@article {83193, title = {Freshwater mussel populations in Pacific Coast watersheds (Oregon, USA): occurrence, condition, habitat, and fish species overlap}, journal = {Hydrobiologia}, volume = {850}, year = {2023}, note = {Freshwater mussels provide several valuable ecosystem services, including biofiltration, which removes nutrients, sediments, algae, harmful bacteria and heavy metals from the environment. Despite their value, freshwater mussel life cycles are not well understood, and their populations are declining throughout the west. This article concerns the dominant freshwater mussel in Oregon, the western pearl mussel, Margaritifera falcata. {\textquotedblleft}To understand M. falcata population ecology in Oregon{\textquoteright}s coastal watersheds, we analyzed stream survey data on presence/absence of mussels collected over a recent eleven-year period, explored co-varying habitat characteristics, and summarized mussel distribution and host fish co-occurrence. We also collected M. falcata and compared condition indices among eight locations{\textquotedblright} (from the Abstract). This is an open-access article. Additional data is included in a supplementary file.}, month = {2023}, pages = {p.821{\textendash}839}, keywords = {Alsea River, Beaver Creek, Coho salmon = Oncorhynchus kisutch, depleted populations, Devil{\textquoteright}s Lake, geographical distribution, life history information, Salmon River, Siletz River, Siuslaw River, Umpqua River, Western pearl mussel = Margaritifera falcata, Yachats River, Yaquina River}, doi = {https://doi.org/10.1007/s10750-022-05127-w}, url = {https://link.springer.com/article/10.1007/s10750-022-05127-w}, author = {Scully-Engelmeyer, Kaegan and Blevins, Emilie and Granek, Elise F. and Constable, Ronald J., Jr.} } @article {83251, title = {Northwest Forest Plan: The first 25 years (1994-2018): Watershed condition status and trends}, volume = { no.PNW-GTR-1010}, year = {2023}, note = {"This report describes status and trends in watershed condition across the Northwest Forest Plan (NWFP) area over the first 25 years since its inception in 1994. The program charged with this task is the Aquatic and Riparian Effectiveness Monitoring Program (AREMP), which has assembled information from field data collection, spatial datasets, and a host of landscape models to evaluate the status and trends in aquatic resources in streams and watersheds. Field data included hydrologic measurements (stream wetted widths and temperatures), geomorphic responses (instream wood and sediment), and biological responses (macroinvertebrates and aquatic organism passage){\textquotedblright} (from the Abstract). Forest manager{\textquoteright}s efforts have shown incremental progress in improving aquatic conditions in Federal forests, but in a context of climate change. More planning and adaptions in monitoring methods are warranted.}, month = {2023, Jun.}, pages = {165 p.}, institution = {Pacific Northwest Research Station}, address = {Portland, Or. }, keywords = {climate, environmental law and policy, erosion, general, hydrology, landslides, large woody debris, logging, Pacific Northwest, precipitation, riparian areas, sediment, terrestrial vegetation, water temperature}, url = {https://www.fs.usda.gov/pnw/pubs/pnw_gtr1010.pdf }, author = {Dunham, Jason and Hirsch, Christine and Gordon, Sean and Flitcroft, Rebecca and Chelgren, Nathan and Snyder, Marcia and Hockman-Wert, David and Reeves, Gordon and Andersen, Heidi and Anderson, Scott and Battaglin, William and Black, Tom and Brown, Jason and Claeson, Shannon and Hay, Lauren E. and Heaston, Emily and Luce, Charles and Nelson, Nathan and Penn, Colin and Raggon, Mark and Pacific Northwest Research Station.} } @article {83195, title = {Restoring Sea Otters to the Oregon Coast: A Feasibility Study}, year = {2023}, note = {When sea otters were exterminated in Oregon, there was no predator to stop the sea urchin population from expanding. Sea urchins eat kelp. More urchins mean less kelp. Less kelp means that many animals lose valuable habitat. Nearshore waters become rougher, because kelp beds cause the seas to lie down. The post-otter environment is less diverse and less hospitable. The Elakha Alliance (named for the Chinook Jargon word for sea otter) has been formed to realize the vision of bringing the sea otter back to Oregon. This book is about their dream. The authors have meticulously examined multiple aspects of the problem, from environmental to legal, and conclude that it is possible to bring otters back. Interestingly, estuaries may provide valuable launching grounds, offering more protection than the open sea. As keystone predators, sea otters would help restore an environment badly out of balance, and would provide many benefits aside from being adorable. As they say, the best dreams happen when we are awake. Colored maps, colored pictures.}, month = {2023}, pages = {249 p.}, institution = {Elakha Alliance}, edition = {2nd ed.}, address = {Siletz, Or.}, keywords = {Coos Bay, economics, ecosystem health, environmental law and policy, genetics, habitats, histology, historical, human impacts, marine mammals, population biology, Reintroductions, Sea otter = Enhydra lutris, sociology, Tillamook Bay, Translocations, Yaquina Bay}, url = {https://www.elakhaalliance.org/feasibility-study/ }, author = {Tinker, M. Tim and Estes, James and Bodkin, James and Larson, Shawn and Murray, Mike and Hodder, Jan and Elakha Alliance.} } @article {83189, title = {Nonfishing impacts on essential fish habitat}, volume = {no.2022-01}, year = {2022}, note = {Many human activities that are not directly related to fishing can harm essential fish habitat. This publication looks at 19 different human activities that can damage essential fish habitat, from climate change to forest management to noise pollution, and more. The authors describe for each activity what is known to affect essential fish habitat, potential impacts, {\textquotedblleft}and provide proactive conservation measures designed to minimize or avoid them{\textquotedblright} (from the Plain Language Summary).}, month = {2022, Dec.}, pages = {258 p.}, institution = {National Marine Fisheries Service}, address = {Seattle, Wash.}, keywords = {agriculture, Alsea River, aquaculture, climate, dams, dredging, energy, general, industrial development, Industrial waste, logging, mining, Noise, oil spills, Oregon Coast, ports, Sewage, shipping, Yaquina River}, doi = {https://doi.org/10.25923/zxz1-m712}, url = {https://repository.library.noaa.gov/view/noaa/48083/noaa_48083_DS1.pdf }, author = {Kiffney, Peter and Thompson, Jamie and Blaud, Brianna and Hoberecht, Laura} } @mastersthesis {83186, title = {Relationship between Ascarophis Sp. (Nematoda: Cystidicolidae), Sturgeon Feeding Pit Density and Ghost Shrimp Burrowing Behavior}, year = {2022}, note = {One of the most challenging problems in biology is to map the life cycle of a parasite. Many parasites often have more than one intermediate host, before the final host, and it can be very difficult to determine the life stages of the parasite. This work is concerned with the use of a parasitic nematode worm as a possible biological control on ghost shrimp. Ghost shrimp burrow in mudflats, and can disturb oyster grounds. They were formerly controlled by pesticides, but this technique is no longer practiced. There is an economic incentive to find a way to limit their population around oyster beds. Sturgeon are bottom-feeders, and burrow in mud, creating feeding pits to find benthic prey. The author of this Master{\textquoteright}s thesis sought to determine if sturgeon were the final hosts of the Ascarophis nematode, and if infection with the nematode changed burrowing patterns of ghost shrimp. Major professors were Jessica Miller and Brett Dumbauld.}, pages = {50 p.}, school = {Oregon State University}, type = {Masters Thesis}, edition = {M.S.}, chapter = {Dept. of Fisheries and Wildlife, Fisheries Science}, address = {Corvallis Or.}, keywords = {Biocontrol, bioturbation, Ghost shrimp = Neotrypaea californiensis (Callianassa californiensis), Green sturgeon = Acipenser medirostris, Idaho Flats, life history information, mudflats, Pacific oyster = Crassostrea gigas, parasites, Parasitic nematode = Ascarophis spp., Tongue Island (Yaquina), White sturgeon = Acipenser transmontanus, Willapa Bay, Yaquina Bay}, url = {https://ir.library.oregonstate.edu/concern/graduate_thesis_or_dissertations/p8418w13m }, author = {Brockman, Joseph N.} } @article {83146, title = {Status of the European Green Crab, Carcinus maenas, in Oregon and Washington Coastal Estuaries. Report for 2020 and 2021}, year = {2022}, note = {The COVID-19 pandemic affected this report, leading to combined years and trapping on a reduced number of estuaries. The invasive European green crab is a voracious predator of bivalve molluscs, small crustaceans and other organisms. It has been present in Oregon since the late 1990s. The population grows when winter waters are warm, as they are during El Ni{\~n}os. Since 2015, however, {\textquotedblleft}recruitment has been good every year. Since green crabs live for 6 years, these recent strong year classes can produce larvae until 2027. . . Now that populations in Oregon, Washington and British Columbia have built up, we have evidence for local production and for larvae sources from a genetically distinct population on Vancouver Island. . .{\textquotedblright} (from the Executive Summary) This report is accompanied by a dataset, available at: https://ir.library.oregonstate.edu/concern/datasets/b8515w17z }, pages = {27 p.}, institution = {Pacific States Marine Fisheries Commission. Aquatic Nuisance Species Project}, address = {Portland, Or.}, keywords = {aquatic invertebrates, Coos Bay, crustaceans, El Nino, European green crab = Carcinus maenas, Grays Harbor (Wa.), introduced species, Netarts Bay, Pacific Decadal Oscillation, population count, Tillamook Bay, Willapa Bay (Wa.), Yaquina Bay}, url = {https://ir.library.oregonstate.edu/concern/technical_reports/g445cn70c }, author = {Yamada, Sylvia Behrens and Royer, Cameron and Schooler, Shon and Fisher, Jennifer and Randall, Andrea and Buffington, Chelsey and Stote, Alex and Akmajian, Adrianne} } @article {83182, title = {A doubled down invasion of the northeast Pacific by the Asian mud shrimp, Upogebia major, and its coevolved bopyrid isopod parasite, Orthione griffenis}, journal = {Aquatic Invasions}, volume = {16}, number = {4}, year = {2021}, note = {The blue mud shrimp, Upogebia pugettensis, is known to be an ecosystem engineer, turning over and re-suspending, and aerating sediments (bioturbation), burrowing, and deposit feeding. The mud shrimp affects organic structure, nutrients, and the grain size of sediments in mudflats. Some of this activity creates difficulties for oyster growers, causing the application of pesticides in oyster growing areas in the 1950s. It may be that the changes in the ecosystem caused by introduced oysters and pesticides opened the doors for subsequent invasions. In 1999, a parasitic isopod was discovered to be infecting the native mud shrimp, and effectively sterilizing the shrimp. A related species, the Asian mud shrimp. Upogebia major, is less susceptible to the parasite, and has begun to fill in spaces formerly occupied by the blue mud shrimp. While this article is concerned with mud shrimp populations in California, the dynamics discussed are relevant to Oregon estuaries. If the ways our estuaries are engineered changes thanks to the double invasion, the way we manage our estuaries will also have to change. This is an open-access article, and it has also been re-printed as no.21-021 in the ORESU-R series.}, month = {2021}, pages = {p.721{\textendash}749}, keywords = {Alsea Bay, Asian mud shrimp Upogebia major, bioturbation, community ecology, Coos Bay, depleted populations, Griffen{\textquoteright}s isopod = Orthione griffensis, introduced species, Mud shrimp = Upogebia pugettensis, natural resource management, Nestucca Bay, Netarts Bay, Upogebia macginitieorum, Yaquina Bay}, doi = {https://doi.org/10.3391/ai.2021.16.4.09}, url = {https://ir.library.oregonstate.edu/concern/articles/k643b826b }, author = {Chapman, John W. and Li, Jingchun and McGowan, Michael F. and Breitenstein, Ralph A. and Appy, Ralph and Hieb, Kathryn A. and Piotrowski, Christina N. and Elder, Leanne E.} } @article {83100, title = {Management of anadromous lampreys: Common threats, different approaches}, journal = {Journal of Great Lakes Research. Supplement}, volume = {47 }, number = {Sup.1 }, year = {2021}, note = {This review article summarizes what is known about the statuses of many lamprey species around the world. The usual suspects, primarily human activity and climate change get the blame for most population declines. Management of the Pacific lamprey is a bright spot, largely due to the efforts and advocacy of Native Americans. The Western river lamprey, on the other hand, suffers from inadequate research, which is needed in order to support conservation.}, month = {2021, Dec.}, pages = {S129-S146}, keywords = {Alsea River, Beaver Creek, climate, Cummins Creek, dams, depleted populations, human impacts, land use, Pacific lamprey = Entosphenus tridentatus (Lampetra tridentata), River lamprey = Lampetra ayresi, Salmon River,, Siletz River, Siuslaw River, Tenmile Creek, Umpqua River, water use, Yachats River, Yaquina River}, doi = {https://doi.org/10.1016/j.jglr.2020.09.005 }, author = {Clemens, Benjamin J. and Arakawa, Hiroaki and Baker, Cindy and Coghian, Stephen and Kucheryavyy, Aleksandr and Lampman, Ralph and Lan{\c c}a, Maria Jo{\~a}o and Mateus, Catarina Sofia and Miller, Allison and Nazari, Hassan and Peque{\~n}o, Germ{\'a}n and Sutton, Trent M. and Yanai, Seiji} } @article {83114, title = {A maximum rupture model for the central and southern Cascadia subduction zone{\textemdash}reassessing ages for coastal evidence of megathrust earthquakes and tsunamis}, journal = {Quaternary Science Reviews}, volume = {261 }, number = {106922}, year = {2021}, note = {{\textquotedblleft}A new history of great earthquakes (and their tsunamis) for the central and southern Cascadia subduction zone shows more frequent (17 in the past 6700 yr) megathrust ruptures than previous coastal chronologies.{\textquotedblright} (from the Abstract) The article contains a link to supplementary data, also accessible through U.S. Geological Survey data releases.}, month = {2021, Jun.1}, pages = {19 p.}, keywords = {Alsea Bay, coastal hazards, Columbia River, Coos Bay, Coquille River, earthquakes, geology, mathematical modeling, Nehalem River, Nestucca Bay, Netarts Bay, paleosciences, Siletz Bay, Siuslaw River, tsunamis, Yaquina Bay}, doi = {https://doi.org/10.1016/j.quascirev.2021.106922 }, author = {Nelson, Alan R. and DuRoss. Christopher B. and Witter, Robert C. and Kelsey, Harvey M. and Engelhart, Simon E. and Mahan, Shannon A. and Gray, Harrison J. and Hawkes, Andrea D. and Horton, Benjamin P. and Padgett, Jason S.} } @article {83163, title = {Port of Toledo Strategic Business Plan Update: 11/23/2001 Final Strategic Business Plan Update}, year = {2021}, note = {Good statistics}, pages = {55 p.}, keywords = {Depot Slough, dredging, economics, industrial development, navigation, physical modification, Port of Toledo, ports, Tokyo Slough, Toledo (Or.), Toledo Industrial Park, Yaquina River}, url = {https://www.portoftoledo.org/_files/ugd/bcfe89_3a93c1a11ede48cbaad53a7e0cf8cd7e.pdf}, author = {BST Associates,, and Port of Toledo (Or.),} } @article {83046, title = {Shifting signals: Correlations among freshwater, marine and climatic indices often investigated in Pacific salmon studies}, journal = {Ecological Indicators}, volume = {121}, number = {Article 10716}, year = {2021}, note = {This article is about the correlations and cross-connections between different environmental indices, and how they can be better used to understand environmental conditions in a changing climate. The authors used 43 freshwater, marine and climate indices to examine 72 river sites in Washington, Oregon, California and Idaho. {\textquotedblleft}As the climate continues to change, it becomes more evident that maintaining a mindset encompassing static processes limits our abilities to explain patterns among environmental indices. This recognition in the context of multiple climatic teleconnections will help foster the development and utility of more resilient methodological approaches that account for changing correlations{\textquotedblright} (p.17). This is an open-access article.}, month = {2021, Feb.}, pages = {18 p.}, keywords = {Alsea River, California Current, Chinook salmon = Oncorhynchus tshawytscha, climate, Coho salmon = Oncorhynchus kisutch, Coquille River, environmental monitoring, Lower Umpqua River, mathematical modeling, North Fork Nehelem River, Siletz River, South Umpqua River}, doi = {https://doi.org/10.1016/j.ecolind.2020.107167 }, url = {https://www.sciencedirect.com/science/article/pii/S1470160X20311067?via\%3Dihub}, author = {Gosselin, Jennifer L. and Crozier, Lisa G. and Burke, Brian J} } @article {83206, title = {Analysis of earthquake and tsunami impacts for people and structures inside the tsunami zone for five Oregon coastal communities: Gearhart, Rockaway Beach, Lincoln City, Newport, and Port Orford}, volume = {no.O-20-03}, year = {2020}, note = {{\textquotedblleft}This report evaluates the effects of a great (M w 9.0) earthquake and tsunami on the Cascadia Subduction Zone for five Oregon coast communities, in order to understand the degree of potential destruction, including: potential building losses, debris generated, fatalities and injuries, and estimated numbers of the displaced populations. The goal is to help coastal communities prepare{\textquotedblright} (p.ii). Very interesting community profiles, colored maps. The report is accompanied by an Excel file, a casualty model spreadsheet.}, pages = {185 p.}, institution = {Oregon. Department of Geology and Mineral Industries}, address = {Portland, Or.}, keywords = {Agate Beach, coastal hazards, Cutler City, demographics, earthquakes, erosion, floods, Gearhart (Or.), landslides, Lincoln City (Or.), Necanicum River estuary, Newport (Or.), Newport bayfront, Nye Beach, Port Orford (Or.), Rockaway Beach (Or.), Siletz Bay, South Beach, tsunamis, Yaquina Bay}, url = {https://www.oregongeology.org/pubs/ofr/O-20-03/O-20-03_report.pdf }, author = {Bauer, John M. and Allan, Jonathan C. and Gabel, Laura L. S. and O{\textquoteright}Brien, Fletcher E. and Roberts, Jed T.} } @article {82984, title = {Status of the European Green Crab, Carcinus maenas, in Oregon and Washington Coastal Estuaries in 2019}, year = {2020}, note = {The invasive European green crab is a voracious predator of bivalve molluscs, small crustaceans and other organisms. It has been present in Oregon since the late 1990s. The population grows when winter waters are warm, as they are during El Ni{\~n}os. {\textquotedblleft}After the arrival of a strong year class in 1998, significant recruitment to the populations occurred only in2003,2005,2006,2010, 2015, 2016, 2017, 2018 and 2019. Warm winter water temperatures, high Pacific Decadal Oscillation (PDO) and Multivariate ENSO (El Ni{\~n}o Southern Oscillation) Indices, and a high abundance of southern copepods are all correlated with strong year classes and vice versa. . . Prior to 2015, green crabs were too rare (<0.2 per trap) to exert measurable effects on the native benthic community and on shellfish culture in Oregon and Washington. But after the 2015-2016 El Ni{\~n}o, we document the arrival of five strong year classes. Average catches steadily increased from 0.5 crabs per trap, in 2015 to around 3 crabs per trap in 2017 to 2019. The catches in the last 3years are much higher than in any of the previous years, including 1998. Catches in some hotspots exceed 10 crabs per trap, a level at which measurable ecological impact can be expected. . . Since green crabs live for 6 years, these five consecutive year classes can produce larvae until 2025.{\textquotedblright} (from the Executive Summary) Coos Bay, in particular, has experienced shocking growth of this population, going from 9 crabs captured in 2002 to 1,397 crabs captured in 2019. This report is accompanied by a dataset, available at: https://ir.library.oregonstate.edu/concern/datasets/028712995 }, pages = {31 p.}, institution = {Pacific States Marine Fisheries Commission. Aquatic Nuisance Species Project}, address = {Portland, Or.}, keywords = {Alsea Bay, aquatic invertebrates, Coos Bay, Coquille River estuary, crustaceans, El Ni{\~n}o, European green crab = Carcinus maenas, introduced species, Nehalem Bay, Netarts Bay, Pacific Decadal Oscillation, population count, Tillamook Bay, Yaquina Bay}, url = {https://ir.library.oregonstate.edu/concern/technical_reports/xk81js14x }, author = {Yamada, Sylvia Behrens, and Schooler, Shon and Heller, Renee and Donaldson, Luke and Takacs, Graham T. and Randall, Andrea and Buffington, Chelsey and Akmajian, Adrianne} } @article {83035, title = {Zooplankton invasion on a grand scale: insights from a 20-yr time series across 38 Northeast Pacific estuaries}, journal = {Ecosphere}, volume = {11}, number = {5}, year = {2020}, note = {This paper summarizes the results of over 20 years of observations of zooplankton invasions of Pacific Northwest estuaries, from 2006-2016. {\textquotedblleft}Our results show that some estuaries across the region are invaded by multiple zooplankton species and that the geographic extent of invasion is far greater than previously reported for at least five species of copepods . . . We propose that the geographic distribution of these invaders is strongly constrained by geomorphic characteristics that define the salinity and mixing regimes in these estuaries, reflecting the strong role that physical forces play in structuring estuarine zooplankton communities.{\textquotedblright} (from the Abstract) This is an open-access publication.}, month = {2020, May}, pages = {e03040}, keywords = {aquatic invertebrates, Chetco River, Coos River, copepods, Coquille River, estuarine dynamics, habitats, introduced species, Rogue River, salinity, Siuslaw River, Tillamook River, Umpqua River, water temperature, Yaquina River, zooplankton}, doi = {https://doi.org/10.1002/ecs2.3040 }, url = {https://esajournals.onlinelibrary.wiley.com/doi/epdf/10.1002/ecs2.3040 }, author = {Dexter, Eric and Bollens, Stephen M. and Cordell, Jeffery and Rollwagen-Bollens, Gretchen} } @article {83109, title = {Application of the extractable lipofuscin aging method to estimate mortality and population dynamics of the burrowing shrimp, Neotrypaea californiensis}, journal = {Estuarine, Coastal and Shelf Science}, volume = {219}, year = {2019}, note = {Burrowing shrimp play important roles in estuaries by moving sediment (bioturbation). They also create problems for oyster farmers by burying oyster seed, and have been widely regarded as pests. In the past, the pesticide carbaryl was used on mudflats to exterminate burrowing shrimp. While less toxic methods are currently used, it is important for the oyster industry to understand the population and age of burrowing shrimp in the ecosystem. This article reports on a new method of aging the shrimp population and estimating its mortality using the cellular waste product lipofuscin and reports on implications of varying levels of burrowing shrimp populations.}, month = {2019, Apr.5}, pages = {p.33-44}, keywords = {age composition, Ghost shrimp = Neotrypaea californiensis (Callianassa californiensis), Idaho Flats, mathematical modeling, mortality, population biology, Yaquina Bay}, doi = {https://doi.org/10.1016/j.ecss.2019.01.015 }, author = {Bosley, Katelyn M. and Wainwright, Thomas and Dumbauld, Brett R.} } @article {83136, title = {Classification of Native Vegetation of Oregon - 2019}, year = {2019}, note = {{\textquotedblleft}This classification is an update of the 2004 classification of native vegetation of Oregon by Kagan, Christy, Murray and Titus. As before, this classification lists the native plant associations known to occur in Oregon, and includes both successional and climax vegetation types that were part of the presettlement landscape of Oregon and can still be found in the state. It serves as an index to the diversity, distribution and relative rarity of the state{\textquoteright}s native plant associations, and as a guide to their literature.{\textquotedblright} (from the introduction)}, pages = {109 p.}, institution = {Oregon Biodiversity Information Center}, address = {Portland, Or.}, keywords = {bibliography, depleted populations, species list, terrestrial vegetation, wetland vegetation}, url = {https://ir.library.oregonstate.edu/concern/technical_reports/2r36v492k }, author = {Kagan, James S. and Brunner, Rachel L. and Christy, John A.} } @article {82621, title = {Climate vulnerability assessment for Pacific salmon and steelhead in the California Current Large Marine Ecosystem}, journal = {PLoS One}, volume = {14}, number = {7}, year = {2019}, note = {This article is a major scientific overview of the vulnerability of Pacific Coast anadromous salmonids to climate change. {\textquotedblleft}Nearly all listing units faced high exposures to projected increases in stream temperature, sea surface temperature, and ocean acidification. . . Anthropogenic factors, especially migration barriers, habitat degradation, and hatchery influence, have reduced the adaptive capacity of most steelhead and salmon populations. Enhancing adaptive capacity is essential to mitigate for the increasing threat of climate change. Collectively, these results provide a framework to support recovery planning that considers climate impacts on the majority of West Coast anadromous salmonids{\textquotedblright} (from the Abstract). Projections were made about Oregon coast coho salmon.}, pages = {e0217711}, edition = {2019, Jul. 24}, keywords = {Oregon Coast, Pacific salmonids = Oncorhynchus spp., Coho salmon = Oncorhynchus kisutch, climate change, depleted populations, ecosystem health, endangered species, habitats, hatcheries, human impacts, life history, ocean acidification, water temperatur}, doi = {https://doi.org/10.1371/journal.pone.0217711 }, url = {https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0217711 }, author = {Crozier, Lisa G. and McClure, Michelle M. and Beechie, Tim and Bograd, Steven J. and Boughton, David A. and Carr, Mark and Cooney, Thomas D. and Dunham, Jason B. and Greene, Correigh M. and Haltuch, Melissa A. and Hazen, Elliott L. and Holzer, Damon M. and Huff, David O. and Johnson, Rachel C. and Jordan, Chris E. and Kaplan, Isaac C. and Lindley, Steven T. and Mantua, Nathan J. and Moyle, Peter B. and Myers, James M. and Nelson, Mark W. and Spence, Brian C. and Weitkamp, Laurie A. and Williams, Thomas H. and Willis-Norton, Ellen} } @article {82891, title = {Environmental and morphologic controls on wave-induced dune response}, journal = {Geomorphology}, volume = {329}, year = {2019}, note = {{\textquotedblleft}Coastal erosion poses a major threat to coastal communities by limiting beach access, endangering backshore infrastructure, and impacting ecologically important environments. The preservation of coastal foredunes, features which provide the first line of defense for liiting backshore flooding is of particular interest as a valuable form of green infrastructure{\textellipsis}{\textquotedblright} (p.108) In this paper, the authors examine factors affecting dune growth and erosion. They compare three different sites on the Northwest Coast: Oysterville, the Netarts Littoral Cell and South Beach. Field observations were supplemented with a modeling program, and the combination of the two has led to new insights.}, month = {2019, Mar 15}, pages = {p.108-128}, keywords = {Cape Lookout, climate, coastal dunes, coastal hazards, erosion, mathematical modeling, Netarts Littoral Cell, Oysterville (Wa.), sea level, South Beach, wave height, Yaquina Bay}, doi = {https://doi.org/10.1016/j.geomorph.2018.12.023 }, author = {Cohn, Nicholas and Ruggiero, Peter and Garc{\'\i}a-Medina, Gabriel and Anderson, Dylan and Serafina, Katherine A. and Reuben Biel, Reuben} } @mastersthesis {83172, title = {Evaluation of a Habitat Suitability Model to predict the geospatial distribution of Olympia oyster presence in Yaquina Bay, Oregon}, year = {2019}, note = {This intriguing Capstone Project report takes the place of a Masters thesis. In this work, the author explores Habitat Suitability Modeling, a way to predict how wild Yaquina oysters are distributed through understanding their environmental requirements. {\textquotedblleft}This project evaluates the use of an HSM, developed using geospatial raster layers of salinity, substrate, and elevation, in Yaquina Bay, Oregon to predict locations of Olympia oyster presence. This study was unable to make a conclusive determination regarding the predictive capacity of the HSM due to a small number of field samples. Recommendations are provided for expanding the HSM and supporting several other management applications, including characterizing the abiotic and biotic attributes of the habitat occupied by Olympia oysters and identifying biological monitoring sites{\textquotedblright} (from the Abstract). Colored maps. The major professor was Steven S. Rumrill.}, pages = {90 p.}, school = {Oregon State University}, type = {Capstone Project}, edition = {M.S.}, chapter = {College of Earth, Ocean, and Atmospheric Sciences. Marine Resource Management Program}, address = {Corvallis, Or.}, keywords = {aquatic invertebrates, bivalves, Craigie Point, depleted populations, geographical distribution, habitats, mathematical modeling, McClean Point, mollusks, Olympia oyster=Ostrea lurida (Ostrea conchaphila), oysters, The Bend, Yaquina Bay}, url = {https://ir.library.oregonstate.edu/concern/graduate_projects/0v838678g }, author = {Bohlen, Victoria L.} } @article {83230, title = {Headwater streams and wetlands are critical for sustaining fish, fisheries, and ecosystem services}, journal = {Fisheries}, volume = {44}, number = {2}, year = {2019}, note = {In 2019, the Trump Administration proposed amending the Waters of the United States (WOTUS) Act to narrow the definition of wetlands, and to remove millions of acres from protection. In resonse, the American Fisheries Society published this article, an {\textquotedblleft}AFS Special Report{\textquotedblright} on the value of headwaters and wetlands, particularly of streams that are dry part of the year. The Biden Administration subsequently reversed the Trump amendment, but the U.S. Supreme Court, in Sackett vs. the Environmental Protection Agency, ruled in favor of narrowing the definition in 2023. Many aspects of this slow-moving environmental disaster are still in litigation. The article includes a photograph of Crowley Creek on Cascade Head.}, month = {2019, Feb.}, pages = {p.73-91}, keywords = {Calapooia River, Cascade Head National Scenic And Research Area, Coho salmon = Oncorhynchus kisutch, Crowley Creek, depleted populations, ecosystem health, environmental law and policy, general, Oregon chub = Oregonichthys crameri, wetlands, Willamette River}, doi = {https://doi.org/10.1002/fsh.10229 }, url = {https://ir.library.oregonstate.edu/concern/articles/n583z1008 }, author = {Colvin, Susan A. R. and Sullivan, S. and Mazeika P. and Shirey, Patrick D. and Colvin, Randall W. and Winemiller, Kirk O. and Hughes, Robert M. and Fausch, Kurt D. and Infante, Dana M. and Olden, Julian D. and Bestgen, Kevin R. and Danehy, Robert J. and Eby, Lisa} } @article {82531, title = {Insights into estuary habitat loss in the western United States using a new method for mapping maximum extent of tidal wetlands}, journal = {PLoS One}, volume = {14}, number = {8}, year = {2019}, note = {This article recounts the techniques that led to the production of the 2017 maps to model the effects of sea level rise. The authors used lidar digital elevation models and other elevation models to develop new maps of current and historical wetlands on the United States West Coast. Their work shows that about 85\% of historical wetlands have been lost, with most losses near major river deltas. {\textquotedblleft}The new maps will help interested groups improve action plans for estuarine wetland habitat restoration and conservation, and will also provide a better baseline for understanding and predicting future changes with projected sea level rise{\textquotedblright} (from the Abstract).