Chapman, John W., Jingchun Li, Michael F. McGowan, Ralph A. Breitenstein, Ralph Appy, Kathryn A. Hieb, Christina N. Piotrowski, and Leanne E. Elder. "A doubled down invasion of the northeast Pacific by the Asian mud shrimp, Upogebia major, and its coevolved bopyrid isopod parasite, Orthione griffenis." Aquatic Invasions 16 (2021): p.721-749.

Schwartzkopf, Brittany D., Alison D. Whitman, Amy J. Lindsley, and Scott A. Heppell. "Temporal and habitat differences in the juvenile demersal fish community at a marine-dominated northeast Pacific estuary." Fisheries Research 227 (2020): 11 p.

Hayduk, Jennifer L., Sally D. Hacker, Jeremy S. Henderson, and Fiona Tomas. "Evidence for regional?scale controls on eelgrass (Zostera marina) and mesograzer community structure in upwelling?influenced estuaries." Limnology and Oceanography 64 (2019): p.1120-1134.

Nelson, Walter G., and Gary Sullivan. "Effects of microtopographic variation and macroalgal cover on morphometrics and survival of the annual form of eelgrass (Zostera marina)." Aquatic Botany 145 (2018): p.37-44.

McClees, Whitney, and Catherine de Rivera. The limitation of spread of non-native marine invertebrates from artificial structures to natural habitats [poster] In ESM Colloquium. Vol. 2017. The limitation of spread of non-native marine invertebrates from artificial structures to natural habitats [poster] 2017. Portland, Or.: Portland State University.  Environmental Science & Management Department. , 2017.

Lindsley, Amy J.. Juvenile Rockfish (<i>Sebastes spp.) Community Composition and Habitat use of Yaquina Bay, Oregon</i>. M.S. ed. Corvallis, Or.: Oregon State University, 2016.

Mach, Megan E., Sandy Wyllie-Echeverria, and Kai M. A. Chan. "Ecological effect of a nonnative seagrass spreading in the Northeast Pacific: A review of Zostera japonica." Ocean & Coastal Management 102 (2014): p. 375-382.

Castillo, Gonzalo C.. Benthic Biological Invasions in Two Temperate Estuaries and Their Effects on Trophic Relations of Native Fish and Community Stability. Ph. D. ed. Corvallis, Or.: Oregon State University, 2000.

McMurray, Gregory R., and Robert J. Bailey. Change in Pacific Northwest coastal ecosystems: proceedings of the Pacific Northwest Coastal Ecosystems Regional Study Workshop In NOAA Coastal Ocean Program Decision Analysis Series. Vol. no.11. NOAA Coastal Ocean Program Decision Analysis Series no.11. Troutdale, Or.: NOAA Coastal Ocean Office, 1998.

Smith, Matthew D., and Christopher J. Langdon. "Manila clam aquaculture in shrimp-infested mudflats." Journal of Shellfish Research 17 (1998): 223-229.

Bottom, Daniel L., James A. Lichatowich, and Christopher A. Frissell. "Variability of Pacific Northwest marine ecosystems and relation to salmon production." In Change in Pacific Northwest coastal ecosystems: proceedings of the Pacific Northwest Coastal Ecosystems Regional Study Workshop., edited by Gregory R. McMurray and Robert J. Bailey, p.181-252. Vol. no.11. NOAA Coastal Ocean Program Decision Analysis Series no.11. Troutdale, Or.: NOAA Coastal Ocean Office, 1998.

Wissmar, Robert C., and Charles A. Simenstad. Variability of riverine and estuarine ecosystem productivity for supporting Pacific salmon In Change in Pacific Northwest coastal ecosystems: proceedings of the Pacific Northwest Coastal Ecosystems Regional Study Workshop., Edited by Gregory R. McMurray and Robert J. Bailey. Vol. no.11. NOAA Coastal Ocean Program Decision Analysis Series no.11. Troutdale, Or.: NOAA Coastal Ocean Office, 1998.

Chapman, Peter M., Brian Anderson, Scott Carr, Virginia Engles, Roger Green, Jawed Hameedi, Michelle Harmon, Pamela Haverland, Jeff Hyland, Chris Ingersoll et al. "General guidelines for using the sediment quality triad." Marine Pollution Bulletin 34 (1997): 368-372.

