@article {83025,
	title = {Patterns of riparian policy standards in riverscapes of the Oregon Coast Range},
	journal = {Ecology and Society },
	volume = {24},
	number = {1},
	year = {2019},
	note = {This article examines fisheries management in the Oregon Coast Range from the point of view of the entire riverscape, in order to identify critical fish-bearing streams and regulatory gaps that have impacts on the fisheries. Portions of streams that fall under fisheries management plans, as well as those that are unregulated, are identified. There are gaps in protection for riparian areas in private forest lands, and particularly in agricultural lands.  An appendix identifies streams studied and percentages of stream length that fall under major fisheries management plans.  This is an open-access publication.},
	pages = {article 22, 19 p.},
	keywords = {agriculture, Coho salmon = Oncorhynchus kisutch, depleted populations, environmental law and policy, general, geographic information system, habitats, human impacts, logging, natural resource management, Oregon Coast, riparian areas},
	doi = {https://doi.org/10.5751/ES-10676-240122 },
	url = {https://www.ecologyandsociety.org/vol24/iss1/art22/ },
	author = {Boisjolie, Brett A. and Flitcroft, Rebecca L. and Santelmann, Mary V.}
}
@article {76376,
	title = {Sea Level Affecting Marshes Model (SLAMM)},
	year = {2014},
	note = {This is a technical document discussing how to use a computer program to model the effects of sea-level rise on native seagrass. {\textquotedblleft}Because of the ecological importance of SAV [submerged aquatic vegetation] habitats, U.S. EPA, USGS, and USDA partnered with Warren Pinnacle Consulting to enhance the SLAMM modeling software to include new functionality in order to predict changes in Zostera marina distribution within Pacific Northwest estuaries in response to sea level rise.{\textquotedblright} (from the Introduction)  The Yaquina River estuary and Willapa Bay are used as examples. While the emphasis of the document is on GIS, there are some good maps of Yaquina Bay. Clearly, a sea-level rise would have an impact on native seagrass distribution, with Zostera present in fewer areas.  The latest version of the tool can be found at:  https://coast.noaa.gov/digitalcoast/tools/slamm.html . 

 },
	pages = {50 p.},
	address = {Newport, Or.},
	keywords = {aquatic vegetation, bathymetry, climate change, eelgrass = Zostera marina, geographic information system, salt marsh, sea level, topography, Willapa Bay, Yaquina Bay},
	url = {https://warrenpinnacle.com/prof/SLAMM6/SLAMM_6.3_final_release.pdf},
	author = {Lee II, Henry and Reusser, Deborah A. and Frazier, Melanie R.. and McCoy, Lee M. and Patrick J Clinton and Clough, Jonathan S. and U.S. Environmental Protection Agency.  National Health and Environmental Effects Research Laboratory. Office of Research and Development. Western Ecology Division,}
}
@article {36491,
	title = {Tidal wetlands of the Yaquina and Alsea River estuaries, Oregon: Geographic Information Systems layer development and recommendations for National Wetlands Inventory revisions},
	volume = {no.2012{\textendash}1038},
	year = {2013},
	note = {{\textquotedblleft}Geographic Information Systems (GIS) layers of current, and likely former, tidal wetlands in two Oregon estuaries were generated by enhancing the 2010 National Wetlands Inventory (NWI) data with expert local field knowledge, Light Detection and Ranging-derived elevations, and 2009 aerial orthophotographs. Data were generated for two purposes: First, to enhance the NWI by recommending revised Cowardin et al. (1979) classifications for certain NWI wetlands within the study area; and second, to generate GIS data for the 1999 Yaquina and Alsea River Basins Estuarine Wetland Site Prioritization study{\textellipsis}.  The GIS products of this project improve the accuracy and utility of the NWI data, and provide useful tools for estuarine resource management.{\textquotedblright} (from the Abstract) Color maps.  Appendix A includes excellent color photographs of wetland sites and plants.  },
	pages = {60 p.},
	institution = {U.S. Geological Survey},
	address = {Reston, Va.},
	keywords = {Alsea Bay, Alsea River, Bain Slough, Boone Slough, Depot Slough, Drift Creek, Eckman Slough, geographic information system, hydrography, Idaho Flats, Lint Slough, maps, McCaffery Slough, Nute Slough, Olalla Slough, Pooles Slough, Risley Creek, salinity, salt marsh, wetland delineation, wetland vegetation, wetlands, Yaquina Bay, Yaquina River},
	url = {https://pubs.usgs.gov/of/2012/1038/pdf/ofr2012-1038.pdf},
	author = {Brophy, Laura S. and Reusser, Deborah A. and Janousek, Christopher N. and Green Point Consulting, and U.S. Geological Survey, and U.S.Environmental Protection Agency,}
}
@article {34426,
	title = {Mapping intertidal eelgrass (<i>Zostera marina</i> L.) in three coastal estuaries of the Pacific Northwest USA using false colour near-infrared aerial photography},
	journal = {International Journal of Remote Sensing.},
	volume = {31},
	number = {7},
	year = {2010},
	note = {Describes a technique for mapping seagrass beds from aerial photography. Includes maps showing Zostera marina beds in Yaquina, Umpqua and Coos estuaries. Yaquina Bay beds were photographed April 9, 2004. },
	pages = {p.1699-1715},
	keywords = {biological, Coos Bay, eelgrass=Zostera marina, geographic information system, Idaho Flats, Lower Yaquina River, map, Umpqua River estuary, Upper Yaquina River, Yaquina Bay, Yaquina River},
	doi = {10.1080/01431160902926590},
	author = {Young, David R. and Patrick J Clinton and Specht, David T.}
}
@article {34321,
	title = {Recommended NWI Revisions and GIS Layer Development for Tidal Wetlands of the Yaquina and Alsea River Estuaries},
	year = {2010},
	note = {"Prepared for U.S. Geological Survey, Western Fisheries Research Center" Summarizes work done to generate a GIS dataset on tidal wetlands in the Yaquina and Alsea estuaries, updates a 1999 report prioritizing sites for conservation in the two estuaries, and recommends revisions to the National Wetlands Inventory of wetlands in the study area.},
	month = {2010, Jul.},
	pages = {14 p.},
	institution = {Green Point Consulting},
	address = {Corvallis, Or.},
	keywords = {Alsea Bay, Alsea River, aquatic vegetation, Bayview Oxbow, Boone Slough, Depot Slough, Drift Creek, Eckman Lake, geographic information system, habitat restoration, Lint Slough, McCaffery Slough, Nute Slough, Olalla Slough, Poole Slough, salt marsh, Starr Creek, terrestrial vegetation, wetlands, Yaquina Bay},
	url = {https://ir.library.oregonstate.edu/concern/defaults/n870zx01m},
	author = {Brophy, Laura S. and Green Point Consulting,}
}
@article {51316,
	title = {Oregon Explorer: Natural Resources Digital Library},
	year = {2007},
	note = {Began in June 2007.  "The Oregon Explorer is envisioned to use the power of today{\textquoteright}s cutting edge information technology to create a state-of-the-art web-accessible natural resources digital library by way of accessing and integrating data from state and federal agencies, local governments, university scientists and citizens to support informed decisions and actions by people concerned with Oregon{\textquoteright}s natural resources and environment." (Vision) An invaluable resource.},
	address = {Corvallis, Or.},
	keywords = {climate change, demographics, environmental policy and law, general ecosystem description, geographic information system, geography, habitat conservation, hydrology, land use, maps, natural resources, wetlands},
	url = {https://oregonexplorer.info/ },
	author = {Oregon State University. Libraries, and Oregon State University. Institute for Natural Resources,}
}
@article {33591,
	title = {Oregon Coastal Atlas},
	number = {8/21/07},
	year = {2000},
	keywords = {Alsea Bay Estuary, birds, Chetco River estuary, coastal hazards, Coos Bay estuary, Coquille River estuary, Depoe Bay Estuary, erosion, estuaries, geographic information system, landslides, Necanicum River estuary, Nehalem River estuary, Nestucca Bay Estuary, Netarts Bay Estuary, Rogue River estuary, Salmon River Estuary, Sand Lake Estuary, Siletz Bay Estuary, Siuslaw estuary, Sixes River estuary, Tillamook Bay Estuary, tsunamis, Umpqua River estuary, Yaquina Bay Estuary},
	url = {https://www.coastalatlas.net/index.php}
}
@booklet {33391,
	title = {Midcoast watershed information system},
	year = {1998},
	note = {Guin QH 541.5 .E8 M391 1998 CD},
	type = {CD Rom},
	keywords = {Alsea River estuary, Beaver Creek estuary, computer programs, geographic information system, physical, Salmon  River estuary, Siletz River estuary, Yachats River estuary, Yaquina Bay, Yaquina River, Yaquina River Basin}
}
@proceedings {33446,
	title = {Use of color infrared aerial photography to map distribution of eelgrass and green macroalgae in a non-urbanized estuary of the Pacific Northwest U.S.A.},
	year = {1998},
	note = {Meeting held October 5-7, 1998.},
	pages = {P.II-37 - II-45},
	publisher = {ERIM International Inc.},
	address = {San Diego, Calif.},
	keywords = {biological, eelgrass=Zostera marina, Enteromorpha species, geographic information system, Idaho Flats, Lower Yaquina River, Ulva species, Upper Yaquina River, Yaquina Bay, Yaquina River},
	isbn = {10663711},
	author = {Young, David R. and Specht, David T. and Patrick J Clinton and Lee, Henry II.}
}
@article {51361,
	title = {United States Department of Agriculture Aerial Photographs of Linn, Benton, and Lincoln Counties, Oregon, 1972-1994 (bulk 1994)},
	year = {1994},
	note = {Covers 1972-1994.  These are aerial photographs assembled and used by the USDA field office in Tangent, Oregon for soil conservation and other purposes. The photographs were made by the National Aerial Photography Program. For 1994, the collection includes detailed index maps and large (24x24 inch prints) as well as smaller (10x10 inch) photo proofs. Index maps are also available for the 1990 and 1985 photographs. The 1985 images only include Lincoln County. For all other years, there are no indexes available and all of the images are 9x9 inch or 10x10 inch photo proofs. However, a small subset of the 1972 images have descriptions of the locations depicted in the photographs and the collection includes one 24x24 inch print of the 1972 flights.  The OSU Libraries has an historical aerial photograph collection with images primarily of the Willamette Valley and western Oregon taken in the mid-1930s through 1970s. Current aerial photographs are available through the University of Oregon Libraries Aerial Photography Collection and Research Service and the Oregon Imagery Explorer http://oregonexplorer.info/imagery .},
	keywords = {aerial photography, geographic information system, Lincoln County (Or.)},
	author = {U.S. Department of Agriulture. Economic Research Service,,}
}
@article {30581,
	title = {Application of Landsat-2 Data for an Inventory of Eelgrass and Kelp Beds on the Oregon Coast},
	year = {1978},
	month = {[1978]},
	institution = {Oregon State University},
	address = {Corvallis, Or.},
	keywords = {aquatic vegetation, brown algae, computer programs, Coos River estuary, eelgrass=Zostera marina, Enteromorpha species, Fucus species, general, geographic information system, grasses, green algae, kelp, Netarts estuary, Tillamook estuary, Yaquina Bay},
	author = {Murray, R. J.}
}