}, month = {2019, Aug. 14}, keywords = {climate, habitats, human impacts, salinity, sea level, wetland vegetation, wetlands, remote sensing, mathematical modeling}, doi = {https://doi.org/10.1371/journal.pone.0218558 }, url = {https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0218558 }, author = {Brophy, Laura S. and Greene, Correigh M. and Hare, Van C. and Holycross, Brett and Lanier, Andy and Heady, Walter N. and O{\textquoteright}Connor, Kevin and Imaki, Hiroo and Haddad, Tanya and Dana, Randy} } @article {83025, title = {Patterns of riparian policy standards in riverscapes of the Oregon Coast Range}, journal = {Ecology and Society }, volume = {24}, number = {1}, year = {2019}, note = {This article examines fisheries management in the Oregon Coast Range from the point of view of the entire riverscape, in order to identify critical fish-bearing streams and regulatory gaps that have impacts on the fisheries. Portions of streams that fall under fisheries management plans, as well as those that are unregulated, are identified. There are gaps in protection for riparian areas in private forest lands, and particularly in agricultural lands. An appendix identifies streams studied and percentages of stream length that fall under major fisheries management plans. This is an open-access publication.}, pages = {article 22, 19 p.}, keywords = {agriculture, Coho salmon = Oncorhynchus kisutch, depleted populations, environmental law and policy, general, geographic information system, habitats, human impacts, logging, natural resource management, Oregon Coast, riparian areas}, doi = {https://doi.org/10.5751/ES-10676-240122 }, url = {https://www.ecologyandsociety.org/vol24/iss1/art22/ }, author = {Boisjolie, Brett A. and Flitcroft, Rebecca L. and Santelmann, Mary V.} } @article {83168, title = {Climate change and Oregon law: What is to be done?}, journal = {Journal of Environmental Law \& Litigation}, volume = {33}, number = {[12] }, year = {2018}, note = {The legal system often seems to change more slowly than the social and environmental milieu in which it functions. It is encouraging to find good minds looking at the problems caused by climate change and their repercussions on the legal system. In this article, the authors offer some practical advice Oregonians can use to adjust their laws to climate change. {\textquotedblleft}We examine two aspects of that response. The first concerns planning and regulation of land, and the second concerns the effects of climate change on property law. We suggest that traditional property law doctrines, such as reliction, avulsion, property boundaries, and public easements should be reexamined in the light of this crisis{\textquotedblright} (p.239). If we are to adapt to climate change, our institutions must adapt, and forward-looking publications like this will help.}, month = {2018}, pages = {p.235-323}, keywords = {climate, environmental law and policy, land use, water use}, url = {https://scholarsbank.uoregon.edu/xmlui/handle/1794/23295}, author = {Brickley, Alan K. and Schell, Steven R. and Sullivan, Edward J.} } @article {82016, title = {Ecological and biological studies of ocean rafting: Japanese tsunami marine debris in North America and the Hawaiian Islands}, journal = {Aquatic Invasions}, volume = {13}, year = {2018}, note = {{\textquotedblleft}This is one of the papers from the special issue of Aquatic Invasions on {\textquoteleft}Transoceanic Dispersal of Marine Life from Japan to North America and the Hawaiian Islands as a Result of the Japanese Earthquake and Tsunami of 2011.{\textquoteright}{\textquotedblright} (Co-Editors{\textquoteright} Note). This article is an introduction to the special issue of Aquatic Invasions. It summarizes the largest examples of tsunami debris found on the American Pacific coast and recounts the discovery of many new Japanese species identified as a result of research. Includes color photographs. This is an open-access article.}, month = {2018, Feb.}, pages = {p.1-9}, keywords = {Agate Beach, algae, aquatic invertebrates, coastal hazards, Coos Bay, earthquakes, genetics, geographical distribution, Gleneden Beach, introduced species, morphology, Pacific Coast, Seal Rock, species list, taxonomy, tsunamis}, doi = {https://doi.org/10.3391/ai.2018.13.1.01}, url = {https://tinyurl.com/2pxmp6e8}, author = {Carlton, James T. and Chapman, John W. and Geller, Jonathan B. and Miller, Jessica A. and Ruiz, Gregory M. and Carlton, Deborah A. and McCuller, Megan I. and Treneman, Nancy C. and Steves, Brian P. and Breitenstein, Ralph A. and Lewis, Russell and Bilderback, David and Bilderback, Diane and Haga, Takuma and Harris, Leslie H.} } @article {83229, title = {Ecological Effects of Tide Gate Upgrade or Removal: A Literature Review and Knowledge Synthesis}, year = {2018}, note = {{\textquotedblleft}This document reports on findings, conclusions and recommendations derived from scientific literature and knowledge regarding the effectiveness of tide gate removal or upgrade in improving conditions for Oregon{\textquoteright}s native migratory fish species, particularly salmonids, and other plant and animal species that utilize estuarine ecosystems. The project was commissioned by the Oregon Watershed Enhancement Board (OWEB) to foster better understanding of the effectiveness of their past investments in estuary habitat restoration involving tide gates, and to aid in targeting future investments. This will be especially important because many less-complicated projects (e.g. those on public land, smaller, single-action projects, those with consensus on land use) have already been completed, and restoration efforts are becoming increasingly complex and resource intensive{\textquotedblright} (from the Executive Summary).}, pages = {136 p.}, institution = {Institute for Natural Resources, Oregon State University }, address = {Corvallis, Or.}, keywords = {Bandon Marsh, Coho salmon = Oncorhynchus kisutch, Columbia River estuary, Coos Bay, depleted populations, dike removal, environmental law and policy, fish passage, flooding, human impacts, Little Nestucca River, Nehalem River, Pacific salmonids = Oncorhynchus spp., salinity, Salmon River Estuary, Siletz Bay, Siuslaw River, Tidal channels, Tide gates, Tillamook Bay, water temperature, wetland restoration, Yaquina Bay}, url = {https://www.oregon.gov/oweb/Documents/Tide-Gate-Ecological-Effects.pdf }, author = {Souder, Jon A. and Tomaro, Londi M. and Giannico, Guillermo R. and Behan, Jeff R.} } @article {80516, title = {Evaluating tidal wetland restoration performance using National Estuarine Research Reserve System reference sites and the Restoration Performance Index (RPI)}, journal = {Estuaries and Coasts}, volume = {41}, year = {2018}, note = {Oregon{\textquoteright}s estuaries have lost a lot of wetlands. Depending on the estuary, anywhere from 2\% to 94\% of native wetlands have been lost. Today, wetlands are being restored. But how do we know how successful wetland restoration projects may be? This article describes an analytical tool, the Restoration Performance Index, which compares different parameters between restored wetlands and unmodified reference sites. The authors compared 17 tidal wetland restoration projects in order to determine the level of restoration achieved, to compare excavation and hydrologic restoration projects, to identify key indicators for restoration effectiveness, and to evaluate the National Estuarine Research Reserve System as a source for reference sites. Full text of this article is available from the authors via ResearchGate.}, pages = {p.36-51}, keywords = {Chesapeake Bay, Coos Bay, environmental monitoring, hydrology, marsh restoration, Narragansett Bay, North Carolina, restoration ecology, South Slough, Toledo (Or.), Wells (Maine), wetland vegetation, Yaquina River Estuary}, doi = {10.1007/s12237-017-0220-7}, author = {Raposa, Kenneth B. and Lerberg, Scott and Cornu, Craig and Fear, John and Garfield, Nina and Peter, Christopher and Weber, Robin L. J. and Moore, Gregg and Burdick, David and Dionne, Michelle} } @article {83011, title = {Expansion and systematics redefinition of the most threatened freshwater mussel family, the Margaritiferidae}, journal = {Molecular Phylogenetics and Evolution}, volume = {127}, year = {2018}, note = {In this article, the evolution, distribution and taxonomy of the freshwater pearl mussel family, Margaritiferidae, is explored. Fossils as well as genetic data were used to model the diversification of this family. Maps, charts.}, month = {2018, Oct.}, pages = {p.98-118}, keywords = {aquatic invertebrates, bivalves, evolution, general, genetics, geographic distribution, molluscs, morphology, mussels, phylogeny, taxonomy}, doi = {https://doi.org/10.1016/j.ympev.2018.04.041 }, author = {Lopes-Lima, Manuel and Bolotov, Ivan N. and Do, Van Tu and Aldridge, David C. and Fonseca, Miguel M. and Gan, Han Ming and Gofarov, Mikhail Y. and Kondakov, Alexander V. and Pri{\'e}, Vincent and Sousa, Ronaldo and Varandas, Simone and Vikhrev, Ilya V. and Teixeira, Amilcar and Wu, Rui-Wen and Wu, Xiaoping and Zieritz, Alexandra and Froufe, Elsa and Bogan, Arthur E.} } @article {82001, title = {A genetic reconstruction of the invasion of the calanoid copepod Pseudodiaptomus inopinus across the North American Pacific Coast}, journal = {Biological Invasions}, volume = {20}, year = {2018}, note = {A planktonic copepod, Pseudiaptomus inopinus, native to the shores of China, Korea and Japan, has invaded the estuaries of the Pacific Northwest. This article addresses the question of how the species spread in the northwestern Pacific. Did it spread by migration from one estuary to its neighbors? Did it spread from a migrant pool offshore? Or did it spread by irregular random pulses? The authors used genetics to answer this question and concluded that a pulsed model of spread by ballast water at irregular intervals fits the data. {\textquotedblleft}The stochastic pattern of long-range dispersal observed in P. inopus suggests that planktonic invaders may spread across estuarine systems in a highly unpredictable manner.{\textquotedblright} (p.1592) }, pages = {p.1577-1595 }, keywords = {Tillamook Bay, Yaquina Bay, Umpqua River estuary, Coos Bay, Coquille Bay, introduced species, aquatic invertebrates, crustaceans, copepods, Pseudiaptomus inopinus, geographic distribution, ballast water, genetics, molecular biology}, doi = {https://doi.org/10.1007/s10530-017-1649-0 }, author = {Dexter, Eric and Bollens, Stephen M. and Cordell, Jeffery and Soh, Ho Young and Rollwagen-Bollens, Gretchen and Pfeifer, Susanne P. and Goudet, J{\'e}r{\^o}me and Vuilleumier, S{\'e}verine} } @article {83151, title = {Recruitment ecology of burrowing shrimps in US Pacific Coast estuaries}, journal = {Estuaries and Coasts }, volume = {41}, year = {2018}, note = {{\textquotedblleft}A series of surveys were undertaken to characterize recruitment and post-settlement processes for two species of burrowing shrimps, Neotrypaea californiensis and Upogebia pugettensis in order to determine how they influenced broader adult populations in US west coast estuaries. . . Patterns in strong recruitment years amongst estuaries, particularly for U. pugettensis, suggest the presence of multi-estuary metapopulations linked via larval dispersal. These results have important implications for shrimp population management including control for shellfish aquaculture, but also conservation of estuarine habitats due to the strong influence of these ecosystem engineers on the benthic community.{\textquotedblright} (from the Abstract)}, pages = {p.1848-1867}, keywords = {ecosystem engineer, Ghost shrimp = Neotrypaea californiensis (Callianassa californiensis), larvae, Mud shrimp = Upogebia pugettensis, population biology, settlement, Willapa Bay, Yaquina Bay}, doi = {https://doi.org/10.1007/s12237-018-0397-4}, author = {Dumbauld, Brett R. and Bosley, Katelyn M.} } @article {80556, title = {Human Dimensions of Climate Change in Coastal Oregon}, volume = {no. 2017-052 }, year = {2017}, note = {An attractive climate relative to the rest of the state and nation draws more people to the Oregon Coast. Longer, drier summers bring more tourists, more forest fires and less available freshwater. Heavier winter rains bring more flooding and erosion events. Higher water temperatures cause the ranges of animals (terrestrial and aquatic) to change, increase toxic algae blooms, kill salmon and stress Dungeness crabs. Increasing ocean acidity stresses shellfish. More intense winter storms and higher sea levels threaten infrastructure. These are some of the consequences of climate change outlined in this excellent report. One of the more valuable aspects of this comprehensive look at climate change in our area is extensive quotations from local residents. Good information on the Coos Bay and Newport areas. This report is highly recommended. }, pages = {216 p.}, institution = {U. S. Dept. of the Interior. Bureau of Ocean Energy Management, }, address = {Washington, D. C.}, keywords = {climate, coastal hazards, commercial fisheries, Coos Bay, demographics, ecosystem modeling, general, general ecosystem health, human impacts, ocean acidification, precipitation, sea levels, water temperature, Yaquina Bay}, url = {https://espis.boem.gov/final\%20reports/5630.pdf}, author = {Hoelting, Kristin and Burkardt, Nina} } @article {80396, title = {Learning from Oregon{\textquoteright}s 2015 Drought: A Review of Documented Conditions, Impacts, and Response Strategies}, year = {2017}, note = {Climate change brings rising sea levels, increased erosion, stronger storms and ocean acidification. It also brings stronger and longer-lasting droughts. This report reviews the record-setting 2015 drought in Oregon. Subjects covered include a review of literature on drought monitoring and reporting, a description of the 2015 drought, a summary of the drought{\textquoteright}s effects, and conclusions and recommendations. {\textquotedblleft}Coastal hatcheries were predominantly impacted, with Rock Creek Hatchery being the most severely affected. . . Shallow and warm waters from the North Umpqua River fed Rock Creek, which led to disease and the loss of nearly all of the hatchery{\textquoteright}s summer steelhead{\textquotedblright} (p.36).}, pages = {61 p.}, institution = {Oregon State University. Water Resources Policy \& Management Program,}, address = {Corvallis, Or.}, keywords = {General, agriculture, climate, environmental monitoring, hatcheries, industrial development, meteorology, Native Americans, precipitation, recreation, water quality, water temperature,}, url = {https://aquadoc.typepad.com/files/learning_from_oregons_2015_drought_23june2017.pdf}, author = {BeCraft, Rianne} } @article {82056, title = {Modeling Sea Level Rise Impacts to Oregon{\textquoteright}s Tidal Wetlands: Yaquina Bay Estuary [cartographic material]}, year = {2017}, note = {This map is associated with the report, {\textquotedblleft}Modeling Sea Level Rise Impacts to Oregon{\textquoteright}s Tidal Wetlands: Maps and Prioritization Tools to Help Plan for Habitat Conservation into the Future.{\textquotedblright} It depicts a possible sea-level rise scenario based on the West Coast Sea Level Rise Study (National Research Council, 2012). This map shows a possible rise in sea level of 4.7 feet by the year 2100. It shows what could happen to tidal wetlands: where they could expand, where they could be inundated. {\textquotedblleft}Prepared for: MidCoast Watersheds Council, Newport, Oregon.{\textquotedblright} {\textquotedblleft}With assistance from: Fran Recht, Pacific States Marine Fisheries Commission.{\textquotedblright} }, month = {2017, Aug. 27}, pages = {1 p.}, publisher = {>Institute for Applied Ecology}, address = {Corvallis, Or.}, keywords = {climate, habitats, human impacts, land use, salinity, sea level, wetland vegetation, wetlands, Yaquina River Estuary}, url = {https://ir.library.oregonstate.edu/concern/technical_reports/2801pn49k }, author = {Brophy, Laura S. and Ewald, Michael J.} } @article {82041, title = {Modeling Sea Level Rise Impacts to Oregon{\textquoteright}s Tidal Wetlands: Maps and Prioritization Tools to Help Plan for Habitat Conservation into the Future}, year = {2017}, note = {This study tracks possible conditions for Oregon coastal wetlands under six possible sea level rise scenarios between 2017 and 2160. {\textquotedblleft}If tidal wetland plant communities are unable to survive the increased inundation associated with sea level rise, they will have to move to higher ground through dispersal of seeds, roots, or rhizomes. This process is called "landward migration," and the areas that could become future tidal wetlands are called {\textquotedblleft}landward migration zones{\textquotedblright} (LMZs) in this study.{\textquotedblright} (p.5) Potential landward migration zones are mapped. Maps, charts, color photographs. This document is accompanied by maps, a PowerPoint presentation, a file of geospatial data, and a poster. {\textquotedblleft}Prepared for: MidCoast Watersheds Council, Newport, Oregon.{\textquotedblright} {\textquotedblleft}With assistance from: Fran Recht, Pacific States Marine Fisheries Commission.{\textquotedblright} }, pages = {64 p.}, institution = {Institute for Applied Ecology. Estuary Technical Group}, address = {Corvallis, Or.}, keywords = {Alsea Bay, Beaver Creek, climate, habitats, human impacts, Netarts Bay, salinity, Salmon River Estuary, sea level, Siletz Bay, Siuslaw River estuary, Umpqua River estuary, wetland vegetation, wetlands, Yachats River estuary, Yaquina Bay}, url = {https://ir.library.oregonstate.edu/concern/technical_reports/tt44ps38k }, author = {Brophy, Laura S. and Ewald, Michael J.} } @book {80381, title = {Oregon Estuarine Invertebrates: Rudy{\textquoteright}s Illustrated Guide to Common Species}, volume = {1-3}, year = {2017}, note = {"Original edition by Paul and Lynn Rudy." Volume 1. Cnidaria, Nemertea, Annelida, Sipuncula -- , Volume 2. Arthropoda -- , Volume 3. Mollusca, Phoronida, Echinodermata, Chordata, appendices. Advances in genetics have revolutionized the classification of aquatic invertebrates. Many animals have been given new names that more accurately reflect their relationships with other species. For this reason, it was necessary to create a new edition of Paul and Lynn Rudy{\textquoteright}s classic {\textquotedblleft}Oregon Estuarine Invertebrates.{\textquotedblright} This third edition is a vast, although not quite complete, three-volume expansion of the original work. Rudy{\textquoteright}s original line drawings have been retained. There is a new section on taxonomy, and most descriptive sections have been expanded. The bibliography section has been brought up-to-date with contemporary references. The invaluable {\textquotedblleft}Possible Misidentifications{\textquotedblright} section has been expanded. A few species not yet updated will follow. This magnum opus is available on the internet and should be referenced by anyone wanting to identify and learn more about these familiar, fascinating animals.}, publisher = {University of Oregon Libraries, Oregon Institute of Marine Biology}, organization = {University of Oregon Libraries, Oregon Institute of Marine Biology}, edition = {3rd ed.}, chapter = {865 p.}, address = {[Charleston, Oregon] }, keywords = {annelids, aquatic invertebrates, aquatic worms, arthropods, bibliography, brachiopods, cnidarians, echinoderms, general, identification, molluscs, segmented worms, taxonomy, tunicates}, url = {https://scholarsbank.uoregon.edu/xmlui/handle/1794/18839 }, author = {Hiebert, Terra C. and Butler, Barbara and Shanks, Alan L. and Rudy, Paul} } @article {82051, title = {Tidal Wetland Landward Migration Zones (LMZs) for 4.7 Ft Sea Level Rise for the Yaquina Bay Estuary [cartographic material]}, year = {2017}, note = {This map is associated with the report, {\textquotedblleft}Modeling Sea Level Rise Impacts to Oregon{\textquoteright}s Tidal Wetlands: Maps and Prioritization Tools to Help Plan for Habitat Conservation into the Future.{\textquotedblright} It depicts the upper end of a possible sea-level rise scenario based on the West Coast Sea Level Rise Study (National Research Council, 2012). This map shows a possible rise in sea level of 4.7 feet by the year 2100. It depicts possible migrations of wetland plants from inundated areas to new wetlands based on factors such as land use, zoning and built structures. {\textquotedblleft}Prepared for: MidCoast Watersheds Council, Newport, Oregon.{\textquotedblright} {\textquotedblleft}With assistance from: Fran Recht, Pacific States Marine Fisheries Commission.{\textquotedblright} }, month = {2017, Aug. 27}, pages = {1 p.}, publisher = {Institute for Applied Ecology}, address = {Corvallis, Or.}, keywords = {climate, habitats, human impacts, land use, salinity, sea level, wetland vegetation, wetlands, Yaquina River Estuary}, url = {https://ir.library.oregonstate.edu/concern/technical_reports/70795d910 }, author = {Brophy, Laura S. and Ewald, Michael J.} } @conference {80446, title = {Tsunami risk for insurance portfolios from megathrust earthquakes in Cascadia Subduction Zone}, booktitle = {World Conference on Earthquake Engineering (16th)}, year = {2017}, note = {This paper is one step in a process to develop for the insurance industry {\textquotedblleft}a comprehensive tsunami risk assessment for coastal cities on west of USA and [to] improve the risk management due to large tsunamis.{\textquotedblright} The authors developed tsunami hazard maps for the West Coast and modeled many different factors including subsidence and uplift. Colored maps, charts. p.1-12.}, month = {2017, Jan.9-13}, pages = {p.1-12}, address = {Santiago, Chile}, keywords = {Cape Mendicino (Ca.), coastal hazards, Crescent City (Ca.), earthquakes, Humboldt Bay (Ca.), Long Beach (Wa.), mathematical modeling, Newport (Or.), Seaside (Or.), tsunamis}, url = {https://tinyurl.com/ycmslwc8 }, author = {Farahani, R. J. and Woessner, J. and Bingi, S. and Charvet, I. and Williams, Ch. and Nyst, M. and Masuda, M.} } @article {83059, title = {Western Oregon adult coho salmon, 2017 spawning survey data report}, volume = {no. OPSW-ODFW-2018-3}, year = {2017}, note = {Good statistics on salmon runs. Before 2017, this publication was called, Status of Oregon stocks of coho salmon.}, month = {2019, Jan.}, pages = {33 p.}, institution = {Oregon Adult Salmonid Inventory \& Sampling Project, ODFW}, address = {Corvallis, Or.}, keywords = {abundance, Alsea River, Beaver Creek (Lincoln), Coho salmon = Oncorhynchus kisutch, Coos Bay, Coquille River, fecundity, Floras Creek, geographic distribution, hatchery salmonids, Necanicum River, Nehalem River, Nestucca River, North Umpqua River, Salmon River, Siletz River, Siuslaw River, Sixes River, South Umpqua River, temporal distribution, Tillamook Bay, Umpqua River, wild salmonids, Yaquina River}, url = {https://digital.osl.state.or.us/islandora/object/osl\%3A814196/datastream/OBJ/download/2017.pdf }, author = {Sounhein, Briana and Brown, Eric and Lewis, Mark and Weeber, Matt} } @article {82046, title = {Yaquina Bay Estuary Current vs. 4.7ft SLR Map [cartographic material]}, year = {2017}, note = {This map is associated with the report, {\textquotedblleft}Modeling Sea Level Rise Impacts to Oregon{\textquoteright}s Tidal Wetlands: Maps and Prioritization Tools to Help Plan for Habitat Conservation into the Future.{\textquotedblright} It depicts the upper end of a possible sea-level rise scenario based on the West Coast Sea Level Rise Study (National Research Council, 2012) contrasted with the current extent of tidal wetlands in the Yaquina River estuary. Areas projected to become open water or tidal mudflat are shown, as well as areas projected to become new tidal wetlands. {\textquotedblleft}With assistance from: Fran Recht, Pacific States Marine Fisheries Commission.{\textquotedblright} {\textquotedblleft}Prepared for: MidCoast Watersheds Council, Newport, Oregon.{\textquotedblright} }, month = {2017, Aug. 27}, pages = {1 p.}, publisher = {Institute for Applied Ecology}, address = {Corvallis, Or.}, keywords = {climate, habitats, human impacts, land use, salinity, sea level, wetland vegetation, wetlands, Yaquina River Estuary}, url = {https://ir.library.oregonstate.edu/concern/technical_reports/5q47rt93r }, author = {Brophy, Laura S. and Ewald, Michael J.} } @article {80276, title = {Effect of climate change on water temperature and attainment of water temperature criteria in the Yaquina Estuary, Oregon (USA)}, journal = {Estuarine, Coastal and Shelf Science}, volume = {169}, year = {2016}, note = {This paper examines the effects of climate change, which is predicted to cause warmer air temperatures and higher sea levels on the Yaquina Estuary. {\textquotedblleft}Temperature is the most common cause of water quality impairments in Oregon coastal streams and estuaries (US EPA, 2006) and climate change is likely to increase the frequency and duration of these water quality impairments.{\textquotedblright} (p.137) Data for this study was gathered from 2000-2004 and supplemented by historical data from 1970-2010. The data was used to model changes in the estuary based on projected sea level rises of 0-90 cm and projected air temperature increases of 0-4{\textdegree} C to show potential changes from the present to the year 2100. The upper estuary was shown to be the most vulnerable to climate change. Rising sea level, a factor not considered in previous studies, may moderate the effect of climate change on the lower estuary.}, pages = {p.136-146}, keywords = {Blodgett (Or.), Chitwood (Or.), climate, Elk City (Or.), Elk Creek, Hatfield Marine Science Center, mathematical modeling, Newport (Or.), sea level, Toledo (Or.), water quality, water temperature, Yaquina Bay, Yaquina River}, doi = {doi:10.1016/j.ecss.2015.11.006 }, url = {https://ir.library.oregonstate.edu/concern/articles/3r074w80k}, author = {Brown, Cheryl A. and Sharp, Darrin and Mochon Collura, T. Chris} } @article {77366, title = {Genetic evidence supports recolonization by Mya arenaria of western Europe from North America}, journal = {Marine Ecology Progress Series}, volume = {549}, year = {2016}, note = {The softshell clam is found in North America and in Europe. Its origin has been debated. We know that this clam was transplanted by humans to western North America. But where did it come from? Were there refuges in southern Europe where the clam survived the hardships of the Ice Ages? Did it migrate to North America from Europe, or was the migration in the other direction? In this article, the authors report on genetic analysis and conclude that the species originated in eastern North America and subsequently colonized Europe. Specimens from Alsea Bay and Yaquina Bay were part of the analysis. }, month = {2016}, pages = {p.99-112}, keywords = {Yaquina Bay, Alsea Bay, Softshell clam = Mya arenaria, genetics, population biology, geographic distribution,}, doi = {doi: 10.3354/meps11672}, url = {https://www.int-res.com/articles/meps2016/549/m549p099.pdf}, author = {Cross, M.E. and Bradley, C. R. and Cross, T. F. and Culloty, S. and Lynch, S. and McGinnity, P. and O{\textquoteright}Riordan, R. M. and Vartia, S. and Prod{\H o}hl, P. A.} } @article {77296, title = {Genomic and phylogenetic analysis of Ceramium cimbricum (Ceramiales, Rhodophyta) from the Atlantic and Pacific Oceans supports the naming of a new invasive Pacific entity Ceramium sungminbooi sp. Nov.}, journal = {Botanica Marina}, volume = {59A}, year = {2016}, note = {The flow of introduced species across the Pacific Ocean is from East to West. That is, most introduced species on the U.S. West Coast come from Asia. This is true in the case of Ceramium sungminbooi, a red alga from Korea. This article describes the distinction between the Asian type of Ceramium as opposed to the European species, Ceramium cimbricum and calls for the Asian species now on the American West Coast to be recognized as a new species. {\textquotedblleft}It is unknown whether C. sungminbooi was introduced to Oregon as a result of oyster mariculture or if it was hull-borne.{\textquotedblright} (p.219) Free access to an ahead-of-print version of this article is available.}, month = {2016}, pages = {p.211-222}, keywords = {aquatic vegetation, Coos Bay, genetics, Hatfield Marine Science Center, introduced species, new species description, red algae, taxonomy, Yaquina Bay}, doi = {doi 10.1515/bot-2016-0036}, author = {Hughey, Jeffery R. and Boo, Ga Hun} } @mastersthesis {77346, title = {An Integrated Approach to the Investigation of Age, Growth and Population Dynamics of Burrowing Thalassinidean Shrimps in a U.S. West Coast Estuary}, year = {2016}, note = {{\textquotedblleft}Two indigenous species of burrowing shrimp inhabit and often dominate the intertidal zone of estuaries along the US West Coast, the ghost shrimp, Neotrypaea californiensis, and the blue mud shrimp, Upogebia pugettensis. Both species are considered ecosystem engineers and play a role in maintaining estuarine health and ecosystem function. They also have a negative interaction with oyster production in Pacific Northwest (PNW) estuaries, which has necessitated a better understanding of their ecology and population dynamics in order to try to manage their impacts{\textquotedblright} (from the Abstract). Laboratory and field experiments explored growth and aging in the two species, and population simulations explored shrimp density. Co-major professors were Christopher J. Langdon and Brett R. Dumbauld.}, pages = {184 p.}, school = {Oregon State University}, type = {Doctoral Dissertation}, edition = {Ph. D.}, chapter = {Dept. of Fisheries and Wildlife, Fisheries Science}, address = {Corvallis, Or.}, keywords = {age composition, crustaceans, decapods, geographic distribution, Ghost shrimp = Neotrypaea californiensis (Callianassa californiensis), Hatfield Marine Science Center, Idaho Flats, mathematical modeling, Mud shrimp = Upogebia pugettensis, Oysterville, population biology, Raccoon Flat, Sally{\textquoteright}s Bend, Seawall Island, Tongue Island, Yaquina Bay}, url = {https://ir.library.oregonstate.edu/concern/graduate_thesis_or_dissertations/r781wj64j}, author = {Bosley, Katelyn Marie} } @article {77266, title = {Resilience of Oregon Coastal Communities in Response to External Stressors}, year = {2016}, note = {Oregon{\textquoteright}s coastal communities have seen sweeping changes, from environmental conditions, to natural resource utilization, to economic and regulatory developments. {\textquotedblleft}This report tells the story of six Oregon coastal communities and how they have perceived and tried to respond to the myriad stressors they are experiencing. . . The results of this study provide a glimpse into the day-to-day, season-to-season struggles in these communities, and the array of responses, some effective and others not.{\textquotedblright} (p.1) Those who care about Oregon{\textquoteright}s coastal communities will find this report a valuable resource. {\textquotedblleft}A project submitted in partial fulfillment of the requirements for the degree of Master of Science (Natural Resources and Environment) at the University of Michigan{\textquotedblright} {\textquotedblleft}Client: Oregon Dept. of Fish and Wildlife{\textquotedblright}}, month = {2016, Aug}, pages = {236 p.