab=NHEERL
2010
van Staveren, John, Amy Hawkins, Craig Tumer, Dale Groff, Gregg Lomnicky, and Pacific Habitat Services Inc.. Biological Assessment and Essential Fish Habitat Assessment for the Construction of NOAA's Marine Operations Center-Pacific in Newport, Oregon (Township 11 South, Range 11 West, and Section 17 6th field HUC 171002040303). Wilsonville, Or.: Pacific Habitat Services, Inc., 2010.
→ ir.library.oregonstate.edu/concern/technical_reports/t722h939f
Ferraro, Steven P., and Faith A. Cole. "Ecological periodic tables for nekton usage of four US Pacific Northwest estuarine habitats." Canadian Journal of Fisheries and Aquatic Sciences 67 (2010): p.1957-1967.
U.S. Army. Corps of Engineers, and National Marine Fisheries Services. Northwest Region. Endangered Species Act Biological Opinion and Magnuson-Stevens Fishery Conservation and Management Act Essential Fish Habitat Conservation Recommendations for the NOAA Marine Operations Center-Pacific Relocation Yaquina Bay (6th field HUC 171002040303)...., 2010.
→ ir.library.oregonstate.edu/concern/technical_reports/8336h225g
Woods, Pamela J.. "Geographic variation in lower pharyngeal jaw morphology in the Shiner Perch Cymatogaster aggregata (Embiotocidae, Teleostei)." Environmental Biology of Fishes 88 (2010): p.153-168.
O'Higgins, Timothy G., Steven P. Ferraro, Darrin D. Dantin, Steve J. Jordan, and Marnita M. Chintala. "Habitat scale mapping of fisheries ecosystem service values in estuaries." Ecology and Society 15 (2010): article 7.
→ www.ecologyandsociety.org/vol15/iss4/art7/
Ruggiero, Peter, Cheryl A. Brown, Paul D. Komar, Jonathan C. Allan, Deborah A. Reusser, and Henry Lee II. "Impacts of climate change on Oregon’s coasts and estuaries." In Oregon Climate Assessment Report, edited by Kathie Dello and Philip W. Mote, p.211-268. Corvallis, Or.: Oregon State University. College of Oceanic and Atmospheric Sciences. Oregon Climate Change Research Institute,, 2010.
→ digital.osl.state.or.us/islandora/object/osl%3A637577
Buncic, Michael. Interannual Differences in the Estuarine Ghost Shrimp, Neotrypaea californiensis.. M.S. ed. San Jose, Calif.: San Jose State University, 2010.
→ scholarworks.sjsu.edu/etd_theses/3749/
Port of Newport, and Pacific Habitat Services. Joint Permit Application [NOAA Marine Operations Center - Pacific Relocation]., 2010.
→ ir.library.oregonstate.edu/concern/technical_reports/00000038x
Yamada, Sylvia Behrens, and Michael P. Kosro. "Linking ocean conditions to year class strength of the invasive European green crab, Carcinus maenas." Biological Invasions 12 (2010): p.1791-1804.
Young, David R., Patrick J. Clinton, and David T. Specht. "Mapping intertidal eelgrass (Zostera marina L.) in three coastal estuaries of the Pacific Northwest USA using false colour near-infrared aerial photography." International Journal of Remote Sensing. 31 (2010): p.1699-1715.
Boedeker, Christian, and Gayle I. Hansen. "Nuclear rDNA sequences of Wittrockiella amphibia (Collins) comb. nov. (Cladophorales, Chlorophyta) and morphological characterization of the mat-like growth form." Botanica Marina 53 (2010): p.351-356.

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