@article {80306,
	title = {Hatfield Marine Science Center Dynamic Revetment Project DSL permit $\#$ 45455-FP: Final Monitoring Report February, 2016},
	year = {2016},
	note = {This is the fifth and final document in a series of five annual reports concerning control of severe erosion along Yaquina Bay next to the Hatfield Marine Science Center. Parts of the shoreline were stabilized in 2007 and 2011.  Severe erosion in the unmodified Reference area led to extension of the dynamic revetment into the Reference area in 2015.  The 2015 work {\textquotedblleft}has largely stabilized shoreline erosion within the project area{\textquotedblright} (p.32). Concerns remain about the need for more gravel and high-water events, including king tides.  Aerial photograph, color photographs.},
	pages = {51 p.},
	institution = {Oregon State University. Hatfield Marine Science Center,},
	address = {Newport, Or.},
	keywords = {amphipods, aquatic invertebrates, beaches, benthos, coastal hazards, erosion, fish, Hatfield Marine Science Center, Pacific staghorn sculpin = Leptocottus armatus, physical, Shiner perch = Cymatogaster aggregate, species list, terrestrial vegetation, wave height data, Whitebait smelt = Allosmerus elongates, Yaquina Bay},
	url = {https://ir.library.oregonstate.edu/concern/administrative_report_or_publications/pn89d710t},
	author = {Cowen, Robert and Nelson, Walt and Arbuckle, Scarlett and Folger, Christina and Allan, Jonathan and Heppell Laboratory,}
}
@article {80301,
	title = {Hatfield Marine Science Center Dynamic Revetment Project DSL permit $\#$ 45455-FP: Monitoring Report, February 2015},
	year = {2015},
	note = {This is the fourth in a series of five annual reports concerning control of erosion along Yaquina Bay next to the Hatfield Marine Science Center. Parts of the shoreline were stabilized in 2007 and 2011.  Before more dynamic revetments will be permitted, a five-year study of nearby unmodified shorelines is required.  {\textquotedblleft}Monitoring of beach profiles indicated that as of January 2015, the 2011 Dynamic Revetment Project (DRP) has generally successfully stabilized the shoreline in the project area.  Beach profile data also indicated that the 2007 DRP continued to be successful in stabilizing further retreat of the shoreline.  . .  Rapid erosion has continued in the adjacent Reference beach area and over the period 2009-2015 has been as great as 11 m (36 ft).{\textquotedblright}(p.2) Aerial photograph, color photographs.},
	pages = {43 p.},
	institution = {Oregon State University. Hatfield Marine Science Center,},
	address = {Newport, Or.},
	keywords = {amphipods, aquatic invertebrates, beaches, benthos, chum salmon  = Oncorhynchus keta, coastal hazards, erosion, fish, Hatfield Marine Science Center, Pacific staghorn sculpin = Leptocottus armatus, physical, Shiner perch = Cymatogaster aggregate, species list, terrestrial vegetation, wave height data, Whitebait smelt = Allosmerus elongates, Yaquina Bay},
	url = {https://ir.library.oregonstate.edu/concern/administrative_report_or_publications/1z40kt28z},
	author = {Cowen, Robert and Nelson, Walt and Arbuckle, Scarlett and Folger, Christina and Allan, Jonathan and Heppell Laboratory,}
}
@article {76336,
	title = {Hatfield Marine Science Center Dynamic Revetment Report DSL Permit $\#$45455-FP Monitoring Report February, 2014 Report},
	year = {2014},
	note = {This is the third in a series of five annual reports concerning control of erosion along Yaquina Bay next to the Hatfield Marine Science Center. Parts of the shoreline were stabilized in 2007 and 2011. Before more dynamic revetments will be permitted, a five-year study of nearby unmodified shorelines is required. {\textquotedblleft}Monitoring of beach profiles indicated that as of December 2013, the 2011 Dynamic Revetment Project (DRP) has successfully stabilized the shoreline in the project area, while rapid erosion has continued in the adjacent Reference beach area. Erosion in the unprotected Reference area in the period 2009-2013 has been as great as 9.6 m (31.5 ft).{\textquotedblright} (from the Abstract) Aerial photograph, color photographs.},
	pages = {37 p.},
	institution = {Oregon State University. Hatfield Marine Science Center},
	address = {Newport, Or.},
	keywords = {amphipods, aquatic invertebrates, beaches, benthos, coastal hazards, Dungeness crab = Metacarcinus magister, erosion, fish, Hatfield Marine Science Center, Pacific staghorn sculpin = Leptocottus armatus, physical, Shiner perch = Cymatogaster aggregate, species list, terrestrial vegetation, wave height data, Whitebait smelt = Allosmerus elongates, Yaquina Bay},