}, institution = {University of Michigan. Dept. of Natural Resources and the Environment,}, keywords = {coastal hazards, commercial fisheries - groundfish, demographics, depleted populations, Depoe Bay (Or.), economics, environmental law and policy, Florence (Or.), Garibaldi (Or.), Gold Beach (Or.), human impacts, natural resource management, Newport (Or.), Port Orford (Or.), recreational fisheries - groundfish, salmon, shellfish, tourism}, url = {https://tinyurl.com/y5za7urw}, author = {Ackerman, Richard and Neuenfeldt, Rachel and Eggermont, Theo and Burbidge, Mike and Lehrman, Joanna and Wells, Nathan and Chen, Xi} } @article {77321, title = {Slow shell building, a possible trait for resistance to the effects of acute ocean acidification}, journal = {Limnology and Oceanography}, volume = {61}, year = {2016}, note = {Anthropogenic increases in carbon dioxide in the atmosphere have led to acidification of the oceans. More acidic ocean water profoundly affects development of shellfish, and has had a huge impact on shellfish growers in the Pacific Northwest. The Pacific oyster, which originates in Japan, and has historically been the most commonly grown species, seems to be particularly sensitive to ocean acidification. The native Olympia oyster has a different life history and a slower rate of development than the Pacific oyster. In this paper, the authors explore the process of slow shell-building in Olympia oysters in acidic waters and consider implications for potential resiliency in adverse environmental conditions in this and other shellfish species. }, month = {2016}, pages = {p.1969-1983}, keywords = {Yaquina Bay, Hatfield Marine Science Center, Oregon Oyster Farms, Netarts Bay, Whiskey Creek, Pacific oyster = Crassostrea gigas, Olympia oyster=Ostrea lurida (Ostrea conchaphila), aquaculture, molluscs, bivalves, oysters, ocean acidification, human imp}, doi = {doi: 10.1002/lno.10348}, author = {Waldbusser, George G. and Gray, Matthew W. and Hales, Burke and Langdon, Christopher J. and Haley, Brian A. and Gimenez, Iria and Smith, Stephanie R. and Brunner, Elizabeth L. and Hutchinson, Greg} } @article {83057, title = {Status of Oregon stocks of coho salmon}, volume = {no.OPSW-ODFW-2017-3}, year = {2016}, note = {Good statistics on coho runs. After 2016, this report{\textquoteright}s title changes to {\textquotedblleft}Western Oregon Adult Coho Salmon Spawning Survey Data Report.{\textquotedblright}}, month = {2016, Nov.}, pages = {48 p.}, institution = {Oregon Adult Salmonid Inventory \& Sampling Project, ODFW}, address = {Corvallis, Or.}, keywords = {abundance, Alsea River, Beaver Creek (Lincoln), Coho salmon = Oncorhynchus kisutch, Coos Bay, Coquille River, fecundity, Floras Lake, geographic distribution, hatchery salmonids, Necanicum River, Nehalem River, Nestucca River, North Umpqua River, Salmon River, Siletz River, Siltcoos Creek, Siuslaw River, Sixes River, South Umpqua River, Tahkenitch Creek, temporal distribution, Tenmile Creek, Tillamook Bay, Umpqua River, wild salmonids, Yaquina River}, url = {https://nrimp.dfw.state.or.us/DataClearinghouse/default.aspx?p=202\&XMLname=41722.xml}, author = {Sounhein, Briana and Brown, Eric and Lewis, Mark and Weeber, Matt} } @mastersthesis {76686, title = {An Experimental Investigation of the Effects of Temperature and Dissolved Oxygen on the Growth of Juvenile English Sole and Juvenile Dungeness Crab}, year = {2015}, note = {This M.S. thesis describes laboratory simulations of typical summer oceanographic conditions at Yaquina Bay and Moolack Beach, two nursery habitats used by juvenile English sole and Dungeness crab. Simulations explored effects of temperature and dissolved oxygen levels on the two species, particularly as related to upwelling-driven hypoxia. Young English sole were more resilient and were able to handle lower oxygen levels than Dungeness crabs. The author also describes an exhibit explaining hypoxia to the general public at the Hatfield Marine Science Center in Newport, Oregon. Major professor was Lorenzo Ciannelli.}, pages = {115 p.}, school = {Oregon State University}, type = {Masters Thesis}, edition = {M.S.}, chapter = {College of Earth, Ocean, and Atmospheric Sciences. Marine Resources Management Program}, address = {Corvallis, Or.}, keywords = {crustaceans, decapods, dissolved oxygen, Dungeness crab = Metacarcinus magister (Cancer magister), English sole = Parophrys vetulus, hypoxia, juvenile fish, Moolack Beach, theses, water temperature, Yaquina Bay}, url = {https://ir.library.oregonstate.edu/concern/graduate_thesis_or_dissertations/js956k41j}, author = {Bancroft, Morgan P.} } @article {76596, title = {A method to identify estuarine water quality exceedances associated with ocean conditions}, journal = {Environmental Monitoring and Assessment}, volume = {187}, year = {2015}, note = {Major coastal upwelling events bring water that is low in oxygen and high in nutrients closer to the surface, at times killing marine animals. Upwelled waters can and do enter estuaries. Is there a way to distinguish poor water quality in estuaries that results from upwelling events from poor water quality derived from other causes? The authors introduce an example of logistic regression models {\textquotedblleft}to predict the probability of exceedance of a water quality threshold{\textellipsis}{\textquotedblright} Yaquina Bay is used as the example, and remaining issues are discussed.}, month = {2015, Mar.}, pages = {14 p.}, keywords = {chlorophyll, climate, dissolved oxygen, mathematical modeling, salinity, upwelling, water quality, water temperature, Yaquina Bay}, doi = {10.1007/s10661-015-4347-3}, author = {Brown, Cheryl A. and Nelson, Walter G.} } @article {80486, title = {Salmonid life-cycle monitoring in western Oregon streams, 2012-2014}, volume = {no. OPSW-ODFW-2015-2}, year = {2015}, note = {Beginning in 1997, the Oregon Dept. of Fish and Wildlife began monitoring the migration and survival of salmonids. This publication gives data gathered by ODFW to estimate the abundance of adult salmonids, to estimate the number of juvenile salmonids migrating downstream, and to estimate the survival rates in marine and fresh waters for coho salmon. This report covers research done from 2012-2014 and gives excellent data for monitored basins.}, pages = {110 p.}, institution = {Oregon Dept. of Fish and Wildlife}, address = {Salem, Or.}, keywords = {Cascade Creek (Alsea), chum salmon = Oncorhynchus keta, Coho salmon = Oncorhynchus kisutch, cutthroat trout = Oncorhynchus clarki, depleted populations, EF Trask River, hatcheries{\textquotedblright}, hatchery salmonids, Mill Creek (Siletz), Mill Creek (Yaquina), NF Nehalem River, population count, steelhead trout = Oncorhynchus mykiss, West Fork Smith River (Umpqua), wild salmonids, Winchester Creek (Coos Bay), {\textquotedblright} {\textquotedblleft}Chinook salmon = Oncorhynchus tshawytscha}, url = {https://tinyurl.com/2p9fkj85}, author = {Suring, Erik and Burns, Patrick and Constable, Ronald J. Jr. and Lorion, Chris M. and Wiley, Derek J. and Oregon Dept. of Fish and Wildlife,} } @article {83056, title = {Status of Oregon stocks of coho almon, 2015}, volume = {no.OPSW-ODFW-2016-3}, year = {2015}, note = {Good statistics on coho runs.}, month = {2015, Oct.}, pages = {46 p.}, institution = {Oregon Adult Salmonid Inventory \& Sampling Project, ODFW}, address = {Corvallis, Or.}, keywords = {abundance, Alsea River, Beaver Creek (Lincoln), Coho salmon = Oncorhynchus kisutch, Coos Bay, Coquille River, fecundity, Floras Lake, geographic distribution, hatchery salmonids, Necanicum River, Nehalem River, Nestucca River, North Umpqua River, Salmon River, Siletz River, Siltcoos Creek, Siuslaw River, Sixes River, South Umpqua River, Tahkenitch Creek, temporal distribution, Tenmile Creek, Tillamook Bay, Umpqua River, wild salmonids, Yaquina River}, url = {https://nrimp.dfw.state.or.us/DataClearinghouse/default.aspx?p=202\&XMLname=41721.xml}, author = {Sounhein, Briana and Brown, Eric and Lewis, Mark and Weeber, Matt} } @book {83263, title = {Yaquina Bay Dock \& Dredge and Yaquina Bay Harbor improvements from 1947-1960}, year = {2015}, note = {This book is essentially a compilation of newspaper clippings, documents and family photographs. It gives the history of an important leader in the development of Newport{\textquoteright}s harbor: the Yaquina Bay Dock \& Dredge Company. The company was founded by Frank Chamberlain and the book gives some of the history of the Chamberlain family. The book is almost all clippings; it suffers from a lack of narrative or editorial commentary. It Is an interesting approach to the history of a family that contributed to the development of one of Oregon{\textquoteright}s major ports.}, month = {2015, Dec.}, publisher = {Paper Trails Publishing}, organization = {Paper Trails Publishing}, chapter = {135 p.}, address = {Bend, Or.}, keywords = {dredging, harbors, historical, industrial development, navigation, Newport (Or.), ports}, author = {Beal, Suzy (compiler)} } @article {76331, title = {Differential drivers of benthic foraminiferal and molluscan community composition from a multivariate record of early Miocene environmental change}, journal = {Paleobiology}, volume = {40 }, year = {2014}, note = {This is a study of the early Miocene Newport member of the Astoria Formation. The Newport Member was deposited about 20.26-18 million years ago. It offers an approximately 2 million year {\textquotedblleft}time series of benthic foraminifera and molluscs from continental shelf depths, allowing investigation of both groups in the same record.{\textquotedblright} (p.399) Since there was an interval of global warming in this time period, the authors wondered what the sediments would tell researchers about how marine environments reacted to climate change. The answer is {\textellipsis} complicated. As the authors observe, {\textquotedblleft}Environmental changes are multivariate in nature.{\textquotedblright} (p.414) A most interesting look at a complex subject.}, month = {2014, Summer}, pages = {p. 398-416}, keywords = {aquatic invertebrates, Beverly Beach State Park, bivalves, carbon, climate change, foraminifera, geology, Jump-Off Joe, molluscs, Moolach Beach, oxygen, paleontology, paleosciences, primary productivity, Schooner Point, sediments, temperature, Wade Creek, Yaquina Head}, doi = {10.1666/13019}, author = {Belanger, Christina L. and Villarosa Garcia, Marites} } @article {76436, title = {Nursery Functions of U.S. West Coast Estuaries: The State of Knowledge for Juveniles of Focal Invertebrate and Fish Species}, year = {2014}, note = {This report summarizes what is known about the role of estuaries as nurseries for important aquatic species. The authors inventoried 303 West Coast estuaries and categorized each by class (lagoonal, riverine, embayment and sound) and subclass (estuarine coastal subtidal, tidal channel/creek, slough and lagoon). They examined 15 different species that used estuaries and noted what is known and not known about their life cycles and use of estuaries. {\textquotedblleft}Together with the estuary inventory and the geodatabase, this report represents the first stage in a larger effort to better understand the nursery functions of West Coast estuaries for fish and invertebrates.{\textquotedblright} (p.3)}, pages = {168 p.}, institution = {The Nature Conservancy}, address = {Arlington, Va.}, keywords = {aquatic invertebrates, Bat stingray = Myliobatus californicus (Aetobatus californicus), Bay shrimp = Crangon franciscorum, Brown rockfish = Sebastes auriculatus, California halibut = Paralichthys californicus, Chinook salmon = Oncorhynchus tshawytscha, Coho salmon = Oncorhynchus kisutch, crustaceans, Dungeness crab = Metacarcinus magister (Cancer magister), eelgrass = Zostera marina, English sole = Parophrys vetulus, estuaries, fishes, general, geographic distribution, Green sturgeon = Acipenser medirostris, habitats, juvenile fish, Leopard shark = Triakis semifasciata, life history information, Oregon, Pacific Coast, Pacific herring = Clupea pallasi, Pacific staghorn sculpin = Leptocottus armatus, Shiner perch = Cymatogaster aggregate, Starry flounder = Platichthys stellatus, steelhead trout = Oncorhynchus mykiss}, url = {https://www.scienceforconservation.org/products/nursery-functions-of-estuaries}, author = {Hughes, Brent B. and Levey, Matthew D. and Brown, Jennifer A. and Fountain, Monique C. and Carlisle, Aaron B. and Litvin, Steven Y. and Greene, Correigh M. and Heady, Walter N. and Gleason, Mary G.} } @article {76731, title = {Status of Oregon stocks of coho salmon, 2013}, volume = {no.OPSW-ODFW-2014-3}, year = {2014}, note = {Good statistics on coho runs.}, pages = {55 p.}, institution = {Oregon Adult Salmonid Inventory \& Sampling Project, ODFW}, address = {Corvallis, Or.}, keywords = {abundance, Alsea River, Beaver Creek, Coho salmon = Oncorhynchus kisutch, Coos Bay, Coquille River, Floras Lake, geographic distribution, hatchery salmonids, Necanicum River, Nehalem River, Nestucca River, Salmon River, Siletz River, Siltcoos Creek, Siuslaw River, Sixes River, Tahkenitch Creek, temporal distribution, Tenmile Creek, Tillamook Bay, Umpqua River, wild salmonids, Yaquina River}, url = {https://library.state.or.us/repository/2012/201210151135331/2013.pdf}, author = {Sounhein, Briana and Brown, Eric and Lewis, Mark and Weeber, Matt} } @article {51351, title = {Geographic range and structure of cryptic genetic diversity among Pacific North American populations of the non-native amphipod Grandidierella japonica}, journal = {Biological Invasions}, volume = {15}, year = {2013}, note = {In this article, the authors attempt to reconstruct the invasion history of the introduced amphipod Gradidierella japonica. DNA analysis shows two distinct groups {\textendash} one from San Francisco south, and the other north of San Francisco. There are significant genetic differences between the two groups, which, coupled with low genetic diversity within each group, suggests that there were two separate introductions of this species to the West Coast.}, month = {2013}, pages = {p.2415{\textendash}2428}, keywords = {amphipods, Columbia River estuary, Coos Bay, crustaceans, genetics, Grandidierella japonica, introduced species, Puget Sound, San Francisco Bay, Umpqua River estuary, Winchester Bay, Yaquina Bay}, doi = {10.1007/s10530-013-0462-7}, author = {Pilgrim, Erik M. and Blum, Michael J. and Reusser, Deborah A. and Lee II, Henry and Darling, John A.} } @article {49771, title = {In situ13C tracer experiments elucidate carbon translocation rates and allocation patterns in eelgrass Zostera marina}, journal = {Marine Ecology Progress Series}, volume = {487}, year = {2013}, note = {In this project, native seagrass was studied in summer and in winter using carbon-13 as a tracer to monitor changes in carbon uptake. {\textquotedblleft}The results provide important estimates of carbon uptake and translocation that can be used to better understand whole plant carbon budgets as well as the transfer of seagrass-derived carbon to other trophic communities.{\textquotedblright} (from the Abstract)}, pages = {p.27-39}, keywords = {carbon, eelgrass = Zostera marina, isotopes, Yaquina Bay}, doi = {10.3354/meps10354}, url = {https://www.int-res.com/articles/meps2013/487/m487p027.pdf}, author = {Kaldy, James E. and Brown, Cheryl A. and Andersen, Christian P.} } @article {83162, title = {Port of Toledo Strategic Business \& Capital Investment Plan: Final Report, March, 2013}, year = {2013}, note = {Colored maps, architectural drawings}, pages = {49 p.}, keywords = {Depot Slough, dredging, economics, industrial development, navigation, physical modification, Port of Toledo, ports, Tokyo Slough, Toledo (Or.), Yaquina River}, url = {https://www.portoftoledo.org/_files/ugd/58cab9_166bc84dea7d408a88a760e42d8c04d0.pdf}, author = {Port of Toledo (Or.),} } @article {36491, title = {Tidal wetlands of the Yaquina and Alsea River estuaries, Oregon: Geographic Information Systems layer development and recommendations for National Wetlands Inventory revisions}, volume = {no.2012{\textendash}1038}, year = {2013}, note = {{\textquotedblleft}Geographic Information Systems (GIS) layers of current, and likely former, tidal wetlands in two Oregon estuaries were generated by enhancing the 2010 National Wetlands Inventory (NWI) data with expert local field knowledge, Light Detection and Ranging-derived elevations, and 2009 aerial orthophotographs. Data were generated for two purposes: First, to enhance the NWI by recommending revised Cowardin et al. (1979) classifications for certain NWI wetlands within the study area; and second, to generate GIS data for the 1999 Yaquina and Alsea River Basins Estuarine Wetland Site Prioritization study{\textellipsis}. The GIS products of this project improve the accuracy and utility of the NWI data, and provide useful tools for estuarine resource management.{\textquotedblright} (from the Abstract) Color maps. Appendix A includes excellent color photographs of wetland sites and plants. }, pages = {60 p.}, institution = {U.S. Geological Survey}, address = {Reston, Va.}, keywords = {Alsea Bay, Alsea River, Bain Slough, Boone Slough, Depot Slough, Drift Creek, Eckman Slough, geographic information system, hydrography, Idaho Flats, Lint Slough, maps, McCaffery Slough, Nute Slough, Olalla Slough, Pooles Slough, Risley Creek, salinity, salt marsh, wetland delineation, wetland vegetation, wetlands, Yaquina Bay, Yaquina River}, url = {https://pubs.usgs.gov/of/2012/1038/pdf/ofr2012-1038.pdf}, author = {Brophy, Laura S. and Reusser, Deborah A. and Janousek, Christopher N. and Green Point Consulting, and U.S. Geological Survey, and U.S.Environmental Protection Agency,} } @article {34481, title = {Estuary Inhabitants Species List for Yaquina and Coos Bays, Oregon}, year = {2012}, note = {The Marine Bioinvasions Lab is located at Oregon State University{\textquoteright}s Hatfield Marine Science Center. A major focus is identification of native, introduced and invasive species found in Oregon{\textquoteright}s estuaries. This spreadsheet is the most up to date list of the marine algae and invertebrates in the Yaquina and Coos Bays. This list is not complete and will never be done. It is a combination of prior inventories of estuary species and observations by active taxonomists. The date at the top of the spreadsheet is the most recent version. References are included. A valuable resource in tracking introduced species in Yaquina and Coos Bay. Includes charts.}, keywords = {algae, annelids, bryozoans, cnidarians, Coos Bay, crustaceans, introduced species, molluscs, nemerteans, species composition, species list, sponges, tunicates, Yaquina Bay}, url = {https://ir.library.oregonstate.edu/concern/datasets/h415pf72z}, author = {Chapman, John W. and Breitenstein, Ralph Arthur and Marine Bioinvasions Lab,} } @article {34526, title = {Genetic diversity, endemism and phylogeny of lampreys within the genus Lampetra sensu stricto (Petromyzontiformes: Petromyzontidae) in western North America}, journal = {Journal of Fish Biology}, volume = {81}, number = {6}, year = {2012}, note = {Describes the phylogenetic relationships between West Coast lamprey populations. The Siuslaw River brook lamprey population was among the most genetically distinct.}, month = {2012, Nov.}, pages = {p.1891-1914}, keywords = {Alsea River, Coos River, Cow Creek, East Fork Millicoma River, Fishawk Creek, genetics, Mill Creek, Necanicum River, Nehalem River, North Fork Siuslaw River, Pacific lamprey = Entosphenus tridentatus (Lampetra tridentata), River lamprey = Lampetra ayresi, Siuslaw River, taxonomy, Umpqua River, Western brook lamprey = Lampetra richardsoni, Wilson River, Yaquina River}, doi = {10.1111/j.1095-8649.2012.03417.x}, author = {Boguski, D. A. and Reid, S. B. and Goodman, D. H. and Docker, M. F.} } @article {36201, title = {Hatfield Marine Science Center Dynamic Revetment Report DSL Permit $\#$45455-FP Monitoring Report February, 2012}, year = {2012}, note = {This is the first of a series of five annual reports concerning control of erosion along Yaquina Bay next to the Hatfield Marine Science Center. Parts of the shoreline were stabilized in 2007 and 2011. Before more dynamic revetments will be permitted, a five-year study of nearby unmodified shorelines is required. {\textquotedblleft}A Dynamic Revetment (gravel beach) was installed in November, 2011 on the shoreline along the northeastern edge of the HMSC to mitigate erosion that threatened HMSC critical infrastructure. Shoreline topographic and biological monitoring was initiated before and continued after the project completion. Monitoring of beach profiles along the project area showed that a Dynamic Revetment installed in 2007 had been successful in stabilizing further retreat of the beach. As of January 2012, the2011 project also appears to have stabilized the shoreline, while rapid erosion has continued in the adjacent Reference beach area. {\textquotedblleft} (from the Abstract) The report includes aerial photographs, charts and color photographs.}, pages = {31 p.}, institution = {Oregon State University. Hatfield Marine Science Center}, address = {Newport, Or.}, keywords = {American Coot = Fulica Americana, amphipods, aquatic invertebrates, beach wrack, beaches, benthos, birds, coastal hazards, erosion, fish, Hatfield Marine Science Center, Pacific staghorn sculpin = Leptocottus armatus, physical, Shiner perch = Cymatogaster aggregate, species list, terrestrial vegetation, wave height data, Yaquina Bay}, url = {https://ir.library.oregonstate.edu/concern/administrative_report_or_publications/xd07gt292}, author = {Boehlert, George and Nelson, Walt and Allan, Jonathan and Harris, Erica and Stephensen, Shawn and Politano, Vincent and Folger, Christina L.} } @mastersthesis {36166, title = {Microsatellite and Mitochondrial DNA Analysis of Dungeness Crab (Cancer magister) from California to Northern British Columbia}, volume = {M.S.}, year = {2012}, note = {In the summer of 2009, the author did genetic sampling on 20-25 crabs at each of 14 locations along the U.S. West Coast, from Iceberg Bay, British Columbia to San Luis Obispo, California. Both mitochondrial DNA and microsatellite nuclear markers were sampled. {\textquotedblleft}The objective of this study was to investigate the genetic connectivity of Dungeness crab between central California and northern British Columbia using both mitochondrial DNA and nuclear markers (microsatellites). We sampled adult Dungeness crab across ~2500 km of the Pacific coastline to test for signals of population substructure and limitations to gene flow across the ecological range.{\textquotedblright} (p.3)}, pages = {31 p.}, school = {San Jose State University}, address = {San Jose, Calif.}, keywords = {Alsea Bay, biology, crustaceans, decapods, Dungeness crab = Metacarcinus magister (Cancer magister), genetics, life history information, population biology, Yaquina Bay}, url = {https://scholarworks.sjsu.edu/etd_theses/4222/}, author = {Barney, Bryan Thomas} } @article {82481, title = {A Conservation Assessment of West Coast (USA) Estuaries}, year = {2011}, note = {{\textquotedblleft}Funded by: The David and Lucile Packard Foundation{\textquotedblright} {\textquotedblleft}This assessment outlines an enhanced planning approach for West Coast estuaries that incorporates an evaluation of the regional context for estuarine conservation and recommends an approach to site-scale planning with more focus on ecological processes and functions.{\textquotedblright} (p.1) {\textquotedblleft}A hierarchical classification system was developed for West Coast estuaries that identified three regions (based on climate, latitude, and oceanography) and four estuary types distinguished by the relative degree of influence of the hydrodynamic forcing mechanisms of waves, tides, and rivers.{\textquotedblright} (p.2)}, pages = {65 p.}, institution = {The Nature Conservancy}, address = {Arlington, Va. }, keywords = {Agriculture, Alsea Bay, estuarine dynamics, habitats, human impacts, hydrology, land ownership, land use, logging, mathematical modeling, Netarts Bay, Salmon River, Siletz Bay, Siuslaw River, Tillamook Bay, Umpqua River, Yaquina River}, url = {https://ir.library.oregonstate.edu/concern/defaults/1r66j546d}, author = {Gleason, Mary G. and Newkirk, Sarah and Merrifield, Matthew S. and Howard, Jeanette and Cox, Robin and Webb, Megan and Koepcke, Jennifer and Stranko, Brian and Taylor, Bethany and Beck, Michael W. and Fuller, Roger and Dye, Paul and Vander Schaaf, Dick and Carter, Jena} } @proceedings {51386, title = {Effects of climate change on water quality in the Yaquina Estuary, Oregon [PowerPoint presentation]}, year = {2011}, note = {PowerPoint presentation discussing the effects climate change will have on the Yaquina Estuary. Maps, aerial photographs, charts.}, keywords = {air temperature, climate change, Criteser{\textquoteright}s Moorage, Elk City, Oneatta Point, precipitation, salinity, water temperature, Yaquina Bay, Yaquina River Estuary}, url = {https://ir.library.oregonstate.edu/concern/conference_proceedings_or_journals/d217qq309}, author = {Brown, Cheryl A. and Sharp, Darrin and Chang, Heejun and Steele, Madeline} } @article {34441, title = {Historic and recent patterns of dissolved oxygen in the Yaquina Estuary (Oregon, USA): Importance of anthropogenic activities and oceanic conditions}, journal = {Estuarine, Coastal and Shelf Science}, volume = {92}, number = {3}, year = {2011}, note = {Dissolved oxygen (DO) levels in estuaries can drop due to human activities. They can also fall due to upwelling events offshore."This paper assesses whether there have been long-term changes in DO levels in the Yaquina Estuary, Oregon (USA) and the effect of ocean conditions on DO levels within that estuary. In addition, it compares recent DO levels in the Yaquina Estuary to historical data from other estuaries in the region and the inner Oregon shelf to evaluate whether the hypoxia recently observed on the inner shelf has previously occurred." (from the Introduction)}, month = {2011, May 1}, pages = {p.446-455}, keywords = {anoxia, dissolved oxygen, historical, upwelling, Yaquina Bay}, doi = {10.1016/j.ecss.2011.01.018}, author = {Brown, Cheryl A. and Power, James H.} } @article {80201, title = {Oregon Bacteria Rule: Bacteria Criteria for Marine and Estuarine Waters}, year = {2011}, note = {This document describes state water quality standards for bacteria in marine and estuarine waters and compares and reconciles Oregon{\textquoteright}s standards with U.S. EPA standards. Finally, it describes how the reconciled standards may be applied to various permit scenarios. It includes maps of major estuaries showing the dividing line where the freshwater estuary yields to marine influences.}, pages = {19 p.}, institution = {Oregon Department of Environmental Quality}, address = {[Portland, Or.]}, keywords = {General, water quality, pollution, bacteria, environmental law and policy}, url = {https://www.oregon.gov/deq/Filtered\%20Library/IMDBacteria.pdf}, author = {Bohaboy, Spencer} } @article {51281, title = {Geochemistry and petrology of late Eocene Cascade Head and Yachats Basalt and alkalic intrusions of the central Oregon Coast Range, U.S.A.}, journal = {Journal of Volcanology and Geothermal Research}, volume = {198}, number = {3-4}, year = {2010}, note = {Did the volcanic rocks in the Oregon Coast Range originate from {\textquotedblleft}magmetism associated with extension of the coast ranges{\textquotedblright} or did they come from {\textquotedblleft}hot spots associated with mantle plumes,{\textquotedblright} possibly even related to the Yellowstone hot spot? (p.311) The authors of this paper use geochemical and isotopic data to inform their discussion of the probable origins of these deposits. }, month = {2010, Dec.15}, pages = {p.311-324}, keywords = {basalt, Blodgett Peak, Butler Peak, Cannibal Mountain, Cape Perpetua, Cascade Head Basalt, Cougar Mountain, geology, Heceta Head, Horner Ranch, paleosciences, Siletz River Volcanics, Table Mountain, volcanism, Yachats Basalt, Yaquina Head}, doi = {10.1016/j.jvolgeores.2010.09.016}, author = {Parker, D. F. and Hodges, F. N. and Perry, A. and Mitchener, M. E. and Barnes, M. A. and Ren, M.} } @inbook {51326, title = {Impacts of climate change on Oregon{\textquoteright}s coasts and estuaries}, booktitle = {Oregon Climate Assessment Report}, year = {2010}, note = {This is Chapter 6 of the Oregon Climate Assessment Report. Predicts {\textquotedblleft}Increased winter{\textendash}early spring flow of coastal rivers and creeks and reduced flow during summer{\textquotedblright} for the Umpqua River (p.242)}, pages = {p.211-268}, publisher = {Oregon State University. College of Oceanic and Atmospheric Sciences. Oregon Climate Change Research Institute,}, organization = {Oregon State University. College of Oceanic and Atmospheric Sciences. Oregon Climate Change Research Institute,}, address = {Corvallis, Or.}, keywords = {Alsea Bay, Alsea Spit, bacteria, Bayocean Spit, climate change, climate precipitation, coastal hazards, Columbia River estuary, Coos Bay, dissolved oxygen, El Nino, erosion, estuaries, geology, landslides, Nehalem Bay, Nehalem Spit, Neskowin (Or.), Netarts Bay, ocean acidification, Rockaway Beach, salinity, Salmon River Estuary, sea level, Siletz Bay, Tillamook Bay, water temperature, wave heights, Yachats River, Yaquina Bay}, url = {https://digital.osl.state.or.us/islandora/object/osl\%3A637577}, author = {Ruggiero, Peter and Brown, Cheryl A. and Komar, Paul D. and Allan, Jonathan C. and Reusser, Deborah A. and Lee II, Henry}, editor = {Dello, Kathie and Mote, Philip W.} } @mastersthesis {34326, title = {Interannual Differences in the Estuarine Ghost Shrimp, Neotrypaea californiensis.}, year = {2010}, note = {This thesis studies the genetics of ghost shrimp collected off the Oregon and Washington coasts. Ghost shrimp at Yaquina Bay are included "to compare differences with the ocean-bound larvae and possibly infer a relationship to any resulting recruitment." (from the Abstract) The study did find that Yaquina Bay ghost shrimp formed "a genetically distinct group" from the oceanic population. (p.32)}, pages = {39 p.}, school = {San Jose State University}, type = {Masters Thesis}, edition = {M.S.}, chapter = {Dept. of Biological Sciences}, address = {San Jose, Calif.}, keywords = {Cape Meares, Cascade Head, genetics, Ghost shrimp = Neotrypaea californiensis (Callianassa californiensis), Heceta Head, spatial distribution, theses, Yaquina Bay}, url = {https://scholarworks.sjsu.edu/etd_theses/3749/}, author = {Buncic, Michael} } @article {26766, title = {Modelling physico-chemical factors affecting occurrences of a non-indigenous planktonic copepod in northeast Pacific estuaries}, journal = {Biological Invasions}, volume = {12}, number = {5}, year = {2010}, note = {The invasive copepod Pseudodiaptomus inopinus has become established from the Coquille River in Oregon to the Chehalis River in Washington. Although the species was introduced before 1992, it had not spread beyond its 1992 distribution by 2004, indicating that it might have reached "a distributional limit." By characterizing estuaries with and without this copepod, it might be possible to identify estuaries vulnerable to future invasions. Salinity and stratification of water column temperature seem to be good predictors. The authors also identified several estuaries that might be vulnerable to this particular invader. }, pages = {p.1427-1445}, keywords = {Coos Bay, Coquille River, introduced species, Pseudodiaptomus inopinus, Siuslaw River, Tillamook Bay, Umpqua River, Yaquina River, zooplankton}, doi = {10.1007/s10530-009-9558-5}, author = {Cordell, Jeffery R. and Tear, Lucinda M. and Bollens, Stephen M.} } @article {34316, title = {Nuclear rDNA sequences of Wittrockiella amphibia (Collins) comb. nov. (Cladophorales, Chlorophyta) and morphological characterization of the mat-like growth form}, journal = {Botanica Marina}, volume = {53}, number = {4}, year = {2010}, note = {"Cladophora amphibia was found in Yaquina Bay (Oregon, USA) for the first time since the type collection from California in 1903. Vegetative plants were buried in the top centimeter of intertidal mud, partially covered by mats of Rhizoclonium and Chaetomorpha."}, pages = {p.351-356}, keywords = {algal species, Cladophora amphibia, genetics, taxonomy, Wittrockiella amphibia (Collins) comb. nov., Wittrockiella paradoxa, Yaquina Bay}, doi = {10.1515/BOT.2010.040}, author = {Boedeker, Christian and Hansen, Gayle I.} } @article {34321, title = {Recommended NWI Revisions and GIS Layer Development for Tidal Wetlands of the Yaquina and Alsea River Estuaries}, year = {2010}, note = {"Prepared for U.S. Geological Survey, Western Fisheries Research Center" Summarizes work done to generate a GIS dataset on tidal wetlands in the Yaquina and Alsea estuaries, updates a 1999 report prioritizing sites for conservation in the two estuaries, and recommends revisions to the National Wetlands Inventory of wetlands in the study area.}, month = {2010, Jul.}, pages = {14 p.}, institution = {Green Point Consulting}, address = {Corvallis, Or.