Robinson, Anja M.. Molluscan fisheries in Oregon: past, present, and future In The history, present condition, and future of the molluscan fisheries of North and Central America and Europe: Volume 2, Pacific Coast and supplemental topics, Edited by Clyde Jr. L. MacKenzie, Victor Jr. G. Burrell, Aaron Rosenfield and WIllis L. Hobart. NOAA Technical Report NMFS. U.S. Department of Commerce, 1997.

Osis, Vicki, Brady Philips, and Amy Martin. Why Protect Yaquina Bay?., 1997.

U.S. Department of the Interior. Siuslaw National Forest. Alsea Ranger District. Big Elk Watershed Analysis. Alsea, Or.: Alsea Ranger District, Siuslaw National Forest, 1995.

Trowbridge, Cynthia D.. "Defensive responses and palatability of specialist herbivores: Predation on NE Pacific ascoglossan gastropods." Marine Ecology Progress Series 105 (1994): 61-70.

Douillet, Philippe, and Christopher J. Langdon. "Effect of marine bacteria on the culture of axenic oyster Crassostrea gigas (Thunberg) larvae." Biological Bulletin 184 (1993): 36-51.

Oregon. Dept. of Fish and Wildlife. Yaquina River Basin Fish Management Plan. Newport, Or.: Oregon Department of Fish and Wildlife, 1991.

U.S. Forest Service. Pacific Northwest Region. Final Environmental Impact Statemaent: Land and Resource Management Plan: Siuslaw National Forest. [Portland, Or,]: U.S. Department of Agriculture, Forest Service, Pacific Northwest Region, 1990.

DeBen, Waldemar A., William D. Clothier, George R. Ditsworth, and Donald J. Baumgartner. "Spatio-temporal fluctuations in the distribution and abundance of demersal fish and epibenthic crustaceans in Yaquina Bay, Oregon." Estuaries 13 (1990): 469-478.

Chapman, John W.. "Invasions of the Northeast Pacific by Asian and Atlantic gammaridean amphipod crustaceans, including a new species of Corophium." Journal of Crustacean Biology 8 (1988): 364-382.

Faxon, Darrel. "Immature bald eagle captures gull." Oregon Birds 13 (1987): 34.

Bayer, Range D.. "Winter observations of bald eagles in Yaquina estuary, Oregon." The Murrelet 68 (1987): p.39-44.

Savidge, William B.. Factors Affecting the Rates of Infaunal Recolonization of Small-Scale Disturbance on the Intertidal Sandflat. M.S. ed. Corvallis, Or.: Oregon State University, 1986.

Bayer, Range D.. "Fledging common murre killed and abandoned by a gull after leaving the vicinity of the colony." The Murrelet 67 (1986): p.30-31.

Bayer, Range D.. "Seabirds near an Oregon estuarine salmon hatchery in 1982 and during the 1983 El Nino." Fishery Bulletin 84 (1986): p.279-286.

Bayer, Range D.. "Bill length of herons and egrets as an estimator of prey size." Colonial Waterbirds 8 (1985): p.104-109.

Bayer, Range D.. "Interactions of great blue herons and gulls." Wilson Bulletin 97 (1985): p.538-541.

Zirges, Malcolm H., and Oregon. Dept. of Fish and Wildlife. Shrimp Assessment. Annual Report. October 1, 1983 to September 30, 1984. U.S. National Marine Fisheries Service, 1985.

Phillips, Ronald C., National Coastal Ecosystems Team(U.S.), and United States. Army. Corps of Engineers. The ecology of eelgrass meadows of the Pacific Northwest:  A community profile In FWS/OBS. Vol. no.84/24. United States Fish and Wildlife Service, 1984.

Bayer, Range D.. "Notes on the feeding behavior of gulls and crows at the Yaquina estuary, Oregon." Western Birds 15 (1984): p.35-36.

Bayer, Range D.. "Birds associated with California sea lions at Yaquina estuary, Oregon." The Murrelet 64 (1983): p.48-51.

Simenstad, Charles A., and National Coastal Ecosystems Team. The ecology of estuarine channels of the Pacific Northwest coast: a community profile In FWS/OBS. Vol. no.83/05. Washington, D.C.: U.S. Department of the Interior.  Fish and Wildlife Service, 1983.

Davis, Michael W., and Henry II. Lee. "Recolonization of sediment-associated microalgae and effects of estuarine infauna on microalgal production." Marine Ecology:  Progress Series 11 (1983): p.227-232.

Sullivan, Michael J.. "Distribution of edaphic diatoms in a Mississippi salt marsh: A canonical correlation analysis." Journal of Phycology 18 (1982): 130-133.