	url = {https://ir.library.oregonstate.edu/concern/administrative_report_or_publications/cf95jb894},
	author = {Cowan, Robert and Nelson, Walt and Allan, Jonathan and Arbuckle, Scarlett and Heppell Laboratory, and Folger, Christina L.}
}
@article {76436,
	title = {Nursery Functions of U.S. West Coast Estuaries:  The State of Knowledge for Juveniles of Focal Invertebrate and Fish Species},
	year = {2014},
	note = {This report summarizes what is known about the role of estuaries as nurseries for important aquatic species. The authors inventoried 303 West Coast estuaries and categorized each by class (lagoonal, riverine, embayment and sound) and subclass (estuarine coastal subtidal, tidal channel/creek, slough and lagoon). They examined 15 different species that used estuaries and noted what is known and not known about their life cycles and use of estuaries. {\textquotedblleft}Together with the estuary inventory and the geodatabase, this report represents the first stage in a larger effort to better understand the nursery functions of West Coast estuaries for fish and invertebrates.{\textquotedblright} (p.3)},
	pages = {168 p.},
	institution = {The Nature Conservancy},
	address = {Arlington, Va.},
	keywords = {aquatic invertebrates, Bat stingray = Myliobatus californicus (Aetobatus californicus), Bay shrimp = Crangon franciscorum, Brown rockfish = Sebastes auriculatus, California halibut = Paralichthys californicus, Chinook salmon = Oncorhynchus tshawytscha, Coho salmon = Oncorhynchus kisutch, crustaceans, Dungeness crab =   Metacarcinus magister (Cancer magister), eelgrass = Zostera marina, English sole = Parophrys vetulus, estuaries, fishes, general, geographic distribution, Green sturgeon = Acipenser medirostris, habitats, juvenile fish, Leopard shark = Triakis semifasciata, life history information, Oregon, Pacific Coast, Pacific herring =  Clupea pallasi, Pacific staghorn sculpin = Leptocottus armatus, Shiner perch = Cymatogaster aggregate, Starry flounder = Platichthys stellatus, steelhead trout = Oncorhynchus mykiss},
	url = {https://www.scienceforconservation.org/products/nursery-functions-of-estuaries},
	author = {Hughes, Brent B. and Levey, Matthew D. and Brown, Jennifer A. and Fountain, Monique C. and Carlisle, Aaron B. and Litvin, Steven Y. and Greene, Correigh M. and Heady, Walter N. and Gleason, Mary G.}
}
@article {36206,
	title = {Hatfield Marine Science Center Dynamic Revetment Report DSL Permit $\#$45455-FP Monitoring Report February, 2013},
	year = {2013},
	note = {This is the second in a series of five annual reports concerning control of erosion along Yaquina Bay next to the Hatfield Marine Science Center.  Parts of the shoreline were stabilized in 2007 and 2011.  Before more dynamic revetments will be permitted, a five-year study of nearby unmodified shorelines is required.  {\textquotedblleft}Monitoring of beach profiles indicated that as of December 2012, the 2011 Dynamic Revetment Project (DRP) has successfully stabilized the shoreline in the project area, while rapid erosion has continued in the adjacent Reference beach area. Erosion in the unprotected Reference area in the period 2009-2012 has been as great as 9 m (29.5 ft).{\textquotedblright} (from the Abstract)  Aerial photograph, color photographs.},
	pages = {41 p.},
	institution = {Oregon State University. Hatfield Marine Science Center},
	address = {Newport, Or.},
	keywords = {American Coot = Fulica Americana, amphipods, aquatic invertebrates, beaches, benthos, birds, coastal hazards, erosion, fish, Hatfield Marine Science Center, Pacific staghorn sculpin = Leptocottus armatus, physical, Shiner perch = Cymatogaster aggregate, species list, terrestrial vegetation, wave height data, Western gull = Larus occidentalis, Yaquina Bay},
	url = {https://ir.library.oregonstate.edu/concern/administrative_report_or_publications/4x51hj35n},
	author = {Janet G Webster and Nelson, Walt and Allan, Jonathan and Stephensen, Shawn and Politano, Vincent and Folger, Christina L.}
}
@article {36201,
	title = {Hatfield Marine Science Center Dynamic Revetment Report DSL Permit $\#$45455-FP Monitoring Report February, 2012},
	year = {2012},
	note = {This is the first of a series of five annual reports concerning control of erosion along Yaquina Bay next to the Hatfield Marine Science Center.  Parts of the shoreline were stabilized in 2007 and 2011.  Before more dynamic revetments will be permitted, a five-year study of nearby unmodified shorelines is required.  {\textquotedblleft}A Dynamic Revetment (gravel beach) was installed in November, 2011 on the shoreline along the northeastern edge of the HMSC to mitigate erosion that threatened HMSC critical infrastructure. Shoreline topographic and biological monitoring was initiated before and continued after the project completion. Monitoring of beach profiles along the project area showed that a Dynamic Revetment installed in 2007 had been successful in stabilizing further retreat of the beach. As of January 2012, the2011 project also appears to have stabilized the shoreline, while rapid erosion has continued in the adjacent Reference beach area. {\textquotedblleft} (from the Abstract)  The report includes aerial photographs, charts and color photographs.},
	pages = {31 p.},
	institution = {Oregon State University. Hatfield Marine Science Center},
	address = {Newport, Or.},
	keywords = {American Coot = Fulica Americana, amphipods, aquatic invertebrates, beach wrack, beaches, benthos, birds, coastal hazards, erosion, fish, Hatfield Marine Science Center, Pacific staghorn sculpin = Leptocottus armatus, physical, Shiner perch = Cymatogaster aggregate, species list, terrestrial vegetation, wave height data, Yaquina Bay},
	url = {https://ir.library.oregonstate.edu/concern/administrative_report_or_publications/xd07gt292},
	author = {Boehlert, George and Nelson, Walt and Allan, Jonathan and Harris, Erica and Stephensen, Shawn and Politano, Vincent and Folger, Christina L.}
}
@article {33516,
	title = {Draft Oregon Coastal Juvenile Rockfish Study},
	year = {2000},
	note = {This paper describes a pilot project to develop a recruitment index for rockfish. Rockfish bear live young in the winter. "The larvae live in the plankton for three to five months before settling to the benthos, usually near some sort of structure."  Juvenile rockfish live in estuaries before migrating to the ocean. For this study, beach seines were conducted in the summer of 2000.  Boiler Bay had the most rockfish, followed by Yaquiina Bay. Shiner perch were the most abundant juvenile fish (5610) in Yaquina Bay. Black rockfish were the most abundant rockfish (402), and some copper rockfish (18) were also caught. },
	pages = {18 p.},
	institution = {Oregon Dept. of Fish and Wildlife. Marine Resources Division. Estuarine Habitat},
	keywords = {Black rockfish = Sebastes melanops, Boiler Bay, life history information, natural resource management, Rockfish = Sebastes spp., Salmon River Estuary, Seal Rock, Shiner perch = Cymatogaster aggregate, species list, Yaquina Bay, Yaquina River},
	url = {https://ir.library.oregonstate.edu/concern/defaults/p2676w099},
	author = {Appy, Marcus and Collson, P. J.}
}
@article {32486,
	title = {Distribution and Abundance of Fishes and Invertebrates in West Coast Estuaries},
	volume = {1-2},
	year = {1990},
	note = {v. 1. https://www.webapps.nwfsc.noaa.gov/assets/11/7710_08062014_124601_Monaco.et.al.1990-Emmett.-Hinton-VI.pdf   Data summaries  (ELMR report no.4, 1990)-- v. 2. https://repository.library.noaa.gov/view/noaa/2871 Species life history summaries (ELMR report no.8, 1991).  Gives relative abundance, salinity zone, life stage of residence in estuary, temporal distribution. Salmon runs delineated by season (Summer steelhead, etc.). Life history data given with bibliographies. },
	institution = {U.S. Dept. of Commerce, National Oceanic and Atmospheric Administration, National Ocean Service},
	address = {Rockville, Md.},
	keywords = {Bay shrimp = Crangon franciscorum, Chinook salmon = Oncorhynchus tshawytscha, chum salmon  = Oncorhynchus keta, Coho salmon = Oncorhynchus kisutch, cutthroat trout = Oncorhynchus clarki, Dungeness crab = Metacarcinus magister (Cancer magister), Green sturgeon = Acipenser medirostris, Jacksmelt = Atherinopsis californiensis, Lingcod = Ophiodon elongatus, Manila clam = Venerupis japonica, Northern anchovy = Engraulis mordax, Pacific herring =  Clupea pallasi, Pacific sand lance = Ammodytes hexapterus, Pacific smelt = Thaleichthys pacificus, Shad = Alosa sapidissima, Shiner perch = Cymatogaster aggregate, Softshell clam = Mya arenaria, steelhead trout = Oncorhynchus mykiss, Striped Bass = Morone saxatilis, Surf smelt = Hypomesus pretiosis, Three-spined stickleback = Gasterosteus aculeatus, White sturgeon = Acipenser transmontanus},
	url = {https://repository.library.noaa.gov/view/noaa/2871},
	author = {Monaco, Mark E. and Emmett, Robert L. and United States. National Ocean Service, and Estuarine Living Marine Resources Program (U.S.),}
}