}, keywords = {Alsea Bay, Alsea River, aquatic vegetation, Bayview Oxbow, Boone Slough, Depot Slough, Drift Creek, Eckman Lake, geographic information system, habitat restoration, Lint Slough, McCaffery Slough, Nute Slough, Olalla Slough, Poole Slough, salt marsh, Starr Creek, terrestrial vegetation, wetlands, Yaquina Bay}, url = {https://ir.library.oregonstate.edu/concern/defaults/n870zx01m}, author = {Brophy, Laura S. and Green Point Consulting,} } @article {34286, title = {Classification of Regional Patterns of Environmental Drivers and Benthic Habitats in Pacific Northwest Estuaries}, volume = {EPA 600/R-09/140}, year = {2009}, note = {"This report describes a pilot effort at classifying PNW estuaries with regards to landscape attributes and their susceptibility to nutrient enrichment." Much data is presented. Although the report focuses on seven estuaries (Alsea, Coos Bay, Nestucca, Salmon River, Tillamook Bay, Umpqua and Yaquina), many other estuaries are mentioned, and basic statistical data is given for all PNW estuaries.}, keywords = {Alsea Bay, climate, Coos Bay, demographics, eelgrass = Zostera marina, Ghost shrimp = Neotrypaea californiensis (Callianassa californiensis), hydrography, hydrology, Japanese eelgrass = Zostera japonica, Mud shrimp = Upogebia pugettensis, Nestucca River estuary, nitrate-nitrite, nitrogen, phosphorus, phytoplankton, precipitation, salinity, Salmon River Estuary, sediment data, tidal currents, Tillamook Bay, turbidity, Umpqua River estuary, Yaquina Bay}, url = {https://tinyurl.com/3rd376k}, author = {National Health and Environmental Effects Research Laboratory (U.S.). Western Ecology Division,}, editor = {Lee II, Henry and Brown, Cheryl A.} } @article {34266, title = {Coupling between the coastal ocean and Yaquina Bay, Oregon: importance of oceanic inputs relative to other nitrogen sources}, journal = {Estuaries and Coasts}, volume = {32}, number = {2}, year = {2009}, note = {Shows that the ocean (through seasonal upwelling) is the dominant source of nitrogen in Yaquina Bay during the dry (May-October) season, while the river is the dominant source of nitrogen for the rest of the year. Modeled nitrates, phosphates and chlorophyll a in the bay.}, pages = {219-237}, keywords = {nitrate-nitrite, nutrient cycles, phosphate, Yaquina Bay, Yaquina River}, doi = {10.1007/s12237-008-9128-6}, author = {Brown, Cheryl A. and Ozretich, Robert J.} } @article {34261, title = {Effectiveness Monitoring at Tidal Wetland Restoration and Reference Sites in the Siuslaw River Estuary: a Tidal Swamp Focus}, year = {2009}, note = {Two wetland restoration sites in the Siuslaw Estuary were monitored and compared with two reference sites in the Siuslaw Estuary, and with one reference site in the Yaquina Estuary. While documenting conditions, comparing restoration sites to reference sites, establishing a baseline to note future change, and providing data on tidal swamps, the project also developed data to guide future tidal restoration projects. The study found that both restoration sites are subject to "natural processes and controlling factors""and tidal wetland restoration is well underway."}, pages = {125 p.}, institution = {Green Point Consulting}, address = {Corvallis, Or.}, keywords = {aquatic vegetation, Cox Island, diking, habitat, hydrology, North Fork Siuslaw River, salt marsh, sediment data, Siuslaw River, soils, species list, terrestrial vegetation, tidal data, wetland delineation, wetland restoration, wetland vegetation, Yaquina River}, url = {https://ir.library.oregonstate.edu/concern/defaults/1v53k2397}, author = {Brophy, Laura S. and Green Point Consulting,} } @article {34256, title = {Recolonization of intertidal Zostera marina L. (eelgrass) following experimental shoot removal}, journal = {Journal of Experimental Marine Biology and Ecology }, volume = {374}, number = {1}, year = {2009}, note = {This paper studies the time it takes for eelgrass meadows to recover from disturbances, in particular the difference between continuous lower intertidal meadows as opposed to higher intertidal patches of eelgrass. Areas of eelgrass in Yaquina Bay were denuded and the time of recovery was studied. The lower continous meadows recovered within 24 months, but recovery for the patchy higher intertidal eelgrass plots was much slower. Map, charts, aerial photographs. Summarizes current state of eelgrass beds in the Yaquina estuary.}, pages = {p.69-77}, keywords = {aquatic vegetation, eelgrass=Zostera marina, habitat restoration}, doi = {10.1016/j.jembe.2009.04.011}, author = {Boese, Bruce L. and Kaldy, James E. and Patrick J Clinton and Eldridge, Peter M. and Folger, Christina L.} } @inbook {34206, title = {Archaeology illuminated by history, history illuminated by archaeology: examples from the Oregon Coast.}, booktitle = {Dunes, Headlands, Estuaries, and Rivers: Current Archaeological Research on the Oregon Coast}, series = {Association of Oregon Archaeologists Occasional Paper}, volume = {no.8}, year = {2008}, note = {Explores the Half Moon Weir site near the mouth of the North Fork of the Siuslaw River, along with sites at Yaquina Falls and Spencer Creek in Lincoln County and Whaleshead Cove in Curry County.}, pages = {p.95-105}, publisher = {Association of Oregon Archaeologists}, organization = {Association of Oregon Archaeologists}, address = {Eugene, Or.}, keywords = {archeology, indigenous peoples, Upper Yaquina River, weirs}, author = {Connolly, Thomas J. and Byram, Robert Scott and Kentta, Robert} } @article {26636, title = {The Coastal Connection: Assessing Oregon Estuaries for Conservation Planning}, year = {2008}, note = {A good overview of the concepts used for evaluating the health of estuaries in Oregon. Identifies data sources, standards. Good bibliography.}, month = {2008. Apr.}, pages = {48 p.}, institution = {The Nature Conservancy in Oregon}, address = {Portland, Or.}, keywords = {Alsea Bay, Beaver Creek, Chetco River, coastal hazards, Coos Bay, Coquille River, Depoe Bay, eelgrass = Zostera marina, erosion, general ecosystem description, habitats, hydrology, introduced species, landslides, marshes, Necanicum River, Nehalem River, Nestucca Bay, Netarts Bay, Rogue River, salinity, Salmon River Estuary, Sand Lake, sediments, Siletz Bay, Siltcoos Creek, Siuslaw River, Sixes River, Tahkenitch Creek, Tenmile Creek, Tillamook Bay, water quality, Yachats River, Yaquina Bay}, url = {https://www.dfw.state.or.us/conservationstrategy/docs/conservation_planning_1110/TNC_report.pdf}, author = {Aldous, Allison and Brown, Jenny and Elseroad, Adrien and The Nature Conservancy in Oregon} } @article {49776, title = {Colonial power and indigenous justice: fur trade violence and its aftermath in Yaquina narrative}, journal = {Oregon Historical Quarterly}, volume = {109}, year = {2008}, note = {Why were there so few Native Americans in Yaquina Bay when white settlers arrived? One possible answer is that many of them were murdered in 1832 by staff of the Hudson{\textquoteright}s Bay Company. The attack was in retaliation for the killing by Alsea Indians of two Hudson{\textquoteright}s Bay trappers. Many inhabitants of a large village near Oysterville were killed. {\textquotedblleft}Diminished as a nation and displaced from their homelands, Yaquina survivors memorialized their losses in oral narrative that reveals the depth of impacts throughout the colonization process, and the injustice of colonial power relations.{\textquotedblright} (p.382)}, month = {2008, Fall}, pages = {p. 357-387}, keywords = {Alsea Bay, Alsea Indians, Beaver Creek, Coastal Indian Reservation, historical, Hudson{\textquoteright}s Bay Company, Native Americans, Oysterville, Siletz Indian Reservation, Yaquina (Or.), Yaquina Bay, Yaquina Indians}, url = {https://works.bepress.com/byram/1/}, author = {Byram, Robert Scott} } @article {82476, title = {An Ecological Economics Approach to Understanding Oregon{\textquoteright}s Coastal Economy and Environment}, year = {2008}, note = {{\textquotedblleft}There have been no studies to date that address the broad economic relationship between Oregon{\textquoteright}s estuary and marine ecosystems and the economic health of Oregon{\textquoteright}s coastal communities. This paper reports on the first phase of an economic analysis linking marine and marine influenced ecological conditions to the general coastal economy by exploring those ecosystem services that connect economy and ecology{\textquotedblright} (p.1). Good county statistics. A nice summary of aspects of coastal ecology and economics that might be overlooked.}, pages = {83 p.}, institution = {Audubon Society of Portland}, address = {Portland, Or.}, url = {https://coastrange.org/wp-content/uploads/2019/10/Swedeen-2008-Coastal-Report-compressed.pdf}, author = {Swedeen, Paula and Batker, Dave and Radtke, Hans and Boumans, Roelof and Willer, Chuck} } @article {34196, title = {Effects of erosion and macroalgae on intertidal eelgrass (Zostera marina) in a northeastern Pacifid estuary (USA)}, journal = {Botanica Marina}, volume = {51}, number = {4}, year = {2008}, note = {This study is concerned with the natural factors that limit the distribution and growth of inter-tidal eelgrass. The authors suggest that dessication from exposure to the air, along with macroalgae and erosion all limit eelgrass, "and that these factors operate in an acute rather than a chronic manner." (from the Abstract)}, pages = {p.247-257}, keywords = {algae, Coquille Point, eelgrass = Zostera marina, erosion, Hatfield Marine Science Center, Idaho Flats, Oneatta Point, sediments, Ulva species, Yaquina Bay}, doi = {10.1515/BOT.2008.034}, author = {Boese, Bruce L. and Robbins, Bradley D.} } @article {34226, title = {Genetic structure, migration, and patterns of allelic richness among coho salmon (Oncorhynchus kisutch) populations of the Oregon coast}, journal = {Canadian Journal of Fisheries and Aquatic Sciences}, volume = {65}, number = {7}, year = {2008}, note = {Studied genotypic data from eight microsatellite loci to characterize Oregon coastal coho salmon. "The Coos, Umpqua, Smith and Coquille rivers appear to form a southern group, whereas the Nehalem, Tillamook, Wilson, Necanicum, Nestucca, Trask, and Salmon rivers form a loosely defined northern group." (p.1278) Major sources of migrating (straying) coho are the Coos River in the south and the Nehalem River in the north. "Consequently, populations of the central coast ... receive relatively balanced immigrant contributions from the major source populations." (p.1280) This gives central coast populations such as the Yaquina River higher levels of allelic richness.}, month = {07/2008}, pages = {p.1274-1285}, keywords = {Coho salmon = Oncorhynchus kisutch, genetics, geographic distribution, population biology}, doi = {10.1139/F08-044}, author = {Johnson, Marc A. and Banks, Michael A.} } @book {34131, title = {An Approach to Developing Nutrient Criteria for Pacific Northwest Estuaries : a Case Study of Yaquina Estuary, Oregon}, volume = {EPA 600/R-07/046}, year = {2007}, note = {Color illustrations, maps. "June 2007.""EPA 600/R-07/046." Good summary of physical and biotic characteristics of the estuary, as well as the history of land use.}, pages = {xiii, 169 p.}, publisher = {U.S. Environmental Protection Agency, Office of Research and Development}, organization = {U.S. Environmental Protection Agency, Office of Research and Development}, chapter = {xiii, 169 p.}, address = {Washington, DC}, keywords = {nutrient cycles, water pollution, water quality, Yaquina Bay}, url = {https://www.biodiversitylibrary.org/bibliography/149777$\#$/summary}, author = {Brown, Cheryl A. and National Health and Environmental Effects Research Laboratory (U.S.). Western Ecology Division.,} } @article {83220, title = {Contaminant exposure in outmigrant juvenile salmon from Pacific Northwest estuaries of the United States}, journal = {Environmental Monitoring and Assessment}, volume = {124}, number = {1-3}, year = {2007}, note = {When juvenile salmonids migrate downstream towards the ocean, they can encounter and absorb harmful chemicals such as DDT, polychlorinated biphenyls (PCBs), polycyclic aromatic hydrocarbons (PAHs) and pesticides. The authors of this paper measured harmful chemicals in tissues of juvenile salmonids, and in their prey. They also measured stomach contents of salmon from estuaries and hatcheries. Results were not surprising: industrial estuaries such as the Columbia River, Coos Bay and Yaquina Bay showed high contaminant exporsure (Yaquina Bay was high in PCBs in Chinook salmon), while natural estuaries like the Salmon and Elk River estuaries, had low exposures to harmful chemicals. Some of the conservation estuaries, including Alsea Bay, had relatively high exposures to contaminants. . Juvenile Chinook were more vulnerable than coho salmon.}, pages = {p.167-194}, keywords = {Alsea Bay, Chinook salmon = Oncorhynchus tshawytscha, Coho salmon = Oncorhynchus kisutch, Columbia River, Coos Bay, Coquille River estuary, DDT, Elk River, juvenile fish, migration, pesticides, Salmon River, Salmon River Hatchery, Tillamook Bay, water pollution, Yaquina Bay}, doi = {https://doi.org/10.1007/s10661-006-9216-7 }, author = {Johnson, Lyndal L. and Ylitalo, Gina M. and Arkoosh, Mary R. and Kagley, Anna N. and Stafford, Coral and Bolton, Jennie L. and Buzitis, Jon and Anulacion, Bernadita F. and Collier, Tracy K.} } @article {34126, title = {An examination of the spatial and temporal generality of the influence of ecosystem engineers on the composition of associated assemblages}, journal = {Aquatic Ecology}, volume = {41}, number = {1}, year = {2007}, note = {Examined the manner and mechanisms by which ghost shrimp and eelgrass influenced associated benthic assemblages. Compared temperate estuaries in New Zealand and the U.S. Studied Otago Harbour, Blueskin Bay and Papanui Inlet in New Zealand and Tillamook Bay, Yaquina Bay and Netarts Bay in Oregon. Transplanted shrimp into low- and high-density plots of eelgrass and eelgrass into low- and high-density plots of ghost shrimp. Noted which associated benthic species were sensitive to the differences in density. Also noted seasonal factors: seagrass has a competitive advantage in spring, while ghost shrimp are most active and have a greater advantage in summer. "Most discriminating taxa generally showed a strong prevalence for treatment sites that contained seagrass, implying that seagrass is the dominant ecosystem engineer in the systems studied."}, pages = {p.129-147}, keywords = {bioturbation, ecosystem modeling, Ghost shrimp = Neotrypaea californiensis (Callianassa californiensis), Japanese eelgrass = Zostera japonica, Netarts Bay, Tillamook Bay, Yaquina Bay}, doi = {10.1007/s10452-006-9053-3}, author = {Berry, Richard L. and Rowden, Ashley A.} } @article {34136, title = {Hemoflagellates of Oregon marine fishes with the description of new species of Trypanosoma and Trypanoplasma}, journal = {Journal of Parasitology}, volume = {93}, number = {6}, year = {2007}, note = {Parasites from fish "collected in the vicinity of Newport, Oregon."}, month = {Dec_2007}, pages = {1442-1451}, keywords = {parasites}, isbn = {0022-3395}, doi = {10.1645/GE-1220.1}, author = {Burreson, Eugene M.} } @book {34161, title = {Identification of historical populations of Coho salmon (Oncorhynchus kisutch) in the Oregon coast evolutionarily significant unit}, series = {NOAA Technical Memorandum NMFS-NWFSC}, volume = {no.79}, year = {2007}, note = {Important report on coho stocks and their genetic relationships.}, month = {2007, Jan.}, pages = {129 p.}, publisher = {U.S. Dept. of Commerce, National Oceanic and Atmospheric Administration, National Marine Fisheries Service}, organization = {U.S. Dept. of Commerce, National Oceanic and Atmospheric Administration, National Marine Fisheries Service}, address = {[Seattle, Wash.]}, keywords = {abundance, Alsea Basin, aquatic vegetation, Beaver Creek, biological, Coho salmon = Oncorhynchus kitsutch, commercial fisheries - salmon, Coos Bay, Coquille River, depleted populations, Devil{\textquoteright}s Lake, general ecosystem description, human impacts, hydrology, natural resource management, Necanicum Bay, Nehalem Bay, Nestucca River estuary, Netarts Bay, recreational fisheries - salmon, Salmon River, Sand Lake, Siletz River, Siltcoos Creek, Siuslaw River, Sixes River, Tahkenitch Creek, Tenmile Creek, terrestrial vegetation, Tillamook Bay, Umpqua River Basin, Yaquina River Basin}, url = {https://www.arlis.org/docs/vol1/123357711.pdf}, author = {Lawson, Peter W. and Bjorkstedt, Eric P. and Chilcote, Mark W. and Huntingdon, Charles W. and Mills, Justin S. and Moore, Kelly M. S. and Nickelson, Thomas E. and Reeves, Gordon H. and Stout, Heather A. and Wainwright, Thomas C. and Weitkamp, Laurie A.} } @article {83250, title = {Limiting Factors Assessment and Restoration Plan: Buttermilk, Spilde, and Yaquina Headwaters, Sixth Fields Tributaries to the Yaquina Basin}, year = {2007}, note = {{\textquotedblleft}This document provides watershed restoration actions proposed to enhance the coho salmon population within the Buttermilk, Spilde and Yaquina Headwaters Sixth Field basins in Lincoln County, Oregon. . . The goal of the restoration effort has been to identify the dominant processes and habitat characteristics that currently limit the production of coho salmon smolts in the subbasins, and to develop a prioritized list of actions ({\textquoteleft}prescriptions{\textquoteright}) for removing the limitations in ways that normalize landscape and stream channel function{\textquotedblright} (from the Introduction).}, month = {2007, Sep.}, pages = {130 p.}, institution = {Mid-Coast Watersheds Council}, address = {Newport, Or.}, keywords = {agriculture, American beaver = Castor canadensis, Bryant Creek, Buttermilk Creek, Coho salmon = Oncorhynchus kisutch, cutthroat trout = Oncorhynchus clarki, dissolved oxygen, Felton Creek, fish passage, habitat restoration, habitats, human impacts, Humphry Creek, hydrology, Little Yaquina River, marshes, Randall Creek, Spilde Creek, Stony Creek, water quality, water temperature, Yaquina River, Young Creek}, url = {https://tinyurl.com/bdum9rme }, author = {Bio-Surveys LLC, and Holbert, Mary and Sialis Company,,} } @article {34111, title = {The Collaborative Study of Juvenile Rockfish, Cabezon, and Kelp Greenling Habitat Associations between Morro Bay, California and Newport, Oregon: Final report to: Pacific States Marine Fisheries Commission Summarizing Data for 2003, 2004 and 2005}, year = {2006}, note = {"California Sea Grant and Pacific Marine Conservation Council Cooperative Research Project." Various juvenile rockfish, kelp greenling and cabezon were trapped both offshore and in various bays and ports in Oregon and California. Port Orford, Coos Bay and Newport were the Oregon sites. Trapping took place between June, 2003 and December, 2005. The goal was to identify the habitat associated with each species. The most abundant trapped juvenile species in Yaquina Bay was the black rockfish (181), followed by kelp greenling (69), copper rockfish (58) and cabezon (27). Yaquina Bay rockfish and cabezon preferred pilings and mud sites in deeper water in channels near eelgrass. Yaquina Bay kelp greenling preferred mud and sand sites, with over 90\% found near piling. }, pages = {13 p.}, keywords = {Black rockfish = Sebastes melanops, cabezon = Scorpaenichthys marmoratus, Coos Bay, Copper rockfish = Sebastes caurinus, geographic distribution, habitats, juvenile fish, kelp greenling=Hexagrammos decagrammus, Rockfish = Sebastes spp., Yaquina Bay}, url = {https://escholarship.org/uc/item/35m8147x}, author = {Schlosser, Susan and Bloeser, Jennifer} } @article {82977, title = {Estuarine Habitat Mitigation in Oregon: Policy Review, Analysis, and Recommended Improvements}, volume = {no.5}, year = {2006}, note = {This work is a Master{\textquoteright}s Degree graduate project written for the Oregon Department of State Lands. In this excellent overview of Oregon{\textquoteright}s estuarine mitigation policy, the author summarizes the current state of knowledge about estuarine ecology and the process of estuarine mitigation or restoration; describes Oregon{\textquoteright}s current (2006) policy; lists recently permitted projects and their related estuarine resource replacements; discusses assessment tools and mitigation options; examines compensatory mitigation in the watershed setting; and concludes with recommendations.}, pages = {200 p.}, institution = {Portland State University. Dept. of Environmental Science and Management}, address = {Portland, Or.}, keywords = {environmental law and policy, estuarine dynamics, general, habitat conservation, habitat restoration, human impacts, marsh restoration, wetland mitigation, wetland restoration,}, doi = {https://doi.org/10.15760/mem.33}, url = {https://pdxscholar.library.pdx.edu/mem_gradprojects/5/}, author = {Buckley, Anna} } @article {33981, title = {Dessication is a limiting factor for ellgrass (Zostera marina L.) distribution in the intertidal zone of a northeastern Pacific (USA) estuary.}, journal = {Botanica Marina.}, volume = {48}, year = {2005}, month = {2005}, pages = {274-283}, keywords = {biological, eelgrass = Zostera marina, growth, Idaho Flats, Idaho Point, King Slough, life history information, The Bend, Yaquina Bay, Yaquina City}, isbn = {0006-8055, 1437-4323 (Online)}, doi = {10.1515/BOT.2005.037}, author = {Boese, Bruce L. and Robbins, Bradley D. and Thursby, G. B.} } @article {34061, title = {Oregon Coastal Coho Assessment: Part 1: Synthesis of the Coastal Coho ESU Assessment }, year = {2005}, note = {"May 6, 2005" -- date from front cover. This report is important because it identifies winter habitat for coho ("stream complexity") as the most important limiting factor for the Oregon Coast Evolutionary Significant Unit coho recovery and production. Other limiting factors include hatchery impacts, water quantity, water quality, and exotic fish species. Identifies viable populations. Distinguishes between populations that can persist when marine and freshwater conditions are unfavorable and populations dependent on reproductive contributions from strays from other basins. Preliminary analysis "suggests that winter habitat (i.e. stream complexity) is a higher priority for restoring coho populations across the ESU than water quality." (p.20) Full title: Oregon coastal coho assessment: Part 1: Synthesis of the coastal coho ESU assessment -- including: 1. Viability analysis; 2. Population bottlenecks; 3. Evaluation of conservation efforts; 4. Monitoring; 5. Current threats to ESU viability; 6. Adaptive management commitments.}, pages = {69 p.}, keywords = {Alsea River, Beaver Creek, Coho salmon = Oncorhynchus kisutch, Coos Bay, Coquille Bay, ecosystem health, ecosystem modeling, Floras Lake, habitat restoration, hatcheries, hatchery salmonids, historical, human impacts, introduced species, Lower Umpqua River, Middle Umpqua River, Necanicum River, Nehalem River, Nestucca River, North Umpqua River, reproductive behavior, Salmon River, Siletz River, Siltcoos Lake, Siuslaw River, Sixes River, South Umpqua River, straying, Tahkenitch Lake, Tenmile Creek, Tillamook Bay, water quality, wild salmonids, Yaquina River}, url = { https://www.dfw.state.or.us/fish/crp/docs/coastal_coho/reference/SynthesisFinalReport.pdf }, author = {Nicholas, Jay and McIntosh, Bruce and Bowles, Ed and Oregon. Watershed Enhancement Board and Oregon. Dept. of Fish and Wildlife,} } @article {33951, title = {Temporal changes in the prevalence of parasites in two Oregon estuary-dwelling fishes}, journal = {Journal of Parasitology}, volume = {90}, number = {3}, year = {2004}, month = {2004}, pages = {564-571}, keywords = {biological, English sole=Pleuronectes vetulus, fish disease, Lower Yaquina River, Pacific staghorn sculpin=Leptocottus armatus, parasites, River Mile 8, Sally{\textquoteright}s Slough, Upper Yaquina River}, isbn = {0022-3395, 022-3395}, doi = {10.1645/GE-3057}, author = {Olson, Robert E. and Pierce, Jack R. and Jacobson, Kym C. and Burreson, Eugene M.} } @proceedings {51451, title = {Case study -- performance investigation of a sunken concrete ship cargo handling wharf at the Port ofNewport, Oregon}, year = {2003}, note = {Gives the history of the Port Dock in Newport, and describes the engineering challenges facing the Port of Newport as the sunken ship Pasley shifted and undermined the dock. Includes schematic drawings and bw photographs, including a photo of the Pasley before it was sunk. }, pages = {p.1250-1261}, publisher = {American Society of Civil Engineers,}, address = {Portland, Or.}, keywords = {engineering, harbors, industrial development, Newport (Or.), Port of Newport, ports, sediments, Yaquina Bay}, author = {Byington, Marvin L. and Martin, Keith S. and Driscoll, David D. and Wurst, Philip L.}, editor = {Jeffrey A Melby} } @article {33856, title = {Challenges and strategies for better use of scientific information in the management of coastal estuaries}, journal = {Estuaries}, volume = {26}, number = {4B}, year = {2003}, note = {From the PNCERS Study, a seven-year program that focused on four estuaries in Washington and Oregon: Gray{\textquoteright}s Harbor, Willapa Bay, Yaquina Bay and Coos Bay. This article also considers Tillamook Bay. Examines environmental indicators, environmental threats, and information management.}, pages = {1189-1204}, doi = {10.1007/BF02803373}, author = {Leschine, Thomas M. and Ferriss, Bridget E. and Bell, Kathleen P. and Bartz, Krista K. and MacWilliams, Sarah and Pico, Michelle and Bennett, Andrew K.} } @article {33801, title = {Dessiccation index: a measure of damage caused by adverse aerialexposure on intertidal eelgrass (Zostera marina) in an Oregon (USA) estuary}, journal = {Aquatic Botany}, volume = {76}, number = {4}, year = {2003}, month = {Aug_2003}, pages = {329-337}, keywords = {aquatic vegetation, biological, eelgrass = Zostera marina, Idaho Flats, Yaquina Bay}, doi = {10.1016/S0304-3770(03)00068-8}, author = {Boese, Bruce L. and Alayan, Kathryn E. and Gooch, Elizabeth F. and Robbins, Bradley D.} } @article {33811, title = {Effects of inbreeding on performance traits in Pacific oysters (Crassostrea gigas)}, journal = {Journal of Shellfish Research}, volume = {22}, number = {1}, year = {2003}, note = {Abstract only}, month = {2003}, pages = {329}, keywords = {aquaculture, biological, genetics, life history information, Oregon State University Hatfield Marine Science Center, Pacific oyster=Crassostrea gigas}, isbn = {0730-8000}, author = {Evans, F. and Matson, S. and Brake, J. and Langdon, Christopher J.} } @mastersthesis {40801, title = {Evaluating Oregon{\textquoteright}s Beach Sites and Assessing Twenty-Six Coastal Beach Areas for Recreational Water Quality Standards}, year = {2003}, note = { 26 Oregon beaches were monitored for E. coli and Enterococci bacteria. This thesis discusses the monitoring results. Proximity to sewage treatment plant outfalls was frequently related to bacterial contamination. {\textquotedblleft}Within a five mile radius, seven of the nine (78\%) Oregon beach sites with bacterial water quality exceedances have a STP [sewage treatment plant] effluent pipe. Cannon Beach, Siletz Bay, and D-River have one STP within a five mile radius. Two STPs are located within five miles of Harris, Rockaway, Nelscott, and Otter Rock at South Cove. The Cannon Beach STP releases wastewater into Ecola Creek, so it was not a surprise that a sample at the mouth of this creek exceeded both bacterial standards.{\textquotedblright} Major professor was Catherine M. Neumann.}, pages = {99 p.}, school = {Oregon State University}, type = {Masters Thesis}, edition = {M.S.}, chapter = {Dept. of Public Health, Environmental Health Management}, address = {Corvallis, Or.}, keywords = {Agate Beach, bacteria, Beaver Creek, D River, environmental monitoring, Lincoln City (Or.), Moolach Shores, Nelscott Beach, Nye Beach, Ona Beach, Otter Rock, Road{\textquoteright}s End Beach, Siletz Bay, South Beach, theses, Umpqua Lighthouse, water pollution}, url = {https://ir.library.oregonstate.edu/concern/graduate_thesis_or_dissertations/5x21tj71s}, author = {Benedict, Rae T.} } @article {33846, title = {Family-based selection improves yields of Pacific oysters, Crassostrea gigas}, journal = {Journal of Shellfish Research}, volume = {22}, number = {1}, year = {2003}, note = {Abstract only}, month = {2003}, pages = {339-340}, keywords = {aquaculture, biological, genetics, molluscs, Oregon State University Hatfield Marine Science Center, Pacific oyster=Crassostrea gigas}, isbn = {0730-8000}, author = {Langdon, Christopher J. and Matson, S. and Brake, J. and Evans, F.} } @article {33831, title = {Interactions between human communities and estuaries in the Pacific Northwest: trends and implications for management}, journal = {Estuaries}, volume = {26}, number = {4B}, year = {2003}, note = {From the PNCERS Study, a seven-year program that focused on four estuaries in Washington and Oregon: Gray{\textquoteright}s Harbor, Willapa Bay, Yaquina Bay and Coos Bay. In addition to these four estuaries, this paper addresses Tillamook Bay and Tillamook County residents.}, pages = {994-1009}, keywords = {demographics, economics, environmental values, perceived threats to estuaries}, doi = {10.1007/BF02803359}, author = {Huppert, Daniel D. and Johnson, Rebecca L. and Leahy, Jessica and Bell, Kathleen} } @article {33796, title = {Limiting Factors Assessment and Restoration Plan: Olalla Creek, Tributary of the Yaquina Estuary}, year = {2003}, note = {"Submitted to Midcoast Watersheds Council.""July 20, 2003"}, pages = {16 p.}, keywords = {agriculture, Coho salmon = Oncorhynchus kisutch, cutthroat trout = Oncorhynchus clarki, dams, dissolved oxygen, East Olalla Creek, habitat restoration, habitats, human impacts, hydrography, hydrology, marshes, Olalla Creek, Olalla Slough, reservoirs, water quality, water temperature, West Fork Olalla Creek, wetland delineation, Yaquina River}, url = {https://static1.squarespace.com/static/5626fb1ee4b07be93cf930c1/t/5653c552e4b0072b5f3c07a6/1448330578186/Olalla+Creek.pdf}, author = {Bio-Surveys LLC, and Sialis Company} } @article {33821, title = {Oceanography of the U.S. Pacific Northwest coastal ocean and estuaries with application to coastal ecology}, journal = {Estuaries}, volume = {26}, number = {4B}, year = {2003}, note = {From the PNCERS Study, a seven-year program that focused on four estuaries in Washington and Oregon: Gray{\textquoteright}s Harbor, Willapa Bay, Yaquina Bay and Coos Bay.}, pages = {1010-1031}, doi = {10.1007/BF02803360}, author = {Hickey, Barbara M. and Banas, Neil S.} } @article {33806, title = {Relative importance of survival and growth rate in determining yields of Pacific oysters, Crassostrea gigas}, journal = {Journal of Shellfish Research}, volume = {22}, number = {2}, year = {2003}, note = {Abstract only}, month = {2003}, pages = {602}, keywords = {aquaculture, biological, genetics, Oregon State University Hatfield Marine Science Center, Pacific oyster=Crassostrea gigas, Yaquina Bay}, author = {Evans, F. and Matson, S. and Brake, J. and Langdon, Christopher J.} } @article {33841, title = {Yields of cultured Pacific oysters Crassostrea gigas Thunberg improved after one generation of selection}, journal = {Aquaculture}, volume = {220}, number = {1/4}, year = {2003}, month = {2003}, pages = {227-244}, keywords = {aquaculture, biological, genetics, Oregon State University Hatfield Marine Science Center, Pacific oyster=Crassostrea gigas}, isbn = {0044-8486}, doi = {10.1016/S0044-8486(02)00621-X}, author = {Langdon, Christopher J. and Evans, F. and Jacobson, D. and Blouin, M.} } @article {33731, title = {Audubon Important Bird Areas Program in Oregon: Site Nomination Form [Yaquina Bay]}, year = {2002}, note = {December, 2002. Good maps.}, month = {December_2002}, keywords = {aquatic vegetation, bald eagle=Haliaeetus leucocephalus, biological, birds, black brant=Branta bernicla nigricans, brown pelican=Pelecanus occidentalis, caspian tern=Sterna caspia, depleted populations, general ecosystem description, geographical distribution, green crab=Carcinus maenas, habitat conservation, harlequin duck=Histrionicus histrionicus, Heermann{\textquoteright}s gull=Larus heermanni, historical, human impacts, introduced species, land ownership, land use, Lower Yaquina River, mew gull=Larus canus, molluscs, natural resource management, peregrine falcon=Falco peregrinus, pesticides, physical modifications, purple martin=Progne subis, sanderling=Calidris alba, sediments, temporal distribution, tourism, toxicity, water pollution, western grebe=Aechmophorus occidentalis, western gull=Larus occidentalis, whimbrel=Numenius phaeopus, Yaquina Bay, Yaquina Head, Yaquina River Basin}, author = {Bayer, Range D.} } @mastersthesis {33736, title = {Brush Fences and Basket Traps: the Archaeology and Ethnohistory of Tidewater Weir Fishing on the Oregon Coast}, volume = { }, year = {2002}, note = {Focuses on Coquille River and Yaquina Bay sites. Chapter 6 covers the Ahnkuti site on Yaquina Bay, where there are the remains of a large and elaborate weir. Ahnkuti was actively used from about 100 B.C.E. to the 19th century, making it one of the longest human-occupied sites on the Oregon Coast.}, pages = {359 p.}, school = {University of Oregon}, type = {Doctoral Dissertation}, edition = {Ph. D.}, chapter = {Dept. of Anthropology}, address = {Eugene, Or.}, keywords = {archeology, indigenous peoples, theses, weirs}, url = {https://works.bepress.com/cgi/viewcontent.cgi?article=1004\&context=byram}, author = {Byram, Robert Scott} } @article {34586, title = {Effects of recreational clam harvesting on eelgrass (Zostera marina) and associated infaunal invertebrates: in situ manipulative experiments}, journal = {Aquatic Botany}, volume = {73}, number = {1}, year = {2002}, note = {"The effect of recreational clam harvesting on eelgrass (Zostera marina L.) was experimentally tested by raking or digging for clams in experimental 1m2 plots located in a Yaquina Bay (Newport, OR) eelgrass meadow{\textellipsis} Approximately 10\% of the eelgrass of Yaquina Bay is subjected to recreational clamming and as this activity is generally less intense than that employed in this study, it is unlikely that recreational clamming has a major impact on eelgrass beds in the Yaquina estuary. This conclusion should be viewed with caution as multi-year disturbances were not investigated and there are differences in sediment characteristics and clam abundances between experimental sites and those sites that are intensively harvested by the public.{\textquotedblright} (from the Abstract)}, month = {2002, May}, pages = {p.63-74}, keywords = {aquatic invertebrates, bivalves, Butter clam = Saxidomus giganteus eelgrass = Zostera marina, clams, Cockle clam = Clinocardium nuttallii, environmental disturbance, Gaper clam = Tresus capax, molluscs, recreational fisheries {\textendash} shellfish, sediments, Yaquina Bay}, doi = {10.1016/S0304-3770(02)00004-9}, author = {Boese, Bruce L.} } @article {13776, title = {Recovery of wild salmonids in Western Oregon lowlands}, volume = {no.2002-1}, year = {2002}, note = {Focus on lower rivers and estuaries. Good summaries of states of streams. Appendix B gives stream miles that meet EPA 303(d) water quality standards.}, pages = {169 p.}, institution = {Independent Multidisciplinary Science Team,}, address = {Salem, Or.}, keywords = {estuaries, habitat restoration, human impacts, Oncorhynchus spp., salmon}, url = {https://ir.library.oregonstate.edu/concern/technical_reports/7d278t113}, author = {Independent Multidisciplinary Science Team, and Buckhouse, John and Elmore, Wayne and Gregory, Stanley and Kavanagh, Kathleen and Pearcy, William G. and Schreck, Carl B.} } @article {33766, title = {Survival and growth effects on yields of Pacific oysters, Crassostrea gigas}, journal = {Journal of Shellfish Research}, volume = {21}, number = {1}, year = {2002}, note = {Abstracts of Technical Papers, 55th Annual Meeting, National Shellfisheries Association \& Pacific Coast Oyster Growers Association, Silverdale, Washington, September 20-22, 2001}, month = {2002}, pages = {327}, keywords = {aquaculture, biological, developmental stages, genetics, growth, Marine Science Center Dock, Pacific oyster=Crassostrea gigas}, isbn = {0730-8000}, author = {Langdon, Christopher J. and Evans, F. and Brake, J. and Matson, S.} } @article {33761, title = {Yaquina Bay living: profile of a community in transition: a report on residents{\textquoteright} attitude about their environment}, volume = {no.02-09}, year = {2002}, institution = {Washington Sea Grant}, address = {Seattle, WA}, keywords = {demographics, general, human impacts, Yaquina Bay}, url = {https://repository.library.noaa.gov/view/noaa/44109}, author = {Johnson, Rebecca and Farley, Christopher and Bell, Kathleen and Huppert, Daniel and Washington Sea Grant, and Pacific Northwest Coastal Ecosystems Regional Study} } @article {25941, title = {Zooplankton invasions: a brief review, plus two case studies from the northeast Pacific Ocean}, journal = {Hydrobiologia}, volume = {480}, number = {1-3}, year = {2002}, note = {Traces the expansion of two species of Asian copepods on the West Coast. The species invading Oregon estuaries is Pseudodiaptomus inopinus.}, pages = {p.87-110}, keywords = {Coos Bay, Coquille River estuary, invasive species, Pseudodiaptomus inopinus, Siuslaw River estuary, Tillamook Bay, Umpqua River, Winchester Bay, Yaquina Bay, zooplankton}, doi = {10.1023/A:1021233018533}, author = {Bollens, Stephen M. and Cordell, Jeffery R. and Avent, Sean and Hoof, Rian} } @conference {33661, title = {Genetic-environment interaction effect on yields of Pacific oysters planted at subtidal and intertidal sites [abstract]}, booktitle = {Aquaculture 2001: Book of Abstracts}, volume = {754}, year = {2001}, note = {Alternate title: Aquaculture: a fantasy come true: book of abstracts. Meeting held Jan 21-25, 2001.}, pages = {p.349}, publisher = {World Aquaculture Society}, organization = {World Aquaculture Society}, address = {Lake Buena Vista, FL}, keywords = {aquaculture, biological, genetics, Idaho Flats, Pacific oyster=Crassostrea gigas}, author = {Langdon, Christopher J. and Jacobson, D. and Matson, S. and Evans, F. and Blouin, M.} } @inbook {76661, title = {Magnetic stratigraphy and tectonic rotation of the Oligocene Alsea, Yaquina, and Nye Formations, Lincoln County, Oregon}, booktitle = {Magnetic stratigraphy of the Pacific Coast Cenozoic : a symposium volume based on Proceedings of the 1997 Pacific Section AAPG-SEPM Meeting, Bakersfield, California, and the 2001 Pacific Section AAPG-SEPM-Cordilleran Section GSA Meeting}, series = {Book (SEPM (Society for Sedimentary Geology). Pacific Section) }, volume = {91}, year = {2001}, note = {{\textquotedblleft}The Alsea Formation, Yaquina Sandstone, and Nye Mudstone make up a sequence of almost 3300 m of Oligocene-Miocene marine strata. It is one of the thickest and most continuous records of the mid-Cenozoic in Oregon, yet dating of these rocks has been imprecise in the past.{\textquotedblright} (from the Abstract)}, pages = {p.184-194}, publisher = {Pacific Section SEPM}, organization = {Pacific Section SEPM}, address = {Fullerton, CA}, keywords = {Alsea Bay, Alsea Formation, geology, Magnetism, microfossils, Nye Mudstone, paleosciences, plankton, stratigraphy, Yaquina Bay, Yaquina Sandstone}, author = {Prothero, Donald R. and Bitboul, Clio Z. and Moore, George W. and Niem, Alan R. and American Association of Petroleum Geologists. Pacific Section, and Geological Society of America. Cordilleran Section,} } @article {33681, title = {Midcoast Sixth Field Watershed Assessment: Final Report}, year = {2001}, note = {Extensive maps.}, month = {2001}, institution = {Midcoast Watersheds Council}, address = {Newport, Or.}, keywords = {Alsea River estuary, biological, coho salmon=Oncorhynchus kisutch, habitat conservation, hydrology, land ownership, land use, landslides, map, physical, Salmon River Estuary, sediments, Siletz River estuary, steelhead=Oncorhynchus mykiss, water quality data, water temperature data, wetland delineation, Yachats River estuary, Yaquina Bay, Yaquina River, Yaquina River Basin}, url = {https://ir.library.oregonstate.edu/concern/defaults/fn107338m}, author = {Garono, Ralph and Brophy, Laura and Midcoast Watersheds Council} } @article {83287, title = {Socio-economic dynamics of Pacific Northwest estuaries}, year = {2001}, note = {In this chapter, we begin by describing the regional economies and human populations of the areas surrounding five Pacific Northwest estuaries: Grays Harbor and Willapa Bay in Washingon, and Coos Bay, Yquina Bay and Tillamook Bay in Oregon. Recognizing the nature of the local economies and the demographic characteristics of residents is fundamental to establishing the socio-economic baslein. In the second and third sections, we build on the baseline descriptions and focus on important findings from the Coastal Resident Survey and Coastal Visitor Survey.}, pages = {p.58-75}, institution = {Coastal Ocean Programs, NOAA}, keywords = {biological, demographics, economics, human impacts, Yaquina Bay}, url = {https://ir.library.oregonstate.edu/concern/defaults/4m90dw29q}, author = {Bell, Kathleen and Farley, Christopher and Huppert, Daniel and Johnson, Rebecca and Leschine, Thomas}, editor = {Parrish, J.K. and Litle, Kate} } @article {33706, title = {Wave runup, extreme water levels and the erosion of properties backing beaches}, journal = {Journal of Coastal Research}, volume = {17}, number = {2}, year = {2001}, note = {Water level and beach morphology and size are the major factors determining erosion of beachfront properties. "This paper reports on a model that has been developed to evaluate the susceptibility of coastal properties to erosion to waves..." (p.407)}, month = {2001, Spring}, pages = {p.407-419}, keywords = {Agate Beach, Beverly Beach, Cape Perpetua, coastal hazards, erosion, Gleneden Beach, Jump-Off Joe, Lost Creek State Park, Manzanita, Nestucca Spit, Nye Beach, Oceanside, South Beach, wave data, Yaquina Head}, author = {Ruggiero, Peter and Komar, Paul D. and McDougal, William G. and Marra, John J. and Beach, Reggie A.} } @mastersthesis {33526, title = {Feasibility of Supplementary Sampling of the Commercial Groundfish Landings in Oregon Using Seafood Plant Workers}, year = {2000}, note = {Major professor was David Sampson. }, month = {2000}, pages = {68 p.}, school = {Oregon State University}, type = {Masters Thesis}, edition = {M.S.}, chapter = {Dept. of Fisheries and Wildlife, Fisheries Science}, address = {Corvallis, Or.}, keywords = {biological, commercial fisheries - groundfish, Dover sole = Microstomus pacificus, Oregon State University Hatfield Marine Science Center, Port of Newport, sablefish = Anoplopoma fimbria, statistics, theses, yellowtail rockfish = Sebastes flavidus}, url = {https://ir.library.oregonstate.edu/concern/graduate_thesis_or_dissertations/hm50tv08s}, author = {Builder, Tonya L.} } @article {33701, title = {Indicators of west coast estuary health}, year = {2000}, note = {"In this chapter, we attempt to lay out a conceptual framework for indicator selection germane to the West Coast estuaries, including those studied extensively by PNCERS researchers. In the latter half of the chapter we offer an annotated list of candidate indicators for each of the three system components: the physical environment, the socio-economic system, and the the biological system. A concurrent table presents all candidate indicators, their constituent measures and proxies (if appropriate) and the relevant estuarine types within which the indicators are valuable." (Author excerpt)}, month = {2001}, pages = {p.1-20}, institution = {Coastal Ocean Programs, NOAA}, keywords = {biological, general ecosystem description, physical, Yaquina Bay}, url = {https://ir.library.oregonstate.edu/concern/defaults/x346d5217}, author = {Parrish, Julia K. and Bell, Kathleen and Logerwell, Elizabeth and Roegner, Curtis}, editor = {Parrish, J.K. and Litle, Kate} } @article {33576, title = {The molluscan broodstock program--improving Pacific oyster broodstock through genetic selection}, journal = {Journal of Shellfish Research}, volume = {19}, number = {1}, year = {2000}, note = {Abstract only}, month = {2000}, pages = {616}, keywords = {aquaculture, biological, genetics, molluscs, Oregon State University Hatfield Marine Science Center, Pacific oyster=Crassostrea gigas}, isbn = {0730-8000}, author = {Langdon, Christopher J. and Jacobson, D.P. and Evans, F. and Blouin, M.S.} } @article {33521, title = {Phototoxic evaluation of marine sediments collected from a PAH-contaminated site}, journal = {Archives of Environmental Contamination and Toxicology}, volume = {38}, number = {3}, year = {2000}, month = {April_2000}, pages = {274-282}, keywords = {amphipods, chemical, Leptocheirus plumulosus, Oregon State University Hatfield Marine Science Center, Rhepoxynius abronius, sediments, toxicity}, author = {Boese, Bruce L. and Ozretich, Robert J. and Lamberson, Janet O. and Cole, Faith A. and Swartz, Richard C. and Ferraro, Steven P.} } @article {33631, title = {Socio-economic dynamics of Pacific Northwest estuaries}, year = {2000}, note = {In this chapter, we begin by describing the regional economies and human populations of the areas surrounding five Pacific Northwest estuaries: Grays Harbor and Willapa Bay in Washingon, and Coos Bay, Yquina Bay and Tillamook Bay in Oregon. Recognizing the nature of the local economies and the demographic characteristics of residents is fundamental to establishing the socio-economic baslein. In the second and third sections, we build on the baseline descriptions and focus on important findings from the Coastal Resident Survey and Coastal Visitor Survey.}, month = {2001}, pages = {p.58-75}, institution = {Coastal Ocean Programs, NOAA}, keywords = {biological, demographics, economics, human impacts, Yaquina Bay}, url = {https://ir.library.oregonstate.edu/concern/defaults/4m90dw29q}, author = {Bell, Kathleen and Farley, Christopher and Huppert, Daniel and Johnson, Rebecca and Leschine, Thomas}, editor = {Parrish, J.K. and Litle, Kate} } @article {33476, title = {Avoidance response of the estuarine amphipod Eohaustorius estuariusto polycyclic aromatic hydrocarbon-contaminated field-collected sediments}, journal = {Environmental Toxicology and Chemistry}, volume = {18}, number = {6}, year = {1999}, month = {June_1999}, pages = {1232-1235}, keywords = {amphipods, chemical, Eohaustorius species, hydrocarbons, Idaho Flats, sediment data, sediments, toxicity}, author = {Kravitz, Michael J. and Lamberson, Janet O. and Ferraro, Steven P. and Swartz, Richard C. and Boese, Bruce L. and Specht, David T.} } @mastersthesis {33456, title = {Is the Laboratory Growth of Pacific Oyster Spat, Crassostrea gigas, Exposed to Varying Salinities, Predictive of Their Growth in the Estuary?}, year = {1999}, note = {Major professor was Christopher J. Langdon. }, month = {1999}, pages = {50 p.}, school = {Oregon State University}, type = {Masters Thesis}, edition = {M.S.}, chapter = {Dept. of Fisheries and Wildlife, Fisheries}, address = {Corvallis, Or.}, keywords = {biological, growth, Oregon State University Hatfield Marine Science Center, Pacific oyster = Crassostrea gigas, salinity, theses}, url = {https://ir.library.oregonstate.edu/concern/graduate_thesis_or_dissertations/3j333520z}, author = {Brooks, Christopher} } @book {36746, title = {Status review of coastal cutthroat trout from Washington, Oregon, and California}, series = {NOAA Technical Memorandum NMFS-NWFSC}, year = {1999}, note = {The Biological Review Team concluded that coastal stocks of cutthroat trout were not presently at risk of extinction. Appendix 1-A gives the known history of hatchery releases in streams and lakes.}, month = {1999}, publisher = {Northwest Fisheries Science Center}, organization = {Northwest Fisheries Science Center}, address = {[Seattle, Wash.]}, keywords = {Alsea Fish Hatchery, Alsea River, Chetco River, Coos Bay, Coos River, Coquille River, cutthroat trout = Oncorhynchus clarki, Devils Lake, endangered species, environmental policy and law, general ecosystem description, genetics, hatcheries, history, Kilchis River, life history information, Miami River, Millicoma River, natural resource management, Necanicum River, Nehalem River, Nestucca River, population biology, population count, Rogue River, Salmon River, salmonid species, Sand Creek, Siltcoos Lake, Siuslaw River, Smith River, statistics, Tahkenitch Lake, Tenmile Creek, Tillamook River, Trask River, Umpqua River, Wilson River, Yachats River, Yaquina River}, url = {https://repository.library.noaa.gov/view/noaa/3066}, author = {Johnson, Orlay W. and Ruckelshaus, Mary H. and Grant, W. Stewart and Waknitz, F. William and Garrett, Ann M. and Bryant, Gregory J. and Neely, Kathleen and Hard, Jeffrey J. and Northwest Fisheries Science Center (U.S.),} } @article {33451, title = {Toxicity and phototoxicity of mixtures of highly lipophilic PAH compounds in marine sediment: can the _PAH model be extrapolated?}, journal = {Archives of Environmental Contamination and Toxicology}, volume = {36}, year = {1999}, month = {1999}, pages = {270-280}, keywords = {Alsea River estuary, amphipods, aquatic invertebrates, biological, chemical, crustaceans, light, Rhepoxynius abronius, sediments, toxicity, water pollution, Yaquina Bay}, author = {Boese, Bruce L. and Ozretich, Robert J. and Lamberson, Janet O. and Swartz, Richard C. and Cole, Faith A. and Pelletier, Judith and Jones, Jill K.P.} } @booklet {33461, title = {Yaquina and Alsea River Basins Estuarine Wetland Site Prioritization Project: Final Report for MidCoast Watersheds Council}, year = {1999}, note = {This project, commissioned in 1998, is part of the MidCoast Watersheds Council{\textquoteright}s efforts to better understand the status and condition of the area{\textquoteright}s natural resources and to work with interested landowners to enhance and protect important areas.}, month = {1999}, pages = {50 p.}, publisher = {Green Point Consulting,}, address = {Corvallis, OR}, keywords = {Alsea River estuary, biological, Blind Slough, Boone Slough, Depot Slough, eelgrass=Zostera japonica, eelgrass=Zostera marina, Flesher Slough, general, grasses, Grassy Point, King Slough, McCaffery Slough, Mill Creek, Montgomery Creek, Olalla Slough, Parker Slough, Pooles Slough, Toledo Airport, Weiser Point, wetland delineation, wetland mitigation, wetland vegetation, Yaquina River Basin}, url = {https://ir.library.oregonstate.edu/concern/defaults/5x21tk796}, author = {Brophy, Laura and Oregon. Governor{\textquoteright}s Watershed Enhancement Board, and MidCoast Watersheds Council.,} } @article {33341, title = {American Bird Conservancy: Site Nomination Form}, year = {1998}, note = {Good maps}, month = {1998}, keywords = {aquatic vegetation, bald eagle=Haliaeetus leucocephalus, biological, birds, black brant=Branta bernicla nigricans, brown pelican=Pelecanus occidentalis, caspian tern=Sterna caspia, depleted populations, economics, eelgrass=Zostera marina, general ecosystem description, geographical distribution, green crab=Carcinus maenas, habitat conservation, harlequin duck=Histrionicus histrionicus, Heermann{\textquoteright}s gull=Larus heermanni, historical, human impacts, introduced species, land ownership, land use, Lower Yaquina River, mew gull=Larus canus, natural resource management, peregrine falcon=Falco peregrinus, pesticides, physical modifications, purple martin=Progne subis, recreational fisheries, sanderling=Calidris alba, sediments, temporal distribution, tourism, toxicity, water pollution, western grebe=Aechmophorus occidentalis, western gull=Larus occidentalis, whimbrel=Numenius phaeopus, Yaquina Bay, Yaquina Head, Yaquina River Basin}, author = {Bayer, Range D.} } @proceedings {33381, title = {Change in Pacific Northwest coastal ecosystems: proceedings of the Pacific Northwest Coastal Ecosystems Regional Study Workshop}, volume = {no.11}, year = {1998}, note = {"This document presents the results of a workshop conducted during August, 1996, to better define a research agenda to study the combined effects of natural variability and anthropogenic change in Pacific Northwest coastal ecosystems." (p.3) Meeting held August 3-4,1996.}, pages = {342 p.}, publisher = {NOAA Coastal Ocean Office}, address = {Troutdale, Or.}, keywords = {biological, chinook salmon=Oncorhynchus tshawytscha, chum salmon=Oncorhynchus keta, coastal upwelling, Columbia River estuary, community ecology, Coos River estuary, ecological succession, ecological values, ecosystem modeling, environmental policy and law, estuarine dynamics, general, general ecosystem description, historical, human impacts, land use, Pacific salmonids=Oncorhynchus species, physical, physical modifications, population biology, steelhead=Oncorhynchus mykiss (rainbow trout=Salmo gairdneri), Yaquina Bay, Yaquina River, Yaquina River Basin}, url = {https://repository.library.noaa.gov/view/noaa/1668}, author = {McMurray, Gregory R. and Robert J Bailey} } @inbook {51441, title = {Formula-based hazard assessment methodologies for coastal bluff-backed and slide-backed shorelines, Yaquina Head to Seal Rock, Lincoln County, Oregon}, booktitle = {Environmental, Groundwater and Engineering Geology: Applications from Oregon}, series = {Special Publication / Association of Engineering Geologists}, volume = {no.11}, year = {1998}, note = {Gives a formula for calculating how far developments should be set back from the cliff edge in order to account for expected erosion and slides. The area north of Grant Creek had a much higher rate of erosion.}, pages = {p.451-463}, address = {Belmont, Cal.}, keywords = {Agate Beach, coastal hazards, erosion, geology, Grant Creek, Jump-Off Joe, landslides, Lost Creek, Seal Rock, soils, South Beach, Yaquina Head}, author = {Gless, J. Douglas and Humphrey, Christopher C.}, editor = {Burns, Scott} } @inbook {51446, title = {Geologic hazards of development on sand dunes along the Oregon Coast}, booktitle = {Environmental, Groundwater and Engineering Geology: Applications from Oregon}, series = {Special Publication / Association of Engineering Geologists}, volume = {no.11}, year = {1998}, note = {{\textquotedblleft}There are many geologic hazards associated with development on sand dunes. These include wind erosion and deposition, water erosion and flooding from storm waves and rip currents, water erosion and flooding from tsunamis, and contamination of freshwater aquifers with associated pollution of beaches and rivers.{\textquotedblright} (p.436) Lists areas vulnerable to coastal hazards due to unwise development in dune areas.}, pages = {p.429-438}, address = {Belmont, Cal.}, keywords = {Alsea Spit, American dune grass = Leymus mollis, coastal hazards, Coquille River Spit, earthquakes, erosion, European beachgrass = Ammophila arenaria, flooding, Florence (Or.), Gearhart (Or.), Gold Beach (Or.), human impacts, Nedona Beach, Pacific City (Or.), sand dunes, Seaside (Or.), Siletz River Spit, South Beach (Or.), tsunamis, urban development, winds, Yaquina River}, author = {Reckendorf, Frank}, editor = {Burns, Scott} } @article {33346, title = {Photoinduced toxicity of PAHs amd alkylated PAHs to a marine infaunal amphipod (Rhepoxynius abronius)}, journal = {Archives of Environmental Contamination and Toxicology}, volume = {34}, year = {1998}, month = {1998}, pages = {235-240}, keywords = {Alsea River estuary, amphipods, aquatic invertebrates, biological, chemical, crustaceans, light, Rhepoxynius abronius, toxicity, water pollution, Yaquina Bay}, author = {Boese, Bruce L. and Lamberson, Janet O. and Swartz, Richard C. and Ozretich, Robert J. and Cole, Faith A.} } @mastersthesis {51406, title = {Scourability of Weak Rock in the Oregon Coast Range}, year = {1998}, note = {Bridges over streams can be undermined by erosion from river scour. In this thesis, the author examined 11 bridges in the Oregon Coast Range. {\textquotedblleft}A preliminary model has been proposed wherein the degradation of the stream channel is related to the abrasive resistance of the bedrock and the area under the daily stream power. This method provides an estimate of the degradation of the stream bed due to abrasion by bedload and flood events, not necessarily local or contraction scour.{\textquotedblright} (from the Abstract) Two bridge sites on the Yaquina and three on the Alsea are discussed. Major professor was Stephen E. Dickenson.}, pages = {80 p.}, school = {School of Engineering, Oregon State University}, type = {Masters Thesis}, edition = {M.S.}, chapter = {Dept. of Civil Engineering}, address = {Corvallis, Or.}, keywords = {Alsea River, bridges, coastal hazards, engineering, erosion, Five Rivers, flooding, geology, hydrology, Luckiamute River, Middle Fork Coquille River, Mill Creek (Yamhill), Nestucca River, sediments, South Yamhill River, theses, Yaquina River}, url = {https://ir.library.oregonstate.edu/concern/graduate_thesis_or_dissertations/cv43p044f}, author = {Baillie, Michael W.} } @conference {33371, title = {Socioeconomic causes and consequences of coastal ecosystems change}, booktitle = {Change in Pacific Northwest coastal ecosystems: proceedings of the Pacific Northwest Coastal Ecosystems Regional Study Workshop.}, series = {NOAA Coastal Ocean Program Decision Analysis Series}, volume = {no.11}, year = {1998}, note = {Meeting held Aug. 13-14, 1996. Recommends changes in criteria for decision-making.}, month = {Aug. 13-14 1996}, pages = {39-89}, publisher = {NOAA Coastal Ocean Office}, organization = {NOAA Coastal Ocean Office}, address = {Troutdale, Or.}, keywords = {biological, ecological values, economics, environmental policy and law, general, historical, human impacts}, url = {https://repository.library.noaa.gov/view/noaa/1668}, author = {Huppert, Daniel D. and Olson, Annette M. and Kate T and Marc J. Wing Hershman and Sweeney, Caitlin M.}, editor = {McMurray, Gregory R. and Robert J Bailey} } @article {33401, title = {Status review of chinook salmon from Washington, Idaho, Oregon, and California}, volume = {no.35}, year = {1998}, note = {NOAA seems to have an earlier version of this report (their version, Dec. 1997) on their website as the source for the online copy. The team studying Chinook salmon felt that for the Oregon Coast this species is not in danger of extinction, nor thought to become extinct "in the forseeable future" (p.249). Appendix D gives the known history of hatchery releases. }, month = {1998, Feb.}, pages = {443 p.}, institution = {U.S. Dept. of Commerce, National Oceanic and Atmospheric Administration, National Marine Fisheries Service}, address = {[Seattle, Wash.] }, keywords = {Alsea River, Chinook salmon = Oncorhynchus tshawytscha, Coos River, Coquille River, endangered species, environmental policy and law, general ecosystem description, genetics, hatcheries, historical, Kilchis River, life history information, Miami River, Millicoma River, natural resource management, Necanicum River, Nehalem River, Nestucca River, population biology, population count, Salmon River, salmonid species, Siletz River, Siuslaw River, statistics, Tillamook River, Trask River, Umpqua River, Wilson River, Yachats River, Yaquina River}, url = {https://repository.library.noaa.gov/view/noaa/3034}, author = {Myers, James M. and Kope, Robert G. and Bryant, Gregory J. and Teel, David J. and Lierheimer, Lisa J. and Wainwright, Thomas C. and Grant, W. Stewart and Waknitz, F. William and Neely, Kathleen and Lindley, Steven T. and Waples, Robin S.} } @conference {33361, title = {Variability and stability of climatic/oceanic regimes in the Pacific Northwest}, booktitle = {Change in Pacific Northwest coastal ecosystems: proceedings of the Pacific Northwest Coastal Ecosystems Regional Study Workshop.}, series = {NOAA Coastal Ocean Program Decision Analysis Series}, volume = {no.11}, year = {1998}, note = {Meeting held August 13-14, 1996.Uses a hierarchy of temporal scales to analyze climate and ocean regimes. Chart of hypothesized changes regarding global warming p.132.}, pages = {91-179}, publisher = {NOAA Coastal Ocean Office}, organization = {NOAA Coastal Ocean Office}, address = {Troutdale, Or.}, keywords = {biological, coastal upwelling, ecological values, ecosystem modeling, estuarine dynamics, general, physical}, url = {https://repository.library.noaa.gov/view/noaa/1668}, author = {Greenland, David}, editor = {McMurray, Gregory R. and Robert J Bailey} } @conference {32131, title = {Variability of Pacific Northwest marine ecosystems and relation to salmon production}, booktitle = {Change in Pacific Northwest coastal ecosystems: proceedings of the Pacific Northwest Coastal Ecosystems Regional Study Workshop.}, series = {NOAA Coastal Ocean Program Decision Analysis Series}, volume = {no.11}, year = {1998}, note = {Meeting held Aug. 13-14, 1996. Contemporary salmon production (hatchery and wild) for the Yaquina are shown (chart p. 216) to be 52\% of 1890 production.}, pages = {p.181-252}, publisher = {NOAA Coastal Ocean Office}, organization = {NOAA Coastal Ocean Office}, address = {Troutdale, Or.}, keywords = {biological, chinook salmon=Oncorhynchus tshawytscha, chum salmon=Oncorhynchus keta, coastal upwelling, coho salmon=Oncorhynchus kisutch, community ecology, ecological succession, ecosystem modeling, estuarine dynamics, general, general ecosystem description, Pacific salmonids=Oncorhynchus species, physical, sockeye salmon=Oncorhynchus nerka, steelhead=Oncorhynchus mykiss (rainbow trout=Salmo gairdneri)}, url = {https://repository.library.noaa.gov/view/noaa/1668}, author = {Bottom, Daniel L. and Lichatowich, James A. and Frissell, Christopher A.}, editor = {McMurray, Gregory R. and Robert J Bailey} } @proceedings {33441, title = {Variability of riverine and estuarine ecosystem productivity for supporting Pacific salmon}, volume = {no.11}, year = {1998}, note = {Meeting held Aug. 13-14, 1996. Recommends future directions for research.}, month = {1996, Aug. 13-14}, pages = {253-301}, publisher = {NOAA Coastal Ocean Office}, address = {Troutdale, Or.}, keywords = {biological, chinook salmon=Oncorhynchus tshawytscha, chum salmon=Oncorhynchus keta, coho salmon=Oncorhynchus kisutch, community ecology, ecosystem modeling, environmental policy and law, estuarine dynamics, Pacific salmonids=Oncorhynchus species, sockeye salmon=Oncorhynchus nerka, steelhead=Oncorhynchus mykiss (rainbow trout=Salmo gairdneri)}, url = {https://repository.library.noaa.gov/view/noaa/1668}, author = {Wissmar, Robert C. and Simenstad, Charles A.}, editor = {McMurray, Gregory R. and Robert J Bailey} } @article {33271, title = {Cascadia subduction zone tsunamis: hazard mapping at Yaquina Bay, Oregon: Final technical report to the National Earthquake Hazard Reduction Program}, volume = {no.0-97-34}, year = {1997}, month = {Dec_1997}, institution = {Department of Oregon Geology and Mineral Industries}, address = {Portland, OR}, keywords = {flooding, geological, tsunamis, Yaquina Bay}, url = {https://pubs.oregon.gov/dogami/ofr/O-97-34.pdf}, author = {Priest, George R. and Myers, Edward and Baptista, Antonio M. and Fleuck, Paul and Wang, Keline and Kamphaus, Robert A. and Peterson, Curt D.} } @article {36666, title = {The European Green Crab (Carcinus maenas) in Oregon: A Preliminary Survey of Yaquina, Coos, Winchester and Siletz Bays}, year = {1997}, note = {Accessed by opening a .zip file. {\textquotedblleft}During the summer and fall of 1997, the students and instructors of an Oregon State University Zoology class (Zoology 401/Research) searched for the presence of the European Green Crab (Carcinus maenas) in Coos, Winchester, Yaquina and Siletz Bays, Oregon and also took inventories of common intertidal species... We trapped one adult male green crab at Pony Point in Coos Bay on October 26, 1997. This crab measured 86.5 mm in carapace width and represents the largest specimen so far collected in Oregon. All the green crabs retrieved in Coos Bay have been large adults between 58 and 86 mm. We searched gravel substrates below boulders and algal blades, but never recovered any young-of the-year-green crabs in Coos, Winchester, Yaquina or Siletz Bays. These findings suggest that one year class (perhaps 1995) established itself in Coos Bay, but at present is not abundant enough to perpetuate itself.{\textquotedblright} (from the Abstract)}, institution = {Oregon State University}, address = {Corvallis, Or.