Cardon, Nanette C.. Effect of Nutrient Enrichment on Marine Benthic Diatoms in Yaquina Bay, Oregon. M.S. ed. Vol. M. S. Corvallis, Or.: Oregon State Universuty, 1981.

Davis, Michael W., and David C. McIntire. "Production dynamics of sediment-associated algae in two Oregon estuaries." Estuaries 4 (1981): p.301.

Bayer, Range D.. "Shallow-water intertidal ichthyofauna of the Yaquina estuary, Oregon." Northwest Science 55 (1981): p.182-193.

Bayer, Range D.. "Birds feeding on herring eggs at the Yaquina estuary, Oregon." Condor 82 (1980): p.193-198.

Frey, Bruce E., and Lawrence F. Small. "Effects of micro-nutrients and major nutrients on natural phytoplankton populations." Journal of Plankton Research 2 (1980): p.1-22.

Donaghay, Percy L.. Experimental and Conceptual Approaches to Understanding Algal-Grazer Interactions. Ph. D. ed. Corvallis, Or.: Oregon State University, 1980.

Myers, Katherine W.. An Investigation of the Utilization of Four Study Areas in Yaquina Bay, Oregon by Hatchery and Wild Juvenile Salmonids. M.S. ed. Corvallis, Or.: Oregon State University, 1980.

Swartz, Richard C., Waldemar A. DeBen, Faith A. Cole, and L. C. Bentsen. "Recovery of the macrobenthos at a dredge site in Yaquina Bay, Oregon." In Contaminants and Sediments, p.391-408. Vol. 2. Ann Arbor, Mich.: Ann Arbor Science, 1980.

Bayer, Range D.. "Bald eagle-great blue heron interactions." The Murrelet 60 (1979): p.32-33.

Bayer, Range D.. "Great blue heron attacks horned grebe." Bird-Banding: A Journal of Ornithological Investigation 50 (1979): p.264-265.

Carlton, James T.. History, Biogeography, and Ecology of the Introduced Invertebrates of the Pacific Coast of North America. Ph. D. ed. Davis, California: University California, Davis, 1979.

Bayer, Range D.. Intertidal Shallow-Water Fishes and Selected Macroinvertebrates in the Yaquina Estuary, Oregon., 1979.

Bayer, Range D.. "Intertidal zonation of Zostera marina in the Yaquina estuary, Oregon." Syesis 12 (1979): p.147-154.

Barton, Michael G.. Influence of Temperature and Salinity on the Adaptation of <i>Anoplarchus purpurescens and Pholis ornata to an Intertidal Habitat</i>. Ph. D. ed. Corvallis, Or.: Oregon State University, 1978.

Bayer, Range D.. Intertidal Zonation of Two <i>Zostera species at the Yaquina Estuary, Oregon</i>., 1978.

Frenkel, Robert E., Theodore Boss, and Reid S. Schuller. Transition Zone Vegetation between Intertidal Marsh and Upland in Oregon and Washington. Corvallis, Or.: Geography Department, Oregon State University, 1978.

Werner, Dietrich(ed.). The Biology of Diatoms In Botanical Monographs. Vol. 13. Blackwell Scientific Publications, 1977.

Bayer, Range D., and Yaquina Birders. Birds of Lincoln County, Oregon. Newport, Or.: Sea Grant Marine Advisory Program, 1977.

Karentz, Deneb, and David C. McIntire. "Distribution of diatoms in the plankton of Yaquina estuary, Oregon." Journal of Phycology 13 (1977): p.379-388.

MacDonald, Keith B.. "Plant and animal communities of Pacific North American salt marshes." In Wet Coastal Ecosystems, edited by (ed.) V. J. Chapman, p.167-191. Vol. 1. Ecosystems of the World 1. New York, NY: Elsevier Scientific , 1977.

Karentz, Deneb. The Distribution of Planktonic Diatoms in Yaquina Estuary, Oregon. M.S. ed. Corvallis, Or.: Oregon State University, 1975.

Deason, Ellen Elizabeth. An <i>In-Situ Experiment on the Effects of Zooplankton Grazing and Nutrient Regeneration on the Phytoplankton of Yaquina Bay, Oregon</i>. M.S. ed. Corvallis, Or.: Oregon State University, 1975.

Jefferson, Carol A.. Plant Communities and Succession in Oregon Coastal Salt Marshes. Ph. D. ed. Corvallis, Or.: Oregon State University, 1975.

Swartz, Richard C., Waldemar A. DeBen, and A. J. McErlean. Comparison of species diversity and faunal homogeneity indices as criteria of change in biological communities In Proceedings of Seminar on Methodology for Monitoring the Marine Environment, Edited by S. S. Verner. Proceedings of Seminar on Methodology for Monitoring the Marine Environment. U. S. Environmental Protection Agency, 1974.

Main, Stephen P., and David C. McIntire. "The distribution of epiphytic diatoms in Yaquina Bay, Oregon (USA)." Botanica Marina 17 (1974): p.88-99.

O'Connors, Harold Jr. B.. Feeding Behavior of Two Populations of the Estuarine Copepod <i>Acartia clausii</i>. Ph. D. ed. Corvallis, Or.: Oregon State University, 1974.

Pearcy, William G., and Sharon S. Myers. "Larval fishes of Yaquina Bay, Oregon:  a nursery ground for marine fishes?" Fishery Bulletin 72 (1974): p.201-213.

Atkins, Glenn J., Carol A. Jefferson, and Oregon. Coastal Conservation and Development Commission. Coastal Wetlands of Oregon:  A Natural Resource Report. Florence, Or.: Oregon Coastal Conservation and Development Commission, 1973.

McIntire, David C.. "Diatom associations in Yaquina estuary, Oregon:  a multivariate analysis." Journal of Phycology 9 (1973): p.254-259.

Riznyk, Raymond Z.. "Interstitial diatoms from two tidal flats in Yaquina estuary, Oregon, USA." Botanica Marina 16 (1973): p.113-138.

Main, Stephen P.. The Distribution of Epiphytic Diatoms in Yaquina Estuary, Oregon. Ph. D. ed. Corvallis, Or,: Oregon State University, 1972.

Berglund, Lisette A.. Laboratory Studies of Successional Patterns in Assemblages of Attached Estuarine Diatoms. M.S. ed. Corvallis, Or.: Oregon State University, 1972.

Zimmerman, Steven T.. Seasonal Succession of Zooplankton Populations in Two Dissimilar Marine Embayments on the Oregon Coast. Ph. D. ed. Corvallis, Or.: Oregon State University, 1972.

Gonor, Jefferson J.. "Oregon coastal marine animals, their environmental temperatures and man's impact." In Man and Aquatic Communities; [Lectures], p.79-102. Vol. 012. SEMIN WR 012. Corvallis, Or.: Oregon State University, Water Resources Research Institute, 1970.

Martin, John V.. Salinity as a Factor Controlling the Distribution of Benthic Estuarine Diatoms. Ph. D. ed. Corvallis, Or.: Oregon State University, 1970.

McIntire, David C., and Barry L. Wulff. Ecological-Physiological Investigations of Littoral Diatom Communities of the Yaquina River Estuary, Oregon. National Science Foundation Research Grant GB-7203. Corvallis, Or.: Department of Botany and Plant Pathology, Oregon State University, 1969.

McCormick, Jon M.. Hydrographic and Trophic Relationships of Hydromedusae in Yaquina Bay, Oregon. Ph. D. ed. Corvallis, Or.: Oregon State University, 1968.

Estuaries In American Association for the Advancement of Science. Publication, Edited by George H. Lauff. Vol. no.83. Conference on Estuaries, Jekyll Island, 1964 no.83. Washington, D.C.: American Association for the Advancement of Science, 1967.

Markham, John C.. A Study of the Animals Inhabiting Laminarian Holdfasts in Yaquina Bay, Oregon. M.A. ed. Corvallis, Or.: Oregon State University, 1967.

Wiedemann, Alfred M.. Contributions to the Plant Ecology of the Oregon Coastal Sand Dunes In Dept. of Botany and Plant Pathology. Vol. Ph.D. Corvallis, Or.: Oregon State University, 1966.

Snow, C. Dale, Darrell Demory, Waldemar DeBen, and John R. Neilsen. Shellfish investigations:  April 1, 1964 - March 31, 1965 In Shellfish IInvestigations Progress Report. Vol. no.36. [Salem]: [Fish Commission of Oregon], 1966.

Russell, Howard Jamison Jr.. The Endemic Zooplankton Population as a Food Supply for Young Herring in Yaquina Bay. M.S. ed. Corvallis, Or.: Oregon State Universtiy, 1964.

Hansen, Henry P., and Ira S. Allison. "A  pollen study of a fossil peat  deposit on the Oregon coast." Northwest Science 16 (1942): p.86-92.