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Specht, David T.. The use of standardized marine algal bioassays for nutrient assessment of Oregon coastal estuaries In The Proceedings of the Fourth Annual Technical Conference on Estuaries of the Pacific Northwest. Vol. no.60. Circular (Oregon State University. Engineering Experiment Station) no.60. Corvallis, OR: Oregon State University Engineering Experiment Station, 1974.
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Giannico, Guillermo R., and Jon A. Souder. Tide gates in the Pacific Northwest: operation, types, and environmental effects In ORESU-T. Vol. no.05-001. Corvallis, Or.: Sea Grant Oregon, Oregon State University , 2005.
Brophy, Laura S., Deborah A. Reusser, Christopher N. Janousek, Green Point Consulting, U.S. Geological Survey, and U.S.Environmental Protection Agency. Tidal wetlands of the Yaquina and Alsea River estuaries, Oregon: Geographic Information Systems layer development and recommendations for National Wetlands Inventory revisions In Open-File Report (Geological Survey (U.S.)). Vol. no.2012–1038. Reston, Va.: U.S. Geological Survey, 2013.
Brophy, Laura S., and Michael J. Ewald. Tidal Wetland Landward Migration Zones (LMZs) for 4.7 Ft Sea Level Rise for the Yaquina Bay Estuary [cartographic material]. Corvallis, Or.: Institute for Applied Ecology, 2017.
Weilhoefer, Christine L., Walter G. Nelson, and Patrick J. Clinton. "Tidal channel diatom assemblages reflect within wetland environmental conditions and land use at multiple scales." Estuaries and Coasts 38, no. 2 (2015): p.534-545.
Schwartzkopf, Brittany D., Alison D. Whitman, Amy J. Lindsley, and Scott A. Heppell. "Temporal and habitat differences in the juvenile demersal fish community at a marine-dominated northeast Pacific estuary." Fisheries Research 227 (2020): 11 p.
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Kumler, Marion Lawrence. Succession and Certain Adaptive Features of Plants Native to the Sand Dunes of the Oregon Coast. Ph. D. ed. Corvallis, Or.: Oregon State University, 1963.
Moore, Wendy W., and David C. McIntire. "Spatial and seasonal distribution of littoral diatoms in Yaquina estuary, Oregon (USA)." Botanica Marina 20 (1977): p.99-109.
Frey, Bruce E., Fritz G. Riedel, Ann E. Bass, and Lawrence F. Small. "Sensitivity of estuarine phytoplankton to hexavalent chromium." Estuarine, Coastal and Shelf Science 17 (1983): p.181-187.
Kulm, Laverne D., and John V. Byrne. Sediments of Yaquina Bay, Oregon In Estuaries [conference papers], Edited by George(ed.) H. Lauff. Vol. 83. Conference on Estuaries, Jekyll Island, 1964 83. Washington, D.C.: American Association for the Advancement of Science, 1967.
Burreson, Eugene M., and Robert E. Olson. "Seasonal variations in the populations of two hemiurid trematodes from the pacific staghorn sculpin Leptocottus armatus Girard, in an Oregon estuary." Journal of Parasitology 60 (1974): p.764-767.
Crandell, George F.. Seasonal and Spatial Distribution of Harpacticoid Copepods in Relation to Salinity and Temperature in Yaquina Bay, Oregon. Ph. D. ed. Corvallis, Or.: Oregon State University, 1967.
Adamus, Paul R.. Science Review and Data Analysis for Tidal Wetlands of the Oregon Coast. Part 2 of a Hydrogeomorphic Guidebook. Report to Coos Watershed Association, US Environmental Protection Agency, and Oregon Dept. of State Lands, Salem., 2005.

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