}, keywords = {algae, aquatic invertebrates, Charleston (OR.), Coos Bay, Craigie Point, Criteser{\textquoteright}s Moorage, crustaceans, European green crab = Carcinus maenas, Fucus spp., Georgia-Pacific, Hatfield Marine Science Center, Hinton Point, Idaho Point, invasive species, molluscs, Oregon Oyster Farm, Oregon shore crab = Hemigrapsus oregonensis, Pony Point, Purple shore crab = Hemigrapsus nudus, River Bend, salinity, Sawyer{\textquoteright}s Landing, Schooner Creek, Siletz Bay, spatial distribution, species list, Umpqua River estuary, Umpqua River finger jetty, Umpqua triangle, Winchester Bay, Yaquina Bay south jetty}, url = {https://ir.library.oregonstate.edu/concern/defaults/xg94hv61v}, author = {Angel, Tiah and Bassett, Zasha and Chipman, Brian and Cleveland, Kimberly and Cronick, Tamisha and Ehlig, Janette and Frerich, Dan and Hunt, Chris and Ison, Todd and McGuire, Angela and Oliver, Jennifer and Schmelter, Anja and Whitsett, Jennifer} } @article {33206, title = {Evaluation of a first-order model for the prediciton of the bioaccumulation of PCB{\textquoteright}s and DDT from sediment into the marine deposit-feeding clam Macomoa nasuta}, journal = {Environmental Toxicology and Chemistry}, volume = {16}, number = {7}, year = {1997}, month = {1997}, pages = {1545-1553}, keywords = {aquatic invertebrates, bent-nose clam=Macoma nasuta, biological, bivalves, chemical, DDT, molluscs, polychlorinated biphenyls, sediments, toxicity, water pollution, Yaquina Bay}, author = {Boese, Bruce L. and Lee, Henry II. and Echols, Scott} } @book {33291, title = {Molluscan fisheries in Oregon: past, present, and future}, series = {The history, present condition, and future of the molluscan fisheries of North and Central America and Europe: Volume 2, Pacific Coast and supplemental topics}, number = {no.128}, year = {1997}, note = {Good photographs and maps}, month = {December_1997}, pages = {p.75-87}, publisher = {U.S. Department of Commerce}, organization = {U.S. Department of Commerce}, keywords = {Alsea River estuary, aquaculture, aquatic invertebrates, bent-nose clam=Macoma nasuta, biological, bivalves, blue mussel=Mytilus edulis, butter clam=Saxidomus giganteus, California mussel=Mytilus californianus, cephalopods, commercial fisheries - shellfish, community ecology, Coos River estuary, eastern oyster=Crassostrea virginica, economics, edible oyster=Ostrea edulis, historical, introduced species, kitchen middens, molluscs, natural resource management, Netarts estuary, Nuttall cockle=Clinocardium nuttallii, Olympia oyster=Ostrea lurida (Ostrea conchaphila), Pacific littleneck=Leukoma staminea, Pacific oyster=Crassostrea gigas, Pacific razor=Siliqua patula, pulp mill effluent, recreational fisheries - shellfish, shellfish poisoning, softshell clam=Mya arenaria, Umpqua River estuary, water pollution, Yaquina Bay}, url = {https://spo.nmfs.noaa.gov/sites/default/files/tr128opt.pdf}, author = {Robinson, Anja M.}, editor = {MacKenzie, Clyde L. Jr. and Burrell, Victor G. Jr. and Rosenfield, Aaron and Hobart, WIllis L.} } @inbook {33221, title = {Oregon wet site basketry: a review of structural types}, booktitle = {Occasional Papers / Association of Oregon Archaeologists}, series = {Contributions to the Archaeology of Oregon, 1995-1997}, volume = {no.6}, year = {1997}, note = {This article is not about baskets, as much as it is about woven plant materials used for many purposes. At Yaquina Bay, the Ahnkuti Site is a fish-trapping weir on Yaquina Bay, and the "basketry" here consists of twined structures that may have been weir panels or parts of cylindrical fish traps. Two other sites on Yaquina Bay are mentioned. }, pages = {p.185-204}, publisher = {Association of Oregon Archaeologists}, organization = {Association of Oregon Archaeologists}, address = {Eugene, Or.}, keywords = {Ahnkuti Site, archeology, Raccoon Slough, Yaquina River}, author = {Connolly, Thomas J. and Byram, Robert Scott}, editor = {Oetting, Albert C} } @article {33311, title = {Photoactivation and toxicity of mixtures of polyclyclic aromatic hydrocarbon compounds in marine sediments}, journal = {Environmental Toxicology and Chemistry}, volume = {16}, number = {10}, year = {1997}, month = {October_1997}, pages = {2151-2157}, keywords = {amphipods, chemical, hydrocarbons, Idaho Flats, Rhepoxynius abronius, sediment data, sediments, toxicity}, author = {Swartz, Richard C. and Ferraro, Steven P. and Lamberson, Janet O. and Cole, Faith A. and Ozretich, Robert J. and Boese, Bruce L. and Schults, Donald W. and Behrenfeld, Michael and Ankley, Gerald T.} } @article {33201, title = {Photoinduced toxicity of fluoranthene to seven marine benthic crustaceans}, journal = {Archives of Environmental Contamination and Toxicology}, volume = {32}, number = {4}, year = {1997}, month = {1997}, pages = {389-393}, keywords = {Alsea River estuary, amphipods, aquatic invertebrates, biological, chemical, crustaceans, Eohaustorius species, fluoranthene, light, Rhepoxynius abronius, toxicity, water pollution, Yaquina Bay}, author = {Boese, Bruce L. and Lamberson, Janet O. and Swartz, Richard C. and Ozretich, Robert J.} } @article {33091, title = {Censuses of black brant at Yaquina estuary, Lincoln County, Oregon}, journal = {Journal of Oregon Ornithology}, volume = {6}, year = {1996}, note = {Black Brant (Branta bernicla nigricans) had two different seasonal patterns of occurrence at Yaquina Estuary. At embayment areas with eelgrass (Zostera marina), Brant typically arrived between October 22 and November 4, Brant numbers progressively climbed in November, Brant abundance in December-January was relatively constant, and Brant numbers often fluctuated greatly during spring migration in February-April. At a site near the estuary mouth where there was little eelgrass, Brant customarily only appeared during spring migration. About 300-500 Brant wintered at the Yaquina in the 1980{\textquoteright}s, and usually fewer than 700 Brant were counted during spring migration.}, month = {1996}, pages = {p.723-780}, keywords = {Black Brant = Branta bernicla nigricans, eelgrass = Zostera marina, temporal abundance, temporal distribution, Yaquina Bay}, url = {https://ir.library.oregonstate.edu/concern/conference_proceedings_or_journals/df65vd31d}, author = {Bayer, Range D.} } @proceedings {33176, title = {Human intervention in Pacific Northwest coastal ecosystems}, volume = {no.11}, year = {1996}, note = {Timeline of major human events p.7. Charts show changes regarding dam construction, tidal marsh loss, deep riverine pool loss, salmon landings.}, month = {1998}, pages = {5-37}, publisher = {NOAA Coastal Ocean Office}, address = {Troutdale, Oregon}, keywords = {biological, coastal upwelling, Columbia River estuary, Coos River estuary, ecological values, ecosystem modeling, environmental policy and law, general, general ecosystem description, historical, human impacts, land use, physical, physical modifications, Yaquina Bay, Yaquina River, Yaquina River Basin}, url = {https://repository.library.noaa.gov/view/noaa/1668}, author = {Thom, Ronald M. and Brode, Amy B.}, editor = {McMurray, Gregory R. and Robert J Bailey} } @article {33096, title = {Macrophyton and tides at Yaquina estuary, Lincoln County, Oregon}, journal = {Journal of Oregon Ornithology}, volume = {6}, year = {1996}, month = {1996}, pages = {p.781-795}, keywords = {abundance, aquatic vegetation, Black Brant = Branta bernicla nigricans, Boone Slough, eelgrass = Zostera marina, Fucus species, Idaho Flats, Sally{\textquoteright}s Bend, temporal distribution, Yaquina Bay}, url = {https://ir.library.oregonstate.edu/concern/conference_proceedings_or_journals/wh246x921}, author = {Bayer, Range D.} } @article {33101, title = {Newport North Marina, Yaquina Bay, Oregon, design for wave protection: coastal model investigation}, volume = {no.96-2}, year = {1996}, note = {"January 1996" Photographs, charts.}, pages = {115 p.}, keywords = {breakwater, Port of Newport, wave data, wave height, Yaquina Bay}, url = {https://apps.dtic.mil/dtic/tr/fulltext/u2/a304942.pdf}, author = {Bottin, Jr., Robert R. and Briggs, Michael Jeffrey and United States. Army. Corps of Engineers. Portland District, and U.S. Army Engineer Waterways Experiment Station, and U.S. Coastal Engineering Research Center,} } @article {33106, title = {Status review of West Coast steelhead from Washington, Idaho, Oregon, and California}, volume = {no.27}, year = {1996}, note = {Yaquina River winter steelhead run trend was downward (-2.9\%/year). This estimate was based on the run on Big Elk Creek. Hatchery practices (past and present) identified as major threat to genetic integrity for steelhead in this area.}, pages = {261 p.}, institution = {U.S. National Marine Fisheries Service}, address = {Seattle, Wash.?}, keywords = {Big Elk Creek, endangered species, hatcheries, management plans, steelhead trout = Oncorhynchus mykiss, Yaquina River}, url = {https://www.nwfsc.noaa.gov/assets/25/5592_06172004_122523_steelhead.pdf}, author = {Busby, Peggy J. and Wainwright, Thomas C. and Bryant, Gregory J. and Lierheimer, Lisa J. and Waples, Robin S. and Waknitz, F. William and Lagomarsino, Irma and U.S. National Marine Fisheries Service. Northwest Fisheries Science Center, and U.S. National Marine Fisheries Service. Southwest Region. Protected Species Management Division,} } @article {33086, title = {Transcription of Vernon Bailey{\textquoteright}s field notes for his 1909 trip to Lincoln County, Coos County, and Curry County, Oregon with notes about biological survey records}, journal = {Journal of Oregon Ornithology}, volume = {5}, year = {1996}, month = {1996c}, pages = {p.614-625}, keywords = {abundance, biological, birds, Coos River estuary, Rogue River estuary, species list, Yaquina Bay}, url = {https://ir.library.oregonstate.edu/concern/conference_proceedings_or_journals/d504rr04r}, author = {Bayer, Range D.} } @inbook {32991, title = {Investigation of damage at the Yaquina Bay north jetty}, booktitle = {Case Histories of the Design, Construction, and Maintenance of Rubble Mound Structures}, year = {1995}, note = {aerial photographs}, pages = {p.227-249}, publisher = {American Society of Civil Engineers}, organization = {American Society of Civil Engineers}, address = {New York, NY}, keywords = {coastal hazards, dredging, general, historical, hydrology, North Jetty, physical, physical modifications, South Jetty, Yaquina Bay, Yaquina Bay Bar, Yaquina Reef}, author = {Hughes, Steven A. and Peak, Robert C. and Carver, Robert D. and Francis, James D. and Bertrand, Gregg M.}, editor = {Magoon, Orville T. and Davidson, D. D. (eds.)} } @article {32946, title = {Review of ecology and fishery of the Olympia oyster, Ostrea lurida with annotated bibliography}, journal = {Journal of Shellfish Research}, volume = {14}, number = {2}, year = {1995}, month = {December_1995}, pages = {501-518}, keywords = {aquaculture, aquatic invertebrates, bibliography, biological, bivalves, commercial fisheries, depleted populations, geographical distribution, human impacts, introduced species, life history information, molluscs, Olympia oyster=Ostrea lurida (Ostrea conchaphila), Pacific oyster=Crassostrea gigas, population biology, temporal distribution, water pollution, Yaquina Bay}, author = {Baker, Patrick} } @article {32951, title = {Spring and fall migration of geese across the coast range of Lincoln County, Oregon}, journal = {Oregon Birds}, volume = {21}, number = {no.1}, year = {1995}, month = {1995}, pages = {p.10-12}, keywords = {Alsea River estuary, biological, birds, Canada goose=Branta canadensis, population biology, reproductive behavior, Siletz River estuary, snow goose=Chen caerulescens, Thornton Creek, white-fronted goose=Anser albifrons, Yaquina Bay, Yaquina River, Yaquina River Basin}, author = {Bayer, Range D. and Lowe, Roy W. and Faxon Darrel} } @conference {32986, title = {Status of coastal cutthroat trout in Oregon}, booktitle = {Sea-Run Cutthroat Trout: Biology, Management, and Future Conservation}, year = {1995}, month = {1997}, pages = {p.57-67}, publisher = {Oregon Chapter of the American Fisheries Society}, organization = {Oregon Chapter of the American Fisheries Society}, address = {Reedsport, Or.}, keywords = {Big Elk Creek, biological, catch statistics, coastal cutthroat trout=Oncorhynchus clarki clarki, fishes, hatchery salmonids, historical, life history information, Pacific salmonids=Oncorhynchus species, population biology, population count, Yaquina River}, author = {Hooton, Robert M.}, editor = {Hall, James D. and Bisson, Peter A. and Gresswell, Robert E} } @article {33076, title = {Status review of coho salmon from Washington, Oregon, and California}, volume = {no.24}, year = {1995}, note = {The Biological Review Team concluded that "coho salmon in this ESU are not at immediate risk of extinction but are likely to become endangered in the future if present trends continue." The Team noted that "spawning escapements have declined substantially during this century and may now be at less than 5\% of their abundance in the early 1900s." (p.128) }, pages = {258 p.}, institution = {U.S. National Marine Fisheries Service, Northwest Fisheries Science Center }, address = {Seattle, Wash.}, keywords = {Coho salmon = Oncorhynchus kisutch, Coos River, Coquille River, endangered species, environmental policy and law, general ecosystem description, genetics, hatcheries, historical, life history information, Miami River, natural resource management, Necanicum River, Nehalem River, Nestucca River, population biology, population count, Salmon River, salmonid species, Siletz River, Siuslaw River, statistics, Tillamook River, Umpqua River, Wilson River, Yaquina River}, url = {https://www.nwfsc.noaa.gov/assets/25/5585_06172004_123333_coho.pdf}, author = {Weitkamp, Laurie A. and Wainwright, Thomas C. and Bryant, Gregory J. and Milner, George B. and Teel, David J. and Kope, Robert G. and Waples, Robin S.} } @article {32866, year = {1994}, note = {[Personal Communication.]}, month = {July 19, 1994}, address = {Newport, OR}, keywords = {economics, general, tourism, Yaquina Bay}, author = {Bayfront Association,}, editor = {Bayfronters} } @article {36616, title = {Harlequin duck records mostly from Lincoln County, Oregon}, journal = {Journal of Oregon Ornithology}, volume = {3}, year = {1994}, note = {{\textquotedblleft}612 Harlequin Duck records are given for Lincoln County, and another 74 records are listed for other coastal counties. In Lincoln County, Harlequins are found mostly in winter, there were often more males than females, the most ever counted was 14, and there is no indication that they nested.{\textquotedblright} (from the Abstract)}, pages = {p.243-260}, keywords = {abundance, Alsea Bay, Beaver Creek, birds, Depoe Bay, Devil{\textquoteright}s Lake, Eckman Lake, Harlequin duck = Histrionicus histrionicus, Hatfield Marine Science Center, Idaho Flats, Nelscott (Or.), Ona Beach, Sally{\textquoteright}s Bend, Salmon River Estuary, Seal Rock, Siletz Bay, South Jetty, spatial distribution, temporal distribution, Yachats, Yaquina Bay, Yaquina Head}, url = {https://ir.library.oregonstate.edu/concern/conference_proceedings_or_journals/dj52w9646}, author = {Bayer, Range D.} } @article {32891, title = {Healthy Native Stocks of Anadromous Salmonids in the Pacific Northwest and California}, year = {1994}, note = {Fold-out data maps}, month = {31 December 1994}, institution = {Oregon Trout}, address = {Portland, Or.}, keywords = {biological, geographical distribution, Pacific salmonids=Oncorhynchus species, population biology, Yaquina Bay, Yaquina River, Yaquina River Basin}, author = {Huntington, Charles W. and Nehlsen, Willa and Bowers, Jon and Oregon Trout,} } @article {83288, title = {Personal Communication}, year = {1994}, note = {[Personal Communication.]}, month = {July 19, 1994}, address = {Newport, OR}, keywords = {economics, general, tourism, Yaquina Bay}, author = {Bayfront Association,}, editor = {Bayfronters,} } @article {32871, title = {Stability study of the 1978 jetty rehabilitation, Yaquina Bay, Oregon, in response to 1979-1980 storm season waves}, volume = {no.94-15}, year = {1994}, month = {August_1994}, pages = {128 p.}, institution = {U.S. Army Corps of Engineers}, address = {Vicksburg, MS}, keywords = {mathematical modeling, North Jetty, physical, physical modifications, wave height, Yaquina Bay Bar}, url = {https://archive.org/details/DTIC_ADA284643}, author = {Carver, Robert D. and Briggs, Michael J. and U.S. Army. Corps of Engineers. Waterways Experiment Station ,} } @article {32766, title = {Waterbird records for West and East ponds, South Beach peninsula, Lincoln County}, journal = {Journal of Oregon Ornithology}, volume = {1}, year = {1993}, note = {photographs, data tables}, month = {1993}, pages = {p.35-70}, keywords = {abundance, aquatic vegetation, biological, birds, dragonfly = Anisoptera species, estuarine dynamics, green algae, hatchery salmonids, human impacts, hydrology, Idaho Flats, nutria = Myocastor coypus, Oregon Coast Aquarium, physical modifications, salinity, terrestrial mammals, tidal data, wetland vegetation, Yaquina Bay}, url = {https://ir.library.oregonstate.edu/concern/conference_proceedings_or_journals/nc580s144}, author = {Bayer, Range D.} } @article {32701, title = {Status of Anadromous Salmonids in Oregon Coastal Basins}, year = {1992}, month = {1992}, pages = {83 p.}, institution = {Oregon Department of Fish and Wildlife}, address = {Newport, Or.}, keywords = {biological, chinook salmon=Oncorhynchus tshawytscha, chum salmon=Oncorhynchus keta, coho salmon=Oncorhynchus kisutch, geographical distribution, life history information, Pacific salmonids=Oncorhynchus species, steelhead=Oncorhynchus mykiss}, author = {Nickelson, Thomas E. and Nicholas, J. W. and McGie, Alan M. and Lindsay, Robert B. and Bottom, Daniel L. and Kaiser, Rodney J. and Jacobs, Steven E.} } @article {32561, title = {1991 Annotated Checklist of Terrestrial Birds of the South Beach Penninsula, Lincoln County, Oregon}, year = {1991}, month = {[1991]}, institution = {Gahmken Press}, address = {Newport, Or.}, keywords = {biological, birds, Marine Science Center Dock, Oregon Coast Aquarium}, author = {Bayer, Range D.} } @article {32471, title = {Abundance and distribution of harbor seals (Phoca vitulina) in Oregon, 1975-1983}, journal = {Northwestern Naturalist: A Journal of Vertebrate Biology}, volume = {71}, number = {3}, year = {1990}, note = {"The objectives of this study were to determine the location and use of haulout sites and to document any changes in abundance and distribution of harbor seals in Oregon from 1975 to 1983.}, month = {1990, Winter}, pages = {p.65-71}, keywords = {Alsea Bay, Cape Arago, Cascade Head, Coos Bay, Coquille Point, Harbor seal = Phoca vitulina, Netarts Bay, population count, Siletz Bay, Siltcoos outlet, Siuslaw River, Tillamook Bay, Umpqua River, Yaquina Bay}, author = {Harvey, James T. and Brown, Robin F. and Mate, Bruce R.} } @article {32436, title = {Spatio-temporal fluctuations in the distribution and abundance of demersal fish and epibenthic crustaceans in Yaquina Bay, Oregon}, journal = {Estuaries}, volume = {13}, number = {4}, year = {1990}, month = {December_1990}, pages = {469-478}, keywords = {abundance, aquatic invertebrates, biological, blacktail bay shrimp = Crangon nigricauda, buffalo sculpin = Enophrys bison, Buoy 14, California bay shrimp = Crangon franciscorum, community ecology, crustaceans, decapods, Dungeness crab = Metacarcinus magister (Cancer magister), English sole = Pleuronectes vetulus, fishes, geographical distribution, Grassy Point, McCaffery Slough, Mill Creek, Montgomery Creek, mysids, Neomysis mercedis, Pacific staghorn sculpin = Leptocottus armatus, Port of Newport Dock 5, River mile 16, River Mile 4, shiner perch = Cymatogaster aggregata, Snake prickleback = Lumpenus sagitta, species composition, species list, Starry flounder = Platichthys stellatus, surf smelt = Hypomesus pretiosus, temporal distribution, Toledo Airport, Upper Yaquina River, walleye surfperch = Hyperprosopon argenteum, White seaperch = Phanerodon furcatus, Yaquina Bay, Yaquina Bay Bridge}, author = {DeBen, Waldemar A. and Clothier, William D. and Ditsworth, George R. and Baumgartner, Donald J.} } @article {32346, title = {Archaeology of the North Yaquina Head Shell Middens, Central Oregon Coast}, volume = {no.3}, year = {1989}, note = {Gives results of archeological investigations at two prehistoric shell middens on the north side of Yaquina Head. Has line drawings of artifacts. Seasonal availability of dominant species found is given.}, pages = {86 p.}, institution = {Heritage Research Associates}, address = {Eugene, Or.}, keywords = {archeology, birds, bivalves, California mussel = Mytilus californianus, cormorants (Phalacocorax spp.), crustaceans, fishes, gastropods, Harbor seal = Phoca vitulina, horse barnacle = Semibalanus cariosus, kitchen middens, marine mammals, molluscs, Pacific herring = Clupea pallasi, species list}, author = {Minor, Rick and Barnes, Debra C. and Heritage Research Associates,,} } @article {32281, title = {Effects of solar eclipse on waterbirds at Yaquina estuary, Oregon}, journal = {Oregon Birds}, volume = {15}, number = {3}, year = {1989}, month = {Fall_1989a}, pages = {p.198-200}, keywords = {biological, birds, Main channel, west of Yaquina Bay Bridge, Yaquina Bay}, author = {Bayer, Range D.} } @article {32286, title = {Evaluation and Development of Techniques for Salmon and Steelhead Culture: Yaquina River Fish Management Plan}, journal = {Progress Reports}, year = {1989}, month = {1989}, keywords = {biological, chinook salmon=Oncorhynchus tshawytscha, chum salmon=Oncorhynchus keta, coho salmon=Oncorhynchus kisutch, green sturgeon=Acipenser medirostris, hatchery salmonids, Oregon Aqua-Foods, steelhead=Oncorhynchus mykiss, white sturgeon=Acipenser transmontanus, Yaquina River, Yaquina River Basin}, author = {Borgerson, L.A. and Oregon. Dept. of Fish and Wildlife,} } @article {32291, title = {Review and summary of trace contaminant data for coastal and estuarine Oregon}, volume = {no.42}, year = {1989}, month = {1989}, pages = {115 p.}, keywords = {blue mussel = Mytilus edulis, buffalo sculpin = Enophrys bison, chemical, DDT, English sole = Pleuronectes vetulus, general ecosystem description, hydrocarbons, mercury, Pacific oyster = Crassostrea gigas, pesticides, polychlorinated biphenyls, sand sole = Psettichthys melanostictus, shiner perch = Cymatogaster aggregata, speckled sanddab = Citharichthys stigmaeus, Trace metals, water pollution, water quality, water quality data, Yaquina Bay}, url = {https://repository.library.noaa.gov/view/noaa/2848}, author = {Buchman, M. F.} } @book {32366, title = {Species profiles: life histories and environmental requirements of coastal fishes and invertebrates (Pacific Northwest): coho salmon}, series = {Biological Report (Washington, D.C.)}, volume = {no.82-11.86}, year = {1989}, month = {1989}, pages = {21 p.}, publisher = {Coastal Ecology Group, Waterways Experiment Station, U.S. Army Corps of Engineers}, organization = {Coastal Ecology Group, Waterways Experiment Station, U.S. Army Corps of Engineers}, address = {Vicksburg, Miss.}, keywords = {cutthroat trout = Oncorhynchus clarki, geographic distribution, habitats, life history information, logging, Nehalem River, Nestucca River, taxonomy, Trask River, water quality, water temperature}, url = {https://webharvest.gov/peth04/20041023214018/http://www.nwrc.usgs.gov/wdb/pub/0176.pdf}, author = {Pauley, Gilbert B. and Oshima, Kevin and Bowers, Karen L. and Thomas, G. L.} } @book {83293, title = {Species profiles: life histories and environmental requirements of coastal fishes and invertebrates (Pacific Northwest): sea-run cutthroat trout}, series = {Biological Report (Washington, D.C.)}, volume = {no.82-11.86}, year = {1989}, month = {1989}, pages = {21 p.}, publisher = {Coastal Ecology Group, Waterways Experiment Station, U.S. Army Corps of Engineers}, organization = {Coastal Ecology Group, Waterways Experiment Station, U.S. Army Corps of Engineers}, address = {Vicksburg, Miss.}, keywords = {cutthroat trout = Oncorhynchus clarki, geographic distribution, habitats, life history information, logging, Nehalem River, Nestucca River, taxonomy, Trask River, water quality, water temperature}, url = {https://webharvest.gov/peth04/20041023214018/http://www.nwrc.usgs.gov/wdb/pub/0176.pdf}, author = {Pauley, Gilbert B. and Oshima, Kevin and Bowers, Karen L. and Thomas, G. L.} } @article {24916, title = {Study of Justification for and Benefits from Combined Appropriation for Maintenance Dredging}, year = {1989}, note = {In light of potential budget cuts at the Army Corps of Engineers, the Oregon Ports Division commissioned this study to get the most out of available funding for harbor maintenance through dredging. Among the consultants{\textquoteright} recommendations were to combine all Oregon port maintenance, and to reduce expenditures by reducing dredging targets for some harbors. Includes data on expenditures, summary of dredging by port for 1983-1988, and information on Coast Guard stations. }, pages = {45 p.}, institution = {Benkendorf Associates Corporation}, address = {Portland, Or.}, keywords = {Chetco River, Coquille River, Depoe Bay, dredging, harbors, navigation, ports, Rogue River, Siuslaw River, statistics, Tillamook Bay, Umpqua River, Yaquina Bay}, author = {Benkendorf \& Associates, and Oregon. Ports Division,} } @book {32136, title = {Assessment of pinnped populations in Oregon, April 1984 to April 1985}, series = {NWAFC Processed Report }, volume = {no.88-05}, year = {1988}, month = {April_1988}, pages = {44 p.}, publisher = {Northwest and Alaska Fisheries Center, National Marine Fisheries Service}, organization = {Northwest and Alaska Fisheries Center, National Marine Fisheries Service}, address = {Seattle, WA}, keywords = {biological, California sea lion = Zalophus californianus, Columbia River estuary, feeding behavior, Harbor seal = Phoca vitulina, population biology, population count, Port Orford, Rogue River estuary, Steller sea lion=Eumetopias jubatus, Yaquina Bay}, url = {https://ir.library.oregonstate.edu/concern/defaults/p5547s19s}, author = {Brown, Robin F.} } @article {32126, title = {Changes in waterbird numbers before and after the 1983 oil spill at Yaquina estuary, Oregon}, journal = {Oregon Birds}, volume = {14}, number = {2}, year = {1988}, month = {1988a}, pages = {p.157-161}, keywords = {abundance, biological, birds, Coquille Point, Idaho Flats, Marine Science Center Dock, North Jetty, Sally{\textquoteright}s Bend, water pollution, Yaquina Bay}, author = {Bayer, Range D.} } @book {32121, title = {Oiled birds: how to search for and capture oiled birds at Oregon intertidal areas}, series = {Studies in Oregon Ornithology}, volume = {no.5}, year = {1988}, month = {1988}, pages = {30 p.}, publisher = {Gahmken Press}, organization = {Gahmken Press}, address = {Newport, Or,}, keywords = {biological, birds, water pollution, Yaquina Bay}, url = {https://ir.library.oregonstate.edu/concern/defaults/5138jg27q}, author = {Bayer, Range D.} } @article {32141, title = {Oregon Coastal Coho Salmon Spawning Surveys. 1987-88 Season Data Report. Lincoln Fisheries District [Oregon Aqua-Foods]}, year = {1988}, note = {Mostly statistical tables.}, month = {November_1988}, institution = {Buell \& Associates, Inc.}, address = {Portland, Or.}, keywords = {Alsea River estuary, Bales Creek, Bear Creek, Beaver Creek, Beaver Creek estuary, Big Elk Creek, biological, coho salmon=Oncorhynchus kisutch, Cook Creek, Deer Creek, depleted populations, Feagles Creek, fishes, hatchery salmonids, Hayes Creek, Klamath Creek, Little Elk Creek, Mill Creek, Olalla Creek, reproductive behavior, Salmon Creek, Siletz River estuary, Simpson Creek, Stony Creek, Thornton Creek, Wildcat Creek, Wolf Creek, Wright Creek, Yaquina Bay, Yaquina River}, author = {Buell, J.W. and Kruger, R.L. and Buell \& Associates, Inc., and Oregon Aqua-Foods, Inc.,} } @article {76401, title = {Roles of behavioral and physical factors in larval and juvenile fish recruitment to estuarine nursery areas}, journal = {Larval Fish and Shellfish Transport through Inlets}, volume = {no.3}, year = {1988}, note = {Many marine fish spend parts of their early lives in estuaries. This paper examines those species that spawn at sea and later enter estuaries {\textquotedblleft}as late larvae or early juveniles.{\textquotedblright} (p.51) Which physical and behavioral factors enable these fish to find the estuary and stay there? This excellent review includes a list of offshore, coastal and bay species found in Yaquina Bay in particular developmental stages. }, pages = {p.51-67}, keywords = {Bay goby = Lepidogobus Lepidus, behavior, buffalo sculpin = Enophrys bison, English sole = Parophrys vetulus, juvenile fish, life history information, Pacific herring = Clupea pallasi, Pacific staghorn sculpin = Leptocottus armatus, Red Irish lord = Hemilepdotus hemilepdotus, Rockfish = Sebastes spp., Rosylip sculpin = Ascelichthys rhodorus, sand sole = Psettichthys melanostictus, Sharpnose sculpin = Clinocottus acuticeps, Smelt family = Osmeridae, Yaquina Bay}, author = {Boehlert, George W. and Mundy, Bruce C.} } @book {32146, title = {When Time Seemed to Pause}, year = {1988}, note = {Memoir of a family{\textquoteright}s early 20th-century summer vacations at Yaquina Bay.}, month = {1988}, pages = {13 p.}, publisher = {Lincoln County Historical Society}, organization = {Lincoln County Historical Society}, address = {Newport, Or.}, keywords = {biography, general, historical, Yaquina Bay}, author = {Bynon, Florence} } @article {32091, title = {Four independent approaches to developing sediment quality criteria yield similar values for model contaminents}, journal = {Environmental Toxicology and Chemistry}, volume = {6}, year = {1987}, month = {1987}, pages = {723-725}, keywords = {chemical, hydrocarbons, lead, methodology, polychlorinated biphenyls, sediments, toxicity, Yaquina Bay}, author = {Swartz, Richard C. and Chapman, Peter M. and Barrick, Robert C. and Neff, Jerry M.} } @article {31991, title = {History of estuarine wetland development and alteration: what have we wrought?}, journal = {Northwest Environmental Journal}, volume = {3}, number = {1}, year = {1987}, month = {1987}, pages = {p.43-61}, keywords = {Columbia River estuary, ecological values, environmental policy and law, estuarine dynamics, general, habitat conservation, human impacts, natural resource management, physical modifications, wetland vegetation, Yaquina Bay}, author = {Boule, Marc E. and Bierly, Kenneth F.} } @book {32006, title = {The Oregon Estuary Plan Book}, year = {1987}, note = {includes Oregon estuary maps. A classic work.}, month = {1987}, pages = {126 p.}, publisher = {Oregon Department of Land Conservation and Development}, organization = {Oregon Department of Land Conservation and Development}, address = {Salem, Or.}, keywords = {ecological succession, environmental policy and law, estuaries, estuarine dynamics, map, sediments}, url = {https://ir.library.oregonstate.edu/concern/technical_reports/wd375x07c}, author = {Cortright, Robert and Weber, Jeffrey and Bailey, Robert and Rohse, Mitch and Snow, Patricia and Hill, Starla and Oregon. Department of Land Conservation and Development,} } @article {32001, title = {Pacific Coast Hindcast Phase II Wave Information}, year = {1987}, note = {Also called WIS Report 16.}, month = {May_1987}, pages = {413 p.}, institution = {U.S. Army Corps of Engineers. Coastal Engineering Research Center}, address = {Vicksburg, MS}, keywords = {physical, wave height data}, url = {https://apps.dtic.mil/sti/trecms/pdf/ADA182795.pdf}, author = {Corson, William D. and Abel, C. E. and Brooks, R. M. and Farrar, P. D. and Groves, B. J. and Payne, J. B. and McAneny, D. S. and Tracy, B. A. and U.S. Army. Corps of Engineers. Coastal Engineering Research Center,} } @article {31986, title = {Recrutiment dynamics of metamorphosing English sole Parophyrs vetulus to Yaquina Bay, Oregon}, journal = {Estuarine, Coastal and Shelf Science}, volume = {25}, year = {1987}, month = {September_1987}, pages = {p.261-281}, keywords = {biological, developmental stages, English sole=Pleuronectes vetulus, estuarine dynamics, geographical distribution, hydrology, Main channel, McLean Point, physiology, population biology, salinity, temporal distribution, tidal currents, west of Yaquina Bay Bridge, Yaquina Bay}, author = {Boehlert, George W. and Mundy, Bruce C.} } @article {31981, title = {Winter observations of bald eagles in Yaquina estuary, Oregon}, journal = {The Murrelet}, volume = {68}, year = {1987}, month = {Summer_1987}, pages = {p.39-44}, keywords = {American coot=Fulica americana, bald eagle=Haliaeetus leucocephalus, biological, birds, community ecology, feeding behavior, great blue heron= Ardea herodias, gulls=Larus species, temporal distribution, Yaquina Bay}, author = {Bayer, Range D.} } @article {31821, title = {1884-1923 Oregon coast bird notes in biological survey files}, volume = {no.1}, year = {1986}, month = {1986a}, pages = {67 p.}, institution = {Gahmken Press}, address = {Newport, OR}, keywords = {abundance, biological, birds, geographical distribution, temporal distribution, Yaquina Bay, Yaquina Head}, url = {https://ir.library.oregonstate.edu/concern/defaults/44558f558}, author = {Bayer, Range D.