@article {83184,
	title = {Larval development in the Pacific oyster and the impacts of ocean acidification : differential genetic effects in wild and domesticated stocks},
	journal = {Evolutionary Applications},
	volume = {14},
	year = {2021},
	note = {Oyster aquaculture contributes over $10 million yearly to the Oregon economy.  Most Oregon oyster growers cultivate the Pacific oyster, a non-native species.  In this article, the authors examine the capacity of the Pacific oyster to adapt to oceanic acidification.  The authors analyzed allele frequencies in wild (naturalized) and imported Pacific oysters in acidic waters. {\textquotedblleft}These results indicate the potential for a rapid adaptive response of oyster populations to OA conditions; however, underlying genetic changes associated with larval development differ between these wild and domesticated oyster stocks and influence their adaptive responses to OA conditions{\textquotedblright} (from the Abstract).  This article was reprinted in the Oregon Sea Grant reprint series ORESU-R as no.21-015.},
	pages = {p.2258-2272},
	keywords = {carbon dioxide, carbonic acid, climate, genetics, ocean acidification, Pacific oyster = Crassostrea gigas, Willapa Bay, Yaquina Bay Molluscan Broodstock Repository},
	doi = {10.1111/eva.13289},
	url = {https://ir.library.oregonstate.edu/concern/articles/4b29bd88m },
	author = {Durland, Evan and Pierre De Wit, and Meyer, Eli and Langdon, Christopher J.}
}
@mastersthesis {83154,
	title = {Ecosystem Functions of Pacific Northwest Estuaries: The Role of Ocean and Watershed Drivers in Eelgrass and Coho Salmon Dynamics},
	year = {2020},
	note = {This wide-ranging doctoral dissertation aims to {\textquotedblleft}investigate ocean and watershed dynamics to better understand the key drivers and consequences of ecosystem change in Pacific Northwest (PNW) estuaries{\textquotedblright} (from the Abstract). Topics explored include eelgrass and macroalgae, coho salmon and the Dungeness crab catch. },
	pages = {274 p.},
	school = {Oregon State University},
	type = {Doctoral Dissertation},
	edition = {Ph. D.},
	chapter = {Dept. of Integrative Biology},
	address = {Corvallis, Or.},
	keywords = {Alsea Bay, Beaver Creek, carbon dioxide, climate, Coho salmon = Oncorhynchus kisutch, Coos Bay, dissolved oxygen, Dungeness crab =   Metacarcinus magister (Cancer magister), eelgrass = Zostera marina, El Nino, Oregon Coast, Pacific Decadal Oscillation, pH, phosphate, precipitation, salinity, sea lettuce = Ulva spp., Siletz Bay, Siuslaw River estuary, Umpqua River, upwelling, water temperature, Yaquina Bay},
	url = {https://ir.library.oregonstate.edu/concern/graduate_thesis_or_dissertations/gt54kv37z },
	author = {Magel, Caitlin L.}
}
@article {83111,
	title = {Effect of sulfide and the role of root mass on metabolic fluxes in the seagrass <i>Zostera marina</i>},
	journal = {Environmental and Experimental Botany},
	volume = {180},
	number = {104267},
	year = {2020},
	note = {Eelgrass offer vital habitats for many species. Yet eelgrass populations around the world are declining. In this article, the authors examine the potential role of hydrogen sulfide in inhibiting eelgrass growth.  This study showed that the size of eelgrass root mass was an important variable in understanding the plants{\textquoteright} interactions with sulfides.  },
	month = {2020, Dec.},
	pages = {10 p.},
	keywords = {carbon dioxide, eelgrass = Zostera marina, growth, hydrogen sulfide, Idaho Point, nitrogen, oxygen, Yaquina Bay},
	doi = {https://doi.org/10.1016/j.envexpbot.2020.104267  },
	author = {Peyer, Suzanne M. and Maricle, Brian R. and Young, David R.}
}
@mastersthesis {54851,
	title = {Autonomous <i>in situ</i> Measurements of Estuarine Surface PCO<sub>2</sub>: Instrument Development and Initial Estuarine Observations},
	year = {2014},
	note = {Understanding the carbon cycle is increasingly important in a world feeling the effects of anthropogenic climate change.  While oceans absorb carbon dioxide, estuaries release CO2 into the atmosphere, so understanding estuarine processes is particularly important.  The carbon cycle in estuaries, however, is complex.  In this thesis, the author describes a new instrument that can be used to measure the partial pressure of carbon dioxide and details how it was used in the Yaquina Bay estuary, and in the Pacific Ocean. Measurements of CO2  in Alsea Bay and Netarts Bay are also discussed.  The thesis gives a good overview of carbon chemistry and dynamics in the estuarine environment. Major professor was Burke R. Hales.},
	pages = {89 p.},
	school = {Oregon State University},
	type = {Masters Thesis},
	edition = {M.S.},
	chapter = {College of Ocean, Earth and Atmospheric Sciences},
	address = {Corvallis, Or.},
	keywords = {Alkalinity, Alsea Bay, Canyon Quarry Park, carbon dioxide, estuarine dynamics, Netarts Bay, salinity, theses, Toledo, Toledo Boat Launch, Yaquina Bay},
	url = {https://ir.library.oregonstate.edu/concern/graduate_thesis_or_dissertations/zg64tr497},
	author = {Wall, Colleen McKay}
}
@article {54811,
	title = {NACP Greenhouse Gases Multi-Source Data Compilation, 2000-2009},
	year = {2014},
	note = {The North American Carbon Program (NACP) is a multidisciplinary research program designed to obtain scientific understanding of North America{\textquoteright}s carbon sources and sinks and of changes in carbon stocks needed to meet societal concerns and to provide tools for decision makers.  This data set is a collection of measurements of carbon dioxide (CO2) and non-CO2 greenhouse gases made across North America by nine independent atmospheric monitoring networks from 2000 - 2009. The Oregon data was collected by the Irvine Latitude Network at the University of California, Irvine.},
	publisher = {U.S. Oak Ridge National Laboratory. Distributed Active Archive Center,},
	address = {Oak Ridge, Tenn.},
	keywords = {Cape Blanco Lighthouse, Cape Foulweather, Cape Lookout State Park, carbon dioxide, climate change, Yachats State Park, Yaquina Head Lighthouse},
	url = {https://daac.ornl.gov/cgi-bin/dataset_lister.pl?p=28},
	author = {Wofsy, S.C. and Dayalu, A.}
}
@article {28166,
	title = {Biological and chemical features of tidal estuaries},
	journal = {Journal of the Water Pollution Control Federation},
	volume = {36},
	number = {8},
	year = {1964},
	month = {August_1964},
	pages = {p.1037-1048},
	keywords = {abundance, Acartia species, aquatic invertebrates, biological, Buoy 15, Buoy 21, Buoy 29, Buoy 39, Buoy 45, carbon dioxide, chemical, copepods, crustaceans, estuarine dynamics, general ecosystem description, hydrology, nutrient cycles, population biology, Pseudocalanus species, salinity, temporal distribution, tidal currents, water temperature, Yaquina Bay},
	author = {Frolander, Herbert F.}
}