} } @mastersthesis {31836, title = {Cycling of Reduced Trace Gases and Hydroxylamine in Coastal Waters}, year = {1986}, note = {Major professor was Louis I. Gordon. "The distributions and fluxes of methane, carbon monoxide, nitrous oxide, hydrogen, and hydroxylamine were examined in Yaquina Bay, a relatively unpolluted estuary on the coast of Oregon, and Big Lagoon, a meromictic, coastal lagoon in Northern California." (from the Abstract)}, month = {April_1986}, pages = {207 p.}, school = {Oregon State University}, type = {Doctoral Dissertation}, edition = {Ph. D.}, chapter = {College of Oceanography}, address = {Corvallis, Or.}, keywords = {carbon monoxide, chemical, hydrogen, hydroxylamine, methane, nitrous oxide, theses, trace gases, Yaquina Bay}, url = {https://ir.library.oregonstate.edu/concern/graduate_thesis_or_dissertations/7s75dg30x}, author = {Butler, James H} } @article {31826, title = {Fledging common murre killed and abandoned by a gull after leaving the vicinity of the colony}, journal = {The Murrelet}, volume = {67}, year = {1986}, month = {Spring_1986b}, pages = {p.30-31}, keywords = {biological, birds, common murre=Uria aalge, community ecology, glaucous-winged gull=Larus glaucescens, western gull=Larus occidentalis, Yaquina Bay}, author = {Bayer, Range D.} } @article {31831, title = {Seabirds near an Oregon estuarine salmon hatchery in 1982 and during the 1983 El Nino}, journal = {Fishery Bulletin}, volume = {84}, number = {2}, year = {1986}, month = {1986c}, pages = {p.279-286}, keywords = {biological, birds, climate, community ecology, El Nino, feeding behavior, fishes, hatchery salmonids, Yaquina Bay}, url = {https://spo.nmfs.noaa.gov/sites/default/files/pdf-content/1986/842/bayer.pdf}, author = {Bayer, Range D.} } @article {31691, title = {Bill length of herons and egrets as an estimator of prey size}, journal = {Colonial Waterbirds}, volume = {8}, number = {2}, year = {1985}, month = {1985}, pages = {p.104-109}, keywords = {bay pipefish=Syngnathus leptorhynchus, biological, birds, community ecology, feeding behavior, fishes, great blue heron= Ardea herodias, Pacific staghorn sculpin=Leptocottus armatus, Saddleback gunnel=Pholis ornata, shiner perch=Cymatogaster aggregata, snake prickleback=Lumpenus sagitta, starry flounder=Platichthys stellatus, Yaquina Bay}, author = {Bayer, Range D.} } @book {31726, title = {The Effects of Stream Alterations on Salmon and Trout Habitat in Oregon}, year = {1985}, note = {Photocopy in ESA files, West Coast coho.}, month = {1985}, pages = {70 p.}, publisher = {Oregon Department of Fish and Wildlife}, organization = {Oregon Department of Fish and Wildlife}, address = {Portland, Or.}, keywords = {Alsea River, Butler Creek, Chinook salmon = Oncorhynchus tshawytscha, chum salmon = Oncorhynchus keta, Coho salmon = Oncorhynchus kisutch, Coos River, Coquille River, cutthroat trout = Oncorhynchus clarki, depleted populations, ecosystem health, erosion, habitats, human impacts, hydrology, Kilchis River, landslides, Little Nestucca River, logging, Lower Umpqua River, Miami River, Mill Creek, Millicoma River, mining, North Umpqua River, Railroad Creek, Rock Creek, salmonid species, Sand Lake, Scholfield Creek, Siletz River, Siuslaw River, Smith River, sockeye salmon = Oncorhynchus nerka, South Umpqua River, Steamboat Creek, steelhead trout = Oncorhynchus mykiss, Tillamook River, Tillamook River Basin, Tioga Creek, Trask River, Wilson River, Yaquina River}, url = {https://ir.library.oregonstate.edu/concern/technical_reports/r494vk98q}, author = {Bottom, Daniel L. and Howell, P. J. and Rogers, J. D. and Oregon. Dept. of Fish and Wildlife,} } @article {31696, title = {Harbor porpoises at Yaquina estuary, Oregon}, journal = {The Murrelet}, volume = {66}, year = {1985}, month = {Summer_1985b}, pages = {p.60-62}, keywords = {abundance, biological, harbor porpoise=Phocoena phocoena, Idaho Flats, Lower Yaquina River, marine mammals, population biology, Sally{\textquoteright}s Bend, Yaquina Bay}, author = {Bayer, Range D.} } @article {31716, title = {Interactions of great blue herons and gulls}, journal = {Wilson Bulletin}, volume = {97}, year = {1985}, month = {December_1985}, pages = {p.538-541}, keywords = {biological, birds, community ecology, feeding behavior, great blue heron= Ardea herodias, gulls=Larus species, territoriality, Yaquina Bay}, url = {https://sora.unm.edu/sites/default/files/journals/wilson/v097n04/p0538-p0541.pdf}, author = {Bayer, Range D.} } @article {31701, title = {Nearshore flights of seabirds past Yaquina estuary, Oregon, during the 1982 and 1983 summers}, journal = {Western Birds}, volume = {16}, year = {1985}, month = {1985}, pages = {p.169-173}, keywords = {abundance, biological, birds, South Jetty, temporal distribution, Yaquina Bay}, url = {https://sora.unm.edu/sites/default/files/journals/wb/v16n04/p0169-p0174.pdf}, author = {Bayer, Range D.} } @article {31721, title = {Northward occurrence of the opaleye Girella nigricans , and the sharpnose seaperch, Phanerodon atripes}, journal = {California Fish and Game}, volume = {71}, number = {1}, year = {1985}, month = {1985}, pages = {p.56-57}, keywords = {biological, feeding behavior, fishes, geographical distribution, opaleye=Girella nigricans, Otter Rock, population biology, sharpnose seaperch=Phanerodon atripes}, author = {Bond, Carl E. and Olson, Robert E.} } @article {31731, title = {Response of Estuarine Diatom Assemblages to Ultraviolet-B Radiation (290-320 nm)}, volume = {EPA/600/D-85/016}, year = {1985}, note = {"Artificial substrates colonized by diatoms from Yaquina Estuary, Oregon, were exposed to solar visible radiation and three levels of ultraviolet radiation (UV-B, 290-320 nm). . . The results indicated that daily exposure to enhanced levels of UV-B radiation was associated with a decrease in species diversity of benthic diatom assemblages during all experiments after four weeks of growth. However, changes in taxonomic structure were not accompanied by a significant depression in chlorophyll a concentration, biomass, or radiocarbon uptake. In fact, in some experiments enhanced levels of UV-B radiation appeared to have a stimulatory effect on the latter parameters." *from the Abstract)}, month = {January_1985}, pages = {14 p.}, institution = {U.S. Environmental Protection Agency}, address = {Corvallis, Or.}, keywords = {aquatic vegetation, biological, diatoms, light, population biology, primary production, Yaquina Bay}, url = {https://ir.library.oregonstate.edu/concern/technical_reports/qj72p771p}, author = {Brooker, D.L. and Worrest, R.C. and U.S.Environmental Protection Agency,} } @article {31706, title = {Shiner perch and Pacific staghorn sculpins in Yaquina estuary, Oregon}, journal = {Northwest Science}, volume = {59}, number = {3}, year = {1985}, month = {1985e}, pages = {p.230-240}, keywords = {abundance, aquatic vegetation, biological, eelgrass=Zostera marina, fishes, grasses, life history information, Pacific staghorn sculpin=Leptocottus armatus, Sally{\textquoteright}s Bend, shiner perch=Cymatogaster aggregata, temporal distribution, Yaquina Bay}, author = {Bayer, Range D.} } @article {31711, title = {Six years of harbor seal censusing at Yaquina estuary, Oregon}, journal = {The Murrelet}, volume = {66}, year = {1985}, month = {Summer_1985f}, pages = {p.44-49}, keywords = {abundance, biological, harbor seal=Phoca vitulina, Idaho Flats, Lower Yaquina River, marine mammals, population biology, Sally{\textquoteright}s Bend, Yaquina Bay}, author = {Bayer, Range D.} } @article {31621, title = {Carbon assimilation as a function of ingestion rate in larval Pacific herring, Clupea harengus pallasi Valenciennes}, journal = {Journal of Experimental Marine Biology and Ecology}, volume = {79}, year = {1984}, month = {1984}, pages = {p.251-262}, keywords = {biological, developmental stages, feeding behavior, growth, Oregon State University Hatfield Marine Science Center, Pacific herring=Clupea pallasi, Yaquina Bay}, author = {Boehlert, George W. and Yoklavich, Mary A.} } @article {31616, title = {CBC analysis: comparison of coastal Christmas Bird Counts}, journal = {Oregon Birds}, volume = {10}, year = {1984}, month = {1984}, pages = {p.115-125}, keywords = {abundance, biological, birds, Chetco River estuary, Columbia River estuary, Coos River estuary, Rogue River estuary, Tillamook estuary, Yaquina Bay}, author = {Bayer, Range D. and Krabbe, Jan} } @article {31596, title = {Foraging ground displays of great blue herons at Yaquina estuary, Oregon}, journal = {Colonial Waterbirds}, volume = {7}, year = {1984}, month = {1984}, pages = {p.45-54}, keywords = {biological, birds, feeding behavior, great blue heron= Ardea herodias, population biology, Yaquina Bay}, author = {Bayer, Range D.} } @proceedings {31626, title = {Landslide hazard rating for portions of the Oregon coast range}, year = {1984}, note = {Symposium was held 7-11 May, 1984.}, pages = {p.265-274}, address = {Honolulu, HI}, keywords = {coastal hazards, erosion, landslides, physical, sediments, Yaquina Bay, Yaquina River, Yaquina River Basin}, author = {Burroughs, E. R. Jr.}, editor = {O{\textquoteright}Loughlin, C. L. and Pearce, A.J.} } @book {82166, title = {Native American religious practices and uses in Western Oregon.}, series = {University of Oregon Anthropological Papers.}, volume = {no.31}, year = {1984}, note = {This publication examines traditional religious practices of Native Americans in Western Oregon. It moves on to address contemporary beliefs and concludes with a survey of religious sites. Formerly available online, a .pdf of this out-of-print publication is available by writing the University of Oregon Museum of Natural and Cultural History. https://mnch.uoregon.edu/uo-anthropological-papers .}, pages = {144 p.}, chapter = {144 p.}, address = {Eugene, Or.}, keywords = {Native Americans, anthropology, religion, Tillamook Indians, Alsea Indians, Yaquina Indians, Coos Indians, Lower Umpqua Indians, Siuslaw Indians, Kalapuya Indians, Cascade Head, Cape Perpetua, Red Ochre Quarry, Cook{\textquoteright}s Chasm, Smith River, Mary{\textquoteright}s Peak,}, author = {Beckham, Stephen Dow and Toepel, Kathryn Ann and Minor, Rick} } @article {31601, title = {Notes on the feeding behavior of gulls and crows at the Yaquina estuary, Oregon}, journal = {Western Birds}, volume = {15}, year = {1984}, month = {1984b}, pages = {p.35-36}, keywords = {American crow=Corvus brachyrhynchos, aquatic invertebrates, biological, birds, community ecology, feeding behavior, gulls=Larus species, molluscs, Nuttall cockle=Clinocardium nuttallii, Pacific littleneck=Leukoma staminea, Yaquina Bay}, url = {https://sora.unm.edu/sites/default/files/journals/wb/v15n01/p0035-p0036.pdf}, author = {Bayer, Range D.} } @article {31606, title = {Oversummering of whimbrels, Bonaparte{\textquoteright}s gulls, and Caspian terns at Yaquina estuary, Oregon}, journal = {The Murrelet}, volume = {65}, year = {1984}, month = {Winter_1984c}, pages = {p.87-90}, keywords = {biological, birds, Bonaparte{\textquoteright}s gull=Larus philadelphia, caspian tern=Sterna caspia, geographical distribution, Idaho Flats, population biology, Sally{\textquoteright}s Bend, temporal distribution, whimbrel=Numenius phaeopus, Yaquina Bay}, author = {Bayer, Range D.} } @article {31611, title = {Vocalizations of great blue herons at Yaquina estuary, Oregon}, journal = {Colonial Waterbirds}, volume = {7}, year = {1984}, month = {1984}, pages = {p.35-44}, keywords = {biological, birds, feeding behavior, great blue heron= Ardea herodias, population biology, Yaquina Bay}, author = {Bayer, Range D.} } @article {31441, title = {Birds associated with California sea lions at Yaquina estuary, Oregon}, journal = {The Murrelet}, volume = {64}, number = {2}, year = {1983}, month = {1983a}, pages = {p.48-51}, keywords = {age composition, biological, birds, Brandt{\textquoteright}s cormorant=Phalacrocorax penicillatus, California sea lion=Zalophus californianus, community ecology, double-crested cormorant=Phalacrocorax auritus, feeding behavior, geographical distribution, glaucous-winged gull=Larus glaucescens, marine mammals, pelagic cormorant=Phalacrocorax pelagicus, red-breasted merganser=Mergus serrator, red-throated loon=Gavia stellata, size composition, temporal distribution, western gull=Larus occidentalis, Yaquina Bay}, author = {Bayer, Range D.} } @article {31456, title = {Effects of temperature, ration, and fish size on growth of juveile black rockfish, Sebastes melanops}, journal = {Environmental Biology of Fishes}, volume = {8}, number = {1}, year = {1983}, month = {1983}, pages = {p.17-28}, keywords = {biological, Black rockfish=Sebastes melanops, developmental stages, growth, life history information, Oregon State University Hatfield Marine Science Center, Yaquina Bay}, author = {Boehlert, George W. and Yoklavich, Mary A.} } @article {31451, title = {Effects of volcanic ash and estuarine sediment on the early life history stages of the Pacific herring, Clupea harengus pallasi}, volume = {no.87}, year = {1983}, note = {The research upon which this report is based was financed in part by the U.S. Department of the Interior, Washington, D.C., under the Mt. St. Helens Research and Development Program.}, month = {10/1983}, pages = {72 p.}, institution = {Water Rsources Research Institute, Oregon State Universtiy}, address = {Corvallis, OR}, keywords = {biological, developmental stages, North Jetty, Oregon State University Hatfield Marine Science Center, Pacific herring=Clupea pallasi, Sally{\textquoteright}s Bend, sediments, toxicity}, url = {https://ir.library.oregonstate.edu/concern/defaults/rj430848h}, author = {Boehlert, George W. and Morgan, John B. and Yoklavich, Mary A.} } @article {31466, title = {Fish or eat bait!}, journal = {Oregon Wildlife}, volume = {38}, number = {6}, year = {1983}, note = {Describes herring fishery in Oregon, including recreational fishery and commercial fishery in Yaquina Bay. "The mature adults generally show in Yauqiina Bay in January, later in the Coos, and even later (April and May) in the Umpqua."}, month = {06/1983}, pages = {p.12-13}, keywords = {Coos Bay, Pacific herring = Clupea pallasi, Winchester Bay, Yaquina Bay}, url = {https://ir.library.oregonstate.edu/concern/technical_reports/xg94hq51s}, author = {Butler, Jerry and Snow, C. Dale} } @article {31471, title = {Heavy metals in estuarine shellfish from Oregon}, journal = {Archives of Environmental Contamination and Toxicology}, volume = {12}, year = {1983}, note = {Good data}, month = {1983}, pages = {p.15-23}, keywords = {Alsea River estuary, aquatic invertebrates, biological, bivalves, cadmium, chemical, Columbia River estuary, Coos River estuary, copper, Coquille River estuary, crustaceans, decapods, dungeness crab=Metacarcinus magister (Cancer magister), heavy metals, iron, manganese, mercury, molluscs, Nehalem River estuary, Nestucca River estuary, Netarts estuary, Nuttall cockle=Clinocardium nuttallii, Salmon River estuary, Siletz River estuary, softshell clam=Mya arenaria, Tillamook estuary, toxicity, Umpqua River estuary, Yaquina Bay, zinc}, author = {Caldwell, Richard S. and Buhler, Donald R.} } @article {31431, title = {Nesting success of western gulls at Yaquina head and on man-made structures in Yaquina estuary, Oregon}, journal = {The Murrelet}, volume = {64}, year = {1983}, month = {Winter_1983a}, pages = {p.87-91}, keywords = {biological, birds, population biology, reproductive behavior, western gull=Larus occidentalis, Yaquina Bay, Yaquina Head}, author = {Bayer, Range D.} } @article {31461, title = {Notes on the marine life of the river lamprey, Lampetra ayresi , in Yaquina Bay, Oregon, and the Columbia River estuary.}, journal = {Fishery Bulletin}, volume = {81}, number = {1}, year = {1983}, month = {1983}, pages = {p.165-167}, keywords = {biological, Columbia River estuary, fishes, geographical distribution, life history information, population biology, river lamprey=Lampetra ayresi, Yaquina Bay}, url = {https://spo.nmfs.noaa.gov/sites/default/files/pdf-content/fish-bull/bond.pdf}, author = {Bond, Carl E. and Kan, Ting T. and Myers, Katherine W.} } @article {31426, title = {Rhythmic locomotor activity in the intertidal shorecrab Hemigrapsus oregonensis (Brachyura: Grapsidae) from the Oregon coast}, journal = {Northwest Science}, volume = {57}, number = {1}, year = {1983}, month = {1983}, pages = {p.49-56}, keywords = {abundance, aquatic invertebrates, biological, Coquille Point, crustaceans, decapods, light, physiology, population biology, tidal currents, vertical distribution, Yaquina Bay, yellow shore crab=Hemigrapsus oregonensis}, author = {Batie, Robert E.} } @article {31436, title = {Seasonal occurances of ten waterbird species at Yaquina estuary, Oregon}, journal = {The Murrelet}, volume = {64}, year = {1983}, month = {Winter_1983c}, pages = {p.78-86}, keywords = {abundance, biological, birds, Brandt{\textquoteright}s cormorant=Phalacrocorax penicillatus, brown pelican=Pelecanus occidentalis, common loon=Gavia immer, common murre=Uria aalge, great egret=Ardea alba, horned grebe=Podiceps auritus, pigeon guillemot=Cephus columba, population biology, red-breasted merganser=Mergus serrator, red-throated loon=Gavia stellata, temporal distribution, western grebe=Aechmophorus occidentalis, Yaquina Bay}, author = {Bayer, Range D.} } @article {31486, title = {Sensitivity of estuarine phytoplankton to hexavalent chromium}, journal = {Estuarine, Coastal and Shelf Science}, volume = {17}, number = {2}, year = {1983}, month = {1983}, pages = {p.181-187}, keywords = {aquatic vegetation, bioassay, biological, chemical, chromium, diatoms, growth, nutrient cycles, physiology, primary production, salinity, Thalassiosira species, toxicity, Trace metals, Yaquina Bay}, author = {Frey, Bruce E. and Riedel, G. Fritz and Bass, Ann E. and Small, Lawrence F.} } @book {31446, title = {Species Profiles : Life Histories and Environmental Requirements of Coastal Fishes and Invertebrates (Pacific Northwest) : Chinook Salmon}, series = {FWS/OBS}, volume = {no.82 (11.6)}, year = {1983}, note = {Good bibliography.}, month = {1983}, pages = {16 p.}, publisher = {U.S. Dept. of the Interior, U.S. Fish and Wildlife Service}, organization = {U.S. Dept. of the Interior, U.S. Fish and Wildlife Service}, address = {Washington, D.C.}, keywords = {Chinook salmon = Oncorhynchus tshawytscha, Coos River, Coquille River, geographic distribution, habitats, life history information, Rogue River, Siletz River, Siuslaw River, taxonomy, turbidity, Umpqua River, water quality, water temperature, Yaquina River}, url = {https://apps.dtic.mil/sti/pdfs/ADA147263.pdf}, author = {Beauchamp, David A. and Shepard, Michael F. and Pauley, Gilbert B. and U.S. Fish and Wildlife Service. Division of Biological Services, and National Coastal Ecosystems Team (U.S.), and U.S. Army Engineer Waterways Experiment Station. Coastal Ecology Group,} } @article {31236, title = {Comparative distribution and habitat preferences of two species of stichaeoid fishes in Yaquina Bay, Oregon.}, journal = {Journal of Experimental Marine Biology and Ecology}, volume = {59}, number = {1}, year = {1982}, month = {1982}, pages = {p.77-87}, keywords = {abundance, biological, developmental stages, fishes, geographical distribution, high cockscomb=Anoplarchus purpurescens, Nute Slough, Saddleback gunnel=Pholis ornata, salinity data, temporal distribution, vertical distribution, Yaquina Bay, Yaquina City}, author = {Barton, Michael G.} } @article {31256, title = {Cultural resource overview of the Siuslaw National Forest, western Oregon}, volume = {7}, number = {1}, year = {1982}, note = {A final report submitted to the Siuslaw National Forest}, month = {1982}, institution = {Heritage Research Associates}, keywords = {Alsea River estuary, general, historical, Siletz River estuary, Yaquina River, Yaquina River Basin}, author = {Beckham, Stephen Dow and Toepel, Kathryn Anne and Minor, Rick} } @article {31271, title = {Final Report: Culture of Selected Larval Marine Fishes}, year = {1982}, note = {80-ABH-00043, 81-ABC-00144}, month = {[1982]}, institution = {[Oregon State University]}, address = {[Newport, Or.]}, keywords = {biological, Black rockfish=Sebastes melanops, developmental stages, fecundity, growth, Oregon State University Hatfield Marine Science Center, sablefish=Anoplopoma fimbria, widow rockfish=Sebastes entomelas}, author = {Boehlert, George W. and Yoklavich, Mary A.} } @article {31251, title = {Great blue heron eggshell thickness at Oregon estuaries}, journal = {Wilson Bulletin}, volume = {94}, number = {2}, year = {1982}, month = {1982}, pages = {p.198-201}, keywords = {Alsea River estuary, biological, birds, brown pelican=Pelecanus occidentalis, Coos River estuary, Coquille River estuary, great blue heron= Ardea herodias, pesticides, Yaquina Bay}, url = {https://sora.unm.edu/sites/default/files/journals/wilson/v094n02/p0198-p0201.pdf}, author = {Bayer, Range D.} } @article {31246, title = {How important are bird colonies as information centers?}, journal = {Auk}, volume = {99}, year = {1982}, month = {1982b}, pages = {p.31-40}, keywords = {biological, birds, feeding behavior, general, geographical distribution, population biology, reproductive behavior, temporal distribution}, url = {https://sora.unm.edu/sites/default/files/journals/auk/v099n01/p0031-p0040.pdf}, author = {Bayer, Range D.} } @inbook {31261, title = {Ontogenetic changes in growth and their relationship with temperature and habitat changes}, booktitle = {WASHU-WO}, series = {Gutshop {\textquoteright}81: Fish Food Habits Studies :Pproceedings of the Third Pacific Workshop, December 6-9, 1981, Asilomar Conference Center, Pacific Grove, California}, volume = {no.82-2}, year = {1982}, pages = {p.115-123}, publisher = {Washington Sea Grant College Program}, organization = {Washington Sea Grant College Program}, address = {Seattle, WA}, keywords = {biological, Black rockfish=Sebastes melanops, developmental stages, growth, Oregon State University Hatfield Marine Science Center, splitnose rockfish=Sebastes diploproa, Yaquina Bay}, url = {https://repository.library.noaa.gov/view/noaa/39580}, author = {Boehlert, George W.}, editor = {Cailliet, Gregor M. and Simenstad, Charles A. (eds.)} } @article {31241, title = {Population structure of the crab Hemigrapsus oregonensis (Brachyura, Grapsidae) in Yaquina Bay estuary, Oregon. II. Vertical distribution, biomass, and production}, journal = {Northwest Science}, volume = {56}, number = {3}, year = {1982}, month = {1982}, pages = {p.241-249}, keywords = {abundance, aquatic invertebrates, biological, Coquille Point, crustaceans, decapods, population biology, vertical distribution, Yaquina Bay, yellow shore crab=Hemigrapsus oregonensis}, author = {Batie, Robert E.} } @article {31391, title = {The spawning season of four species of clams in Oregon}, journal = {Journal of Shellfish Research}, volume = {2}, number = {1}, year = {1982}, month = {June_1982}, pages = {55-57}, keywords = {aquatic invertebrates, biological, bivalves, butter clam=Saxidomus giganteus, fat gaper=Tresus capax, life history information, molluscs, Oregon State University Hatfield Marine Science Center, Pacific littleneck=Leukoma staminea, physiology, reproductive behavior, Tillamook estuary, Yaquina Bay}, author = {Robinson, Anja M. and Breese, Wilbur P.} } @article {31366, title = {Straying by hatchery-reared coho salmon released in Yaquina Bay, Oregon}, volume = {no.82-6}, year = {1982}, month = {October_1982}, pages = {22 p.}, institution = {Oregon Department of Fish and Wildlife}, address = {[Portland, Or.]}, keywords = {Big Elk Creek, biological, coho salmon=Oncorhynchus kisutch, hatchery salmonids, Lower Yaquina River, Oregon Aqua-Foods, Upper Yaquina River, Yaquina Bay}, url = {https://digital.osl.state.or.us/islandora/object/osl\%3A18314}, author = {Nicholas, J. W. and Van Dyke, Lisa and Buckman, Robert C. and Fish Division, Oregon. Dept. of Fish and Wildlife,} } @article {31071, title = {Arrival and departure frequencies of great blue herons at two Oregon estuarine colonies}, journal = {Auk}, volume = {98}, year = {1981}, month = {July_1981}, pages = {p.589-595}, keywords = {biological, birds, Coos River estuary, great blue heron= Ardea herodias, population biology, Yaquina Bay}, url = {https://sora.unm.edu/sites/default/files/journals/auk/v098n03/p0589-p0595.pdf}, author = {Bayer, Range D.} } @article {31076, title = {California sea lions in the Yaquina River estuary, Oregon}, journal = {The Murrelet}, volume = {62}, year = {1981}, month = {1981}, pages = {p.56-59}, keywords = {abundance, biological, California sea lion=Zalophus californianus, hatchery salmonids, Idaho Flats, marine mammals, population biology, Sally{\textquoteright}s Bend, temporal distribution, Yaquina Bay}, author = {Bayer, Range D.} } @article {31091, title = {Colony sizes and hatching synchrony of great blue herons in coastal Oregon}, journal = {The Murrelet}, volume = {62}, year = {1981}, month = {Winter_1981}, pages = {p.73-79}, keywords = {Alsea River estuary, biological, birds, Coos River estuary, great blue heron= Ardea herodias, population biology, reproductive behavior, Yaquina Bay}, author = {Bayer, Range D. and McMahon, Ellen} } @article {31081, title = {Shallow-water intertidal ichthyofauna of the Yaquina estuary, Oregon}, journal = {Northwest Science}, volume = {55}, year = {1981}, month = {1981}, pages = {p.182-193}, keywords = {abundance, aquatic vegetation, bay pipefish=Syngnathus leptorhynchus, biological, community ecology, eelgrass=Zostera marina, fishes, geographical distribution, grasses, Idaho Flats, Marine Science Center Dock, Pacific staghorn sculpin=Leptocottus armatus, shiner perch=Cymatogaster aggregata, size composition, snake prickleback=Lumpenus sagitta, temporal distribution, tidal currents, tube-snout=Aulorhynchus flavidus, Yaquina Bay, zonal distribution}, author = {Bayer, Range D.} } @article {31086, title = {Weights of great blue herons at the Yaquina estuary, Oregon}, journal = {The Murrelet}, volume = {62}, year = {1981}, month = {Spring_1981}, pages = {p.18-19}, keywords = {biological, birds, great blue heron= Ardea herodias, population biology, Yaquina Bay}, author = {Bayer, Range D.} } @article {30886, title = {Birds feeding on herring eggs at the Yaquina estuary, Oregon}, journal = {Condor}, volume = {82}, number = {2}, year = {1980}, month = {May_1980a}, pages = {p.193-198}, keywords = {biological, birds, community ecology, feeding behavior, fishes, Pacific herring=Clupea pallasi, Yaquina Bay}, url = {https://sora.unm.edu/sites/default/files/journals/condor/v082n02/p0193-p0198.pdf}, author = {Bayer, Range D.} } @article {30946, title = {Broodstock management of Crassostrea gigas: II. Broodstock conditioning to maximize larval survival}, journal = {Aquaculture}, volume = {21}, number = {4}, year = {1980}, month = {1980}, pages = {p.336-345}, keywords = {aquaculture, biological, genetics, Oregon State University Hatfield Marine Science Center, Pacific oyster=Crassostrea gigas}, author = {Lannan, James E. Jr. and Robinson, Anja M. and Breese, Wilbur P.} } @article {30971, title = {Cultural resource overview of BLM lands in northwestern Oregon : archaeology, ethnography, history}, volume = {no.20}, year = {1980}, note = {Good resource on prehistoric and historic culture of the region. Yaquina and Alsea peoples are grouped together (p.65-71), with more emphasis on the Alsea. A .pdf of this volume is available. Email mnchaccounting@uoregon.edu for access. }, pages = {198 p.}, institution = {University of Oregon. Dept. of Anthropology}, address = {Eugene, Or.}, keywords = {Alsea River, anthropology, archeology, historical, Native Americans, Salmon River, Tillamook Bay, Yaquina River}, author = {Minor, Rick and Beckham, Stephen Dow and Lancefield-Steeves, Phyllis E. and Toepel, Kathryn Anne}, editor = {Aikens, C. Melvin} } @article {30891, title = {An evaluation of the Oregon Department of Fish and Wildlife Standard Spawning Fish Suvery System for coho salmon}, volume = {no. 80-9}, year = {1980}, month = {December_1980}, pages = {24 p.}, institution = {Oregon Department of Fish and Wildlife}, address = {[Portland, Or.]}, keywords = {biological, coho salmon=Oncorhynchus kisutch, Yaquina Bay, Yaquina River, Yaquina River Basin}, url = {https://nrimp.dfw.state.or.us/DataClearinghouse/default.aspx?pn=ViewFile\&att=ODFW/ODFW_1589_2_80-9.pdf}, author = {Beidler, W. M. and Nickelson, T. E. and Oregon. Dept. of Fish and Wildlife. Fish Division,} } @article {30896, title = {Growth and reproduction of subtidal and intertidal populations of the gaper clam Tresus capax (Gould) from Yaquina Bay, Oregon}, journal = {Proceedings - National Shellfisheries Association}, volume = {70}, number = {1}, year = {1980}, month = {June_1980}, pages = {p.1-13}, keywords = {biological, Coast Guard Station, developmental stages, fat gaper=Tresus capax, growth, life history information, McLean Point, Sally{\textquoteright}s Bend, Sawyer{\textquoteright}s Landing, Yaquina Bay}, author = {Breed-Willeke, G.M. and Hancock, D. R.} } @article {24426, title = {Oregon shrimp fishery, 1979}, volume = {no. 80-1}, year = {1980}, note = {Extensive statistical tables.}, pages = {12 p.}, institution = {Oregon Dept. of Fish and Wildlife}, address = {[Portland, Or.]}, keywords = {aquatic invertebrates, biological, catch statistics, Chetco River estuary, Columbia River estuary, commercial fisheries - shellfish, Coos River estuary, Coquille River estuary, crustaceans, decapods, economics, general, pink shrimp = Pandalus jordani, Port of Garibaldi, Port of Newport, Port Orford, Rogue River estuary, Tillamook estuary, Umpqua River estuary, Winchester Bay, Yaquina Bay}, url = {https://ir.library.oregonstate.edu/concern/technical_reports/1r66j1904}, author = {Bruneau, Connie and Oregon. Department of Fish and Wildlife,} } @conference {31031, title = {Recovery of the macrobenthos at a dredge site in Yaquina Bay, Oregon}, booktitle = {Contaminants and Sediments}, volume = {2}, year = {1980}, month = {1980}, pages = {p.391-408}, publisher = {Ann Arbor Science}, organization = {Ann Arbor Science}, address = {Ann Arbor, Mich.}, keywords = {biological, community ecology, dredging, ecological succession, human impacts, physical, physical modifications, sediments, Yaquina Bay}, author = {Swartz, Richard C. and DeBen, Waldemar A. and Cole, Faith A. and Bentsen, L.C.} } @article {30871, title = {Size and age of the tubesnout (Aulorhynchus flavidus) in the Yaquina estuary}, journal = {Northwest Science}, volume = {54}, number = {4}, year = {1980}, month = {1980c}, pages = {p.306-310}, keywords = {age composition, aquatic vegetation, biological, eelgrass=Zostera marina, fishes, geographical distribution, grasses, life history information, population biology, size composition, temporal distribution, tube-snout=Aulorhynchus flavidus, Yaquina Bay}, author = {Bayer, Range D.} } @article {30876, title = {Size, seasonality, and sex ratios of the bay pipefish (Syngnathus leptorhynchus) in Oregon}, journal = {Northwest Science}, volume = {54}, number = {3}, year = {1980}, month = {1980}, pages = {p.161-167}, keywords = {aquatic vegetation, bay pipefish=Syngnathus leptorhynchus, biological, eelgrass=Zostera marina, fishes, grasses, life history information, population biology, reproductive behavior, sex ratio, size composition, temporal distribution, Yaquina Bay}, author = {Bayer, Range D.} } @article {30881, title = {Social differences in defecation behavior of great blue herons (Ardea herodias)}, journal = {Auk}, volume = {97}, year = {1980}, month = {1980}, pages = {p.900-901}, keywords = {biological, birds, great blue heron= Ardea herodias, population biology, territoriality, Yaquina Bay}, url = {https://sora.unm.edu/sites/default/files/journals/auk/v097n04/p0900-p0901.pdf}, author = {Bayer, Range D.} } @article {30666, title = {Bald eagle-great blue heron interactions}, journal = {The Murrelet}, volume = {60}, year = {1979}, month = {Spring_1979}, pages = {p.32-33}, keywords = {bald eagle=Haliaeetus leucocephalus, biological, birds, community ecology, Coos River estuary, feeding behavior, great blue heron= Ardea herodias, Pacific staghorn sculpin=Leptocottus armatus, red-tailed hawk=Buteo jamaicensis, starry flounder=Platichthys stellatus, territoriality, Yaquina Bay}, author = {Bayer, Range D.} } @book {51236, title = {Critical Species and Habitats of Oregon{\textquoteright}s Coastal Beaches and Dunes}, year = {1979}, note = {Estuaries as well as the outer coast are considered in this report. Includes line drawings of rare species, maps showing critical habitat.}, pages = {91 p.}, publisher = {Oregon Coastal Zone Management Association}, organization = {Oregon Coastal Zone Management Association}, address = {Newport, Or.}, keywords = {Bayocean Spit, Big Creek, birds, Clatsop County, Coos Bay, Coquille River, Daley Lake, depleted populations, endangered species, Euchre Creek, habitats, Henderson Creek, Lily Lake, Myers Creek, natural resource management, Netarts Bay, Netarts Spit, New River, North Spit Umpqua River, Rock Creek, Saltmarsh bird{\textquoteright}s beak = Cordylanthus maritimus Nutt. ssp. palustris, Sandlake estuary, Seal Rock, Siltcoos River estuary, Snowy plover = Charadrius nivosus, South Beach, Tahkenitch Spit, Tenmile Creek, terrestrial vegetation, Tillamook Bay, Umpqua River, Yaquina River}, url = {https://www.govinfo.gov/content/pkg/CZIC-ql88-b85-1979/pdf/CZIC-ql88-b85-1979.pdf}, author = {Burley, Bill and Oregon Coastal Zone Management Association}, editor = {Fitzpatrick, Kathy Bridges} } @conference {30696, title = {Eyed larvae and the oyster grower}, booktitle = {Proceedings of the National Shellfish Association}, volume = {69}, year = {1979}, note = {Abstract only}, pages = {p.202-203}, keywords = {aquaculture, aquatic invertebrates, biological, bivalves, developmental stages, life history information, molluscs, Oregon State University Hatfield Marine Science Center, physiology, population biology, reproductive behavior, Yaquina Bay}, author = {Breese, Wilbur P.} } @article {30671, title = {Great blue heron attacks horned grebe}, journal = {Bird-Banding: A Journal of Ornithological Investigation}, volume = {50}, number = {3}, year = {1979}, month = {1979}, pages = {p.264-265}, keywords = {biological, birds, community ecology, great blue heron=Ardea herodias, horned grebe=Podiceps auritus, Yaquina Bay}, author = {Bayer, Range D.} } @article {30691, title = {Habitat Classification and Inventory Methods for the Management of Oregon Estuaries. Final Report: Estuary Inventory Project}, volume = {1}, year = {1979}, month = {1979}, institution = {Oregon Department of Fish and Wildlife}, address = {Portland, Or.}, keywords = {Alsea River estuary, biological, Chetco River estuary, Coos River estuary, Coquille River estuary, environmental policy and law, general, habitats, hydrology, natural resource management, Necanicum River estuary, Nehalem River estuary, Nestucca River estuary, Netarts estuary, physical, Rogue River estuary, Salmon River Estuary, Sand Lake Estuary, Siletz River estuary, Siuslaw River estuary, Tillamook estuary, Umpqua River estuary, Yaquina Bay}, url = {https://ir.library.oregonstate.edu/concern/defaults/fx719s684}, author = {Bottom, Daniel L. and Kreag, Becky and Ratti, Frank and Roye, Cyndi and Starr, Rick and Oregon. Dept. of Fish and Wildlife. Research and Development Sectiom, and Oregon. Land Conservation and Development Commission,} } @mastersthesis {30686, title = {Heart Rate, Survivorship, Oxygen Consumption, and Metabolic end Product Accumulations in the Intertidal Limpets Collisella pelta and Collisella digitalis in Relation to Desiccation and Hypoxia}, year = {1979}, note = {Major professor was Austin Pritchard. }, month = {1979}, pages = {42 p.}, school = {Oregon State University}, type = {Doctoral Dissertation}, edition = {Ph. D.}, chapter = {Dept. of Zoology}, address = {Corvallis, Or.}, keywords = {behavior, biological, life history information, Oregon State University Hatfield Marine Science Center, RIbbed limpet=Collisella digitalis, Shield limpet=Collisella pelta, theses, Yaquina Head}, url = {https://ir.library.oregonstate.edu/concern/graduate_thesis_or_dissertations/n009w448c}, author = {Boese, Bruce L.} } @article {30676, title = {Intertidal Shallow-Water Fishes and Selected Macroinvertebrates in the Yaquina Estuary, Oregon}, year = {1979}, note = {Unpublished manuscript}, month = {August_1979}, keywords = {abundance, aquatic invertebrates, aquatic vegetation, bay pipefish=Syngnathus leptorhynchus, Center Slough, cnidarians, community ecology, crustaceans, ctenophores, decapods, dungeness crab=Metacarcinus magister (Cancer magister), eelgrass=Zostera marina, English sole=Pleuronectes vetulus, fishes, geographical distribution, growth, hermit crab=Pagurus species, Idaho Flats, ife history information, lingcod=Ophiodon elongatus, Marine Science Center Dock, northern kelp crab=Pugettia producta, Pacific herring=Clupea pallasi, Pacific salmonids=Oncorhynchus spp., Pacific staghorn sculpin=Leptocottus armatus, pile perch=Rhacochilus vacca, population biology, Red rock crab=Cancer productus, sex ratio, shiner perch=Cymatogaster aggregata, starry flounder=Platichthys stellatus, temporal distribution, threespine stickleback=Gasterosteus aculeatus, tidepool sculpin=Oligocottus maculosus, Yaquina Bay, yellow shore crab=Hemigrapsus oregonensis}, author = {Bayer, Range D.} } @article {30681, title = {Intertidal zonation of Zostera marina in the Yaquina estuary, Oregon}, journal = {Syesis}, volume = {12}, year = {1979}, month = {November_1979}, pages = {p.147-154}, keywords = {aquatic vegetation, biological, birds, black brant=Branta bernicla nigricans, Center Slough, community ecology, eelgrass=Zostera japonica, eelgrass=Zostera marina, geographical distribution, grasses, Idaho Flats, Lower Yaquina River, Marine Science Center Dock, Oneatta Point, Sally{\textquoteright}s Bend, Sally{\textquoteright}s Slough, temporal distribution, Yaquina Bay, zonal distribution}, author = {Bayer, Range D.} } @article {30701, title = {Structure and life cycle of Trypanoplasma beckeri sp. n. (Kineoplastidae), a parasite of the cabezon, Scorpaenichthys marmoratus, in Oregon waters}, journal = {Journal of Protozoology}, volume = {26}, number = {3}, year = {1979}, month = {1979}, pages = {p.343-347}, keywords = {biological, cabezon=Scorpaenichthys marmoratus, fish disease, fishes, leeches, life history information, Malmiana species, Oregon State University Hatfield Marine Science Center, parasites, physiology, Trypanoplasma beckeri, Yaquina Bay}, author = {Burreson, Eugene M.} } @article {30706, title = {Toxicity of the herbicides 2,4 D, DEF, Propanil and Trifluralin to the Dungeness crab, Cancer magister}, journal = {Archives of Environmental Contamination and Toxicology}, volume = {8}, year = {1979}, month = {1979}, pages = {383-396}, keywords = {biological, chemical, dungeness crab=Metacarcinus magister (Cancer magister), herbicides, Oregon State University Hatfield Marine Science Center, toxicity}, author = {Caldwell, Richard S. and Buchanan, David V. and Armstrong, David A. and Mallon, Michael H. and Raymond E Millemann} } @inbook {30471, title = {Aspects of an Oregon estuarine great blue heron population}, booktitle = {Wading Birds. National Audobon Society}, series = {Research report of the National Audubon Society}, volume = {no. 7}, year = {1978}, month = {1978}, pages = {p.213-217}, keywords = {abundance, biological, birds, feeding behavior, great blue heron= Ardea herodias, population biology, temporal distribution, Yaquina Bay}, author = {Bayer, Range D.} } @book {30481, title = {Field Guide to Common Marine and Bay Fishes of Oregon}, year = {1978}, month = {1978}, pages = {27 p.}, publisher = {Oregon State University Extension Service}, organization = {Oregon State University Extension Service}, address = {Corvallis, Or.}, keywords = {fishes, general}, url = {https://ir.library.oregonstate.edu/concern/administrative_report_or_publications/db78tc719}, author = {Bond, Carl E. and Beardsley, Alan J.} } @mastersthesis {30466, title = {Influence of Temperature and Salinity on the Adaptation of Anoplarchus purpurescens and Pholis ornata to an Intertidal Habitat}, year = {1978}, note = {Major professor was Carl Bond. }, month = {April_1978}, pages = {105 p.}, school = {Oregon State University}, type = {Doctoral Dissertation}, edition = {Ph. D.}, chapter = {Dept. of Fisheries and Wildlife}, address = {Corvallis, Or.}, keywords = {biological, community ecology, estuarine dynamics, fishes, geographical distribution, high cockscomb=Anoplarchus purpurescens, hydrology, Lower Yaquina River, physical, physiology, River mile 10, Saddleback gunnel=Pholis ornata, salinity, Sawyer{\textquoteright}s Landing, theses, water temperature, Yaquina Bay, Yaquina Bay Bridge}, url = {https://ir.library.oregonstate.edu/concern/graduate_thesis_or_dissertations/k0698b16s}, author = {Barton, Michael G.} } @article {30476, title = {Intertidal Zonation of Two Zostera species at the Yaquina Estuary, Oregon}, year = {1978}, note = {Draft of published article in Syesis v.12}, month = {November_1978}, keywords = {aquatic vegetation, biological, birds, black brant=Branta bernicla nigricans, Center Slough, community ecology, eelgrass=Zostera japonica, eelgrass=Zostera marina, geographical distribution, grasses, Idaho Flats, Lower Yaquina River, Marine Science Center Dock, Oneatta Point, Sally{\textquoteright}s Bend, Sally{\textquoteright}s Slough, temporal distribution, Yaquina Bay, zonal distribution}, author = {Bayer, Range D.} } @article {30506, title = {Transition Zone Vegetation between Intertidal Marsh and Upland in Oregon and Washington}, year = {1978}, note = {A report prepared for the U.S. Environmental Protection Agency under grant no. R804963-01}, month = {August_1978}, pages = {77 p.}, institution = {Geography Department, Oregon State University}, address = {Corvallis, Or.}, keywords = {abundance, Alsea River estuary, aquatic vegetation, biological, community ecology, Coos River estuary, Coquille River estuary, environmental policy and law, natural resource management, Nehalem River estuary, Netarts estuary, Nute Slough, species list, terrestrial vegetation, wetland delineation, wetland vegetation, Yaquina Bay, zonal distribution}, author = {Frenkel, Robert E. and Boss, Theodore and Schuller, S. Reid} } @mastersthesis {30211, title = {Biology of the Genus Eohaustorius (Amphipoda: Haustoriidae) on the Oregon Coast}, year = {1977}, note = {Major professor was Jefferson J. Gonor.}, pages = {207 p.}, school = {Oregon State University}, type = {Doctoral Dissertation}, edition = {Ph. D.}, chapter = {Dept. of Zoology}, address = {Corvallis, Or.}, keywords = {amphipods, aquatic invertebrates, biological, crustaceans, Eohaustorius species, life history information, physiology, population biology, theses, Yaquina Bay}, url = {https://ir.library.oregonstate.edu/concern/graduate_thesis_or_dissertations/3f4628563}, author = {Bosworth Jr., Weldon S.} } @mastersthesis {30216, title = {Biology of the Microsporidan Parasite, Pleistophora sp., in Three Species of Crangonid Sand Shrimp}, year = {1977}, note = {A common parasite of sand shrimp, Pleistophora species, was examined in Yaquina Bay. The parasite infects skeletal muscle tissue in the shrimp. The seasonal prevalence and intensity of the infection was noted. Discusses aspects of the biology of this parasite and its effect on the sand shrimp. BW photographs of slides. Major professor was Dr. Robert E. Olson. }, month = {1977}, pages = {62 p.}, school = {Oregon State University}, type = {Masters Thesis}, edition = {M.S.}, chapter = {Dept. of Zoology}, address = {Corvallis, Or.}, keywords = {biological, blacktail bay shrimp=Crangon nigricauda, California bay shrimp=Crangon franciscorum, crustaceans, decapods, Idaho Flats, life history information, Marine Science Center Dock, parasites, physiology, Pleistophora species, shellfish disease, smooth bay shrimp=Lissocrangon stylirostris, theses, Yaquina Bay}, url = {https://ir.library.oregonstate.edu/concern/graduate_thesis_or_dissertations/6h440x13v}, author = {Breed, Gail M.} } @article {30221, title = {Biology of the microsporidian parasite Pleistophora crangoni n. sp. in three species of crangonid sand shrimps}, journal = {Journal of Invertebrate Pathology}, volume = {30}, year = {1977}, month = {1977}, pages = {p.387-405}, keywords = {biological, blackspotted bay shrimp=Crangon nigromaculata, blacktail bay shrimp=Crangon nigricauda, California bay shrimp=Crangon franciscorum, crustaceans, decapods, Idaho Flats, Marine Science Center Dock, parasites, physiology, Pleistophora species, shellfish disease, smooth bay shrimp=Lissocrangon stylirostris, Yaquina Bay}, author = {Breed, Gail M. and Olson, Robert E.} } @article {30206, title = {Biology of the Redtail Surfperch (Amphistichus rhodoterus) from the Central Oregon Coast}, volume = {no.90}, year = {1977}, note = {Redtail surfperch live in the Oregon surf zone from October through March, and are found in bays from April through September. The authors studied the fish in Alsea and Yaquina Bays and the surf zone between the two estuaries. Gives some life history information. Emphasis is on reproductive biology. Also looked at food, particularly in the surf zone, and parasites. Recommended promoting a surf fishery, but thought the species was vulnerable to overexploitation in estuaries. }, pages = {23 p.}, address = {Washington, D.C.}, keywords = {Alsea Bay, biology, life history information, recreational fisheries, redtail surf perch = Amphistichus rhodoterus, Yaquina Bay}, url = {https://babel.hathitrust.org/cgi/pt?id=uc1.31822006841605\&view=1up\&seq=461}, author = {Bennett, Donald E. and Wydoski, Richard S.} } @article {30201, title = {Birds of Lincoln County, Oregon}, year = {1977}, note = {"Range Bayer, editor ; Sally Booth, illustrator ; prepared by Yaquina Birders." Gives directions to local birding areas, a checklist of Lincoln County birds, lists accidental and offshore species, and gives arrival and departure dates.}, month = {1977}, pages = {19 p.}, institution = {Sea Grant Marine Advisory Program}, address = {Newport, Or.}, keywords = {abundance, Beaver Creek estuary, Big Elk Creek, biological, birds, Chitwood, community ecology, general ecosystem description, Idaho Flats, King Slough, Sally{\textquoteright}s Bend, South Jetty, species list, temporal distribution, Yaquina Bay, Yaquina Head}, url = {https://ir.library.oregonstate.edu/concern/technical_reports/gt54kn398}, author = {Bayer, Range D. and Yaquina Birders} } @conference {30331, title = {Food consumption and growth of larvae of the Pacific oyster, Crassostrea gigas (Thunberg) in a constant flow rearing system}, booktitle = {Proceedings of the National Shellfisheries Association}, volume = {67}, year = {1977}, month = {June_1977}, pages = {p.7-16}, publisher = {National Shellfisheries Association}, organization = {National Shellfisheries Association}, keywords = {aquaculture, biological, developmental stages, growth, Oregon State University Hatfield Marine Science Center, Pacific oyster=Crassostrea gigas}, author = {Malouf, Robert E. and Breese, Wilbur P.} } @article {30236, title = {Hatchery rearing techniques for the oyster Crassostrea rivularis Gould}, journal = {Aquaculture}, volume = {12}, number = {2}, year = {1977}, month = {1977}, pages = {p.123-126}, keywords = {aquaculture, biological, Oregon State University Hatfield Marine Science Center, Suminoe oyster=Crassostrea ariakensis}, author = {Breese, Wilbur P. and Malouf, Robert E.} } @article {30231, title = {Out-bay growth experiment for the Pacific oyster, Crassostrea gigas (Thunberg)}, volume = {no.4540}, year = {1977}, month = {[1977]}, address = {Newport, Or.}, keywords = {aquaculture, biological, Oregon State University Hatfield Marine Science Center, Pacific oyster=Crassostrea gigas}, author = {Breese, Wilbur P. and Malouf, Robert E.} } @article {30226, title = {Oysters in the Pacific Northwest}, journal = {Marine Fisheries Review}, volume = {39}, number = {7}, year = {1977}, month = {July_1977}, pages = {p.17}, keywords = {aquaculture, biological, general, molluscs, Pacific oyster=Crassostrea gigas}, url = {https://spo.nmfs.noaa.gov/content/oysters-pacific-northwest}, author = {Breese, Wilbur P.} } @article {30326, title = {Seasonal changes in the effects of temperature and water flow rate on the growth of juvenile Pacific oysters, Crassostreea gigas (Thunberg)}, journal = {Aquaculture}, volume = {12}, number = {1}, year = {1977}, month = {September_1977}, pages = {p.1-13}, keywords = {aquaculture, aquatic invertebrates, bivalves, developmental stages, growth, hydrology, introduced species, life history information, mathematical modeling, molluscs, nitrogen, Oregon State University Hatfield Marine Science Center, organic carbon, Pacific oyster=Crassostrea gigas, physiology, water temperature, Yaquina Bay}, author = {Malouf, Robert E. and Breese, Wilbur P.} } @article {30241, title = {Two new species of Malmiana (Hirudinea: Piscicolidae) from Oregon coastal waters}, journal = {Journal of Parasitology}, volume = {63}, number = {1}, year = {1977}, note = {"Malmiana virida sp. n., parasitic on buffalo sculpins, Enophrys bison, in Yaquina Bay estuary, and Malmiana diminuta sp. n., a parasite of rockfishes, Sebastes spp., and cabezon, Scorpaenichthys marmoratus, are described." (from the Abstract). Note: initial species names were not the final approved names for these new species. For more information, see World Register of Marine Species ( https://www.marinespecies.org/ ).}, pages = {p.130-136}, keywords = {annelids, buffalo sculpin = Enophrys bison, cabezon = Scorpaenichthys marmoratus, fish, Janusion diminuta (Malmiana diminuta), Janusion virida (Malmiana virida), new species description, parasites, Rockfish = Sebastes spp.}, author = {Burreson, E. M.} } @article {30021, title = {The Archeological Reconnaissance of the Proposed Newport to Waldport and Waldport to Yachats Sewer Systems, Lincoln County, Oregon}, year = {1976}, month = {1976}, pages = {6 p.}, institution = {Anthropology Department, Oregon State University}, address = {Corvallis, OR}, keywords = {Alsea River estuary, general, historical, Yachats River estuary, Yaquina Bay}, author = {Brauner, David R.} } @article {30036, title = {Aestabdella Gen. N. (Hirudinea: Piscicolidae) for Johanassonia abditovesiculata Moore 1952 and Ichthyobdella platycephali Ingram 1957.}, journal = {Journal of Parasitology}, volume = {62}, number = {5}, year = {1976}, month = {October_1976}, pages = {p.789-792}, keywords = {Aestabdella species, biological, fishes, geographical distribution, leeches, Lower Yaquina River, new species description, Pacific staghorn sculpin=Leptocottus armatus, parasites, physiology, taxonomy, temporal distribution, Yaquina Bay}, author = {Burreson, Eugene M.} } @article {30041, title = {Trachelobdella oregonesis sp. n. (Hirudinea: Piscicolidae), parasitic on the cabezon Scorpaenichthys marmoratus (Ayres), in Oregon}, journal = {Journal of Parasitology}, volume = {62}, number = {5}, year = {1976}, month = {October_1976}, pages = {p.793-798}, keywords = {aquatic invertebrates, biological, cabezon=Scorpaenichthys marmoratus, fishes, leeches, life history information, new species description, parasites, physiology, Trachelobdella oregonesis, Yaquina Bay}, author = {Burreson, Eugene M.} } @conference {30026, title = {Out-bay culture of bivalve molluscs}, booktitle = {Proceedings of the National Shellfisheries Association}, volume = {v.65}, year = {1976}, pages = {p.76-77}, publisher = {National Shellfisheries Association}, organization = {National Shellfisheries Association}, keywords = {aquaculture, biological, Oregon State University Hatfield Marine Science Center, Pacific oyster=Crassostrea gigas}, author = {Breese, Wilbur P.} } @article {36641, title = {Pleasure boating in Oregon : a report to the Oregon State Marine Board}, volume = {no.42}, year = {1976}, note = {This report summarizes the status of recreational boating in Oregon circa 1975. The Willamette and Columbia Rivers were the most heavily used waterways in the state. Most pleasure boats were used for recreational fishing, with waterskiing and cruising as other major activities. The size of pleasure boats was increasing. Problems included overcrowding at boating facilities, a lack of law enforcement, and a need for more public restrooms.}, pages = {73 p.}, institution = {Oregon State University. Water Resources Research Institute}, address = {Corvallis, Or.}, keywords = {Alsea River, Devils Lake, Diamond Lake, recreational fisheries, Siletz River, Siuslaw River, tourism, Umpqua River, Yaquina Bay}, url = {https://ir.library.oregonstate.edu/concern/defaults/76537521k}, author = {Pfister, Robert E. and Donheffner, Paul E. and Hartsook, Thomas Edward and Oregon. State Marine Board} } @article {30016, title = {Toxicity of the insecticide Methoxychlor to the Dungeness crab, Cancer magister.}, journal = {Marine Biology}, volume = {38}, year = {1976}, month = {1976}, pages = {p.239-252}, keywords = {biological, chemical, developmental stages, dungeness crab=Metacarcinus magister (Cancer magister), herbicides, Oregon State University Hatfield Marine Science Center, toxicity}, author = {Armstrong, David A. and Buchanan, David V. and Mallon, Michael H. and Caldwell, Richard S. and Raymond E Millemann} } @article {30031, title = {The Use of Heated Seawater for Farming Oysters and Salmon}, year = {1976}, note = {For oysters, "The objective of these studies was to determine the biological feasibility of using the heated effluent from coastal nuclear power plants for culturing the Pacific oyster, Crassostrea gigas." (p.1) Work included oyster growth experiments, seasonal growth experiments and closed system studies. For salmon, "The objective of these studies was to determine the biological feasibility of using the heated effluent from coastal nuclear power plants for culturing chum salmon, Oncorhynchus keta, and, to a lesser extent, pink salmon 0. gorbuscha." (p.3) Work included temperature vs. growth experiments, temperature x ration factorial experiments, and disease control studies.}, month = {January 23_1976}, pages = {67 p.}, institution = {Oregon State University. Department of Fisheries and Wildlife}, address = {Corvallis, Or.}, keywords = {aquaculture, biological, chum salmon=Oncorhynchus keta, life history information, Oregon State University Hatfield Marine Science Center, Pacific oyster=Crassostrea gigas, pink salmon=Oncorhynchus gorbuscha, water temperature}, url = {https://ir.library.oregonstate.edu/concern/technical_reports/cj82k818m}, author = {Breese, Wilbur P. and Oregon State University. Department of Fisheries and Wildlife} } @mastersthesis {29806, title = {The Activity Pattern of Diadora aspera}, year = {1975}, note = {Major professor was James McCauley. }, month = {1975}, pages = {38 p.}, school = {Oregon State University}, type = {Masters Thesis}, edition = {M.S.}, chapter = {School of Oceanography}, address = {Corvallis, Or.}, keywords = {aquatic invertebrates, behavior, biological, Keyhole limpet = Diadora aspera, molluscs, Oregon State University Hatfield Marine Science Center, theses, Yaquina Head}, url = {https://ir.library.oregonstate.edu/concern/graduate_thesis_or_dissertations/5999n573s}, author = {Boese, Bruce L.} } @article {29871, title = {Biochemical polymorphism of starry flounder, Platichthys stellatus, from the northwestern and northeastern Pacific Ocean}, journal = {Animal Blood Groups and Biochemical Genetics}, volume = {6}, number = {1}, year = {1975}, note = { }, pages = {p.9-18}, keywords = {biochemistry, genetics, Hokkaido Island, Kamchatka, morphology, Puget Sound, Starry flounder = Platichthys stellatus, Yaquina Bay}, author = {Johnson, A. G. and Beardsley, A. J.} } @mastersthesis {29816, title = {Biological Studies on the Hemoflagellates of Oregon Marine Fishes and Their Potential Leech Vectors}, year = {1975}, note = {Includes electron micrograph and excellent line drawings. Although the author notes where leeches were found in Yaquina Bay, all infected fish were found in the ocean: no fish collected from Yaquina Bay were found to be infected with hemoflagellates. Major professor was Dr. Robert E. Olson. }, month = {April_1975}, pages = {134 p.}, school = {Oregon State University}, type = {Doctoral Dissertation}, edition = {Ph. D.}, chapter = {Dept. of Zoology}, address = {Corvallis, Or.}, keywords = {aquatic invertebrates, biological, Coquille Point, Craigie Point, fish disease, fishes, Green Point, hemoflagellates, leeches, Oregon State University Hatfield Marine Science Center, parasites, physiology, theses, Yaquina Bay}, url = {https://ir.library.oregonstate.edu/concern/graduate_thesis_or_dissertations/2r36v182q}, author = {Burreson, Eugene M.} } @article {29811, title = {Hatchery manual for the Pacific oyster}, volume = {no.75-002}, year = {1975}, note = {Also numbered as Oregon State University Agricultural Experiment Station Special Report no. 443.}, month = {December_1975}, pages = {22 p.}, institution = {Oregon State University}, address = {Corvallis, Or.}, keywords = {aquaculture, aquatic invertebrates, biological, bivalves, introduced species, molluscs, Pacific oyster=Crassostrea gigas}, url = {https://ir.library.oregonstate.edu/concern/administrative_report_or_publications/c534fq11p}, author = {Breese, Wilbur P. and Malouf, Robert E.} } @article {29901, title = {Marketing characteristics of Oregon{\textquoteright}s fresh frozen shrimp industry}, volume = {no.75-002}, year = {1975}, note = { Also numbered as Special report (Oregon State University. Agricultural Experiment Station) ; 440.}, month = {August_1975}, pages = {23 p.}, institution = {Oregon State University, Sea Grant College Program}, address = {Corvallis, Or.}, keywords = {aquatic invertebrates, catch statistics, Chetco River estuary, Columbia River estuary, Coos River estuary, crustaceans, decapods, economics, general, pink shrimp=Pandalus jordani, Port Orford, seafood processing, Tillamook estuary, Umpqua River estuary, Yaquina Bay}, url = {https://ir.library.oregonstate.edu/concern/administrative_report_or_publications/qz20sx38b}, author = {Langmo, R. D. and Carter, C. N. and Bailey, R. O.} } @article {30001, title = {Monitoring methods for estuarine benthic systems}, volume = {no.52}, year = {1975}, note = {"The purpose of this report is to present methods and procedures for monitoring estuarine benthic systems. Emphasis is given to those features of benthic systems of significant ecological importance. While the experience of the authors has been within estuarine environments, the material contained herein is relevant to a wide range of marine sediments." (From Introduction)}, month = {September_1975}, pages = {37 p.}, institution = {Oregon State University Engineering Experiment Station}, address = {Corvallis, OR}, keywords = {chemical, dredging, human impacts, methodology, nitrogen, nutrient cycles, organic carbon, physical, physical modifications, sediments, sulpher cycle, sulphide}, url = {https://ir.library.oregonstate.edu/concern/technical_reports/8336h288r}, author = {Williamson, Kenneth and Bella, David A.} } @article {29841, title = {Residual toxicity of ozonized seawater to oyster larvae}, volume = {no.75-003}, year = {1975}, month = {November_1975}, pages = {7 p.}, institution = {Oregon State University}, address = {Corvallis, Or.}, keywords = {biological, chemical, Oregon State University Hatfield Marine Science Center, ozone, Pacific oyster = Crassostrea gigas, toxicity}, url = {https://repository.library.noaa.gov/view/noaa/35029}, author = {DeManche, J.M. and Donoghay, Percy L. and Breese, Wilbur P. and Small, Lawrence F.} } @article {29796, title = {Spawning fish surveys in coastal watersheds, 1974}, volume = {no.75-4}, year = {1975}, note = {Spawning fall Chinook and coho salmon were counted. Statistics give historic counts. Includes historical data for the Yaquina River from 1950 through 1974.}, month = {October_1974}, pages = {27 p.}, institution = {Fish Commission of Oregon}, keywords = {Alsea River, Beaver Creek, biological, Chinook salmon = Oncorhynchus tshawytscha, Coho salmon = Oncorhynchus kisutch, Coos Bay, Coquille River, hatchery salmonids, Kilchis River, Nehalem River, Nestucca River, population biology, population count, Siletz River, Siuslaw River, Tenmile Lakes, Tillamook Bay, Tillamook River, weather, wild salmonids, Wilson River}, url = {https://ir.library.oregonstate.edu/concern/technical_reports/m613mz14s}, author = {Berry, Richard L. and Oregon. Dept. of Fish and Wildlife,} } @article {28821, title = {Tidal Flats in Estuarine Water Quality Analysis}, year = {1975}, note = {"Research Grant 16070 DGO."}, pages = {204 p.}, institution = {Department of Civial Engineering, Oregon State University}, address = {Corvallis, Or.}, keywords = {algal species, aquatic invertebrates, aquatic vegetation, bacteria, chemical, Coos Bay estuary, dissolved oxygen, ecosystem modeling, estuarine dynamics, hydrogen sulfide, hydrology, Idaho Flats, mathematical modeling, organic carbon, outfall, Parker Slough, sediments, sulpher cycle, sulphides, Toledo, toxicity, water pollution, water quality, Yaquina Bay}, url = {https://babel.hathitrust.org/cgi/pt?id=uc1.31822020693859\&seq=3}, author = {Bella, David A.} } @article {29586, title = {Coastal Reconnaissance Study, Oregon and Washington}, year = {1974}, note = {Photos}, month = {[1974]}, pages = {474 p.}, institution = {Battelle Pacific Northwest Laboratories}, address = {Richland, Wash.}, keywords = {general, geological, historical, human impacts, map, North Jetty, physical, recreational uses, South Jetty, Yaquina Bay} } @article {29591, title = {Geologic hazards inventory of the Oregon coastal zone}, volume = {no. 17}, year = {1974}, month = {1974}, pages = {94 p.}, institution = {[Oregon Department of Geology and Mineral Industries]}, address = {Portland, Or.}, keywords = {coastal hazards, environmental policy and law, erosion, general, hydrology, land use, physical, sediments}, doi = { }, url = {https://www.oregongeology.org/pubs/mp/MP-17.pdf}, author = {Beaulieu, John D. and Hughes, Paul W. and Mathiot, R. Kent and Oregon. Dept. of Geology and Mineral Industries,} } @article {83289, title = {Oyster farming: culturing, harvesting, and processing a product of the Pacific coast area}, volume = {no.13}, year = {1974}, note = {"A non-scientific brochure for the beginning oyster farmer. It is mentioned that Ostrea lurida is cultured in Yaquina Bay and Netarts Bay, in Oregon."}, institution = {Oregon State University}, address = {Corvallis, OR}, keywords = {aquaculture, aquatic invertebrates, biological, bivalves, eastern oyster=Crassostrea virginica, edible oyster=Ostrea edulis, introduced species, molluscs, Olympia oyster=Ostrea lurida (Ostrea conchaphila), Pacific oyster=Crassostrea gigas}, url = {https://ir.library.oregonstate.edu/concern/administrative_report_or_publications/5t34sk37t}, author = {Breese, Wilbur P. and Wick, William Q.} } @article {29601, title = {Seasonal variations in the populations of two hemiurid trematodes from the pacific staghorn sculpin Leptocottus armatus Girard, in an Oregon estuary.}, journal = { Journal of Parasitology}, volume = {60}, number = {5}, year = {1974}, note = {OSU Sea Grant College Program reprint $\#$ ORESU-R-74-023}, month = {1974}, pages = {p.764-767}, keywords = {aquatic invertebrates, biological, Buoy 15, Buoy 29, Buoy 39, fishes, Genolinea species, Mill Creek, Oregon State University Hatfield Marine Science Center, Pacific staghorn sculpin=Leptocottus armatus, parasites, physiology, platyhelminthes, population biology, salinity, temporal distribution, Tubulovesicula species, water temperature, Yaquina Bay, Yaquina River}, author = {Burreson, Eugene M. and Olson, Robert E.} } @article {29556, title = {Contributions to the life history of the silver surfperch (Hyperprosopon ellipticum) from the Oregon coast}, journal = {California Fish and Game}, volume = {59}, number = {3}, year = {1973}, month = {1973}, pages = {p.178-190}, keywords = {biological, developmental stages, life history information, silver surfperch=Hyperprosopon ellipticum, Yaquina Bay}, url = {https://www.biodiversitylibrary.org/item/61820$\#$page/1/mode/1up}, author = {Wydoski, Richard S. and Bennett, Donald E.} } @article {29531, title = {Environmental geology of Lincoln County, Oregon}, volume = {no.81}, year = {1973}, note = {Map packet available}, month = {September_1973}, pages = {171 p.}, institution = {State of Oregon. Department of Geology and Mineral Industries}, address = {Portland, OR}, keywords = {Alsea River estuary, coastal hazards, environmental policy and law, general ecosystem description, geological, human impacts, hydrology, industrial development, land use, natural resource management, paleosciences, Salmon River estuary, sediment data, Siletz River estuary, urban development, water quality, water rights, Yaquina Bay, Yaquina River, Yaquina River Basin}, url = {https://www.oregongeology.org/pubs/B/B-081.pdf}, author = {Schliker, Herbert G. and Deacon, Robert J. and Olcott, Gordon W. and Beaulieu, John D.} } @article {29391, title = {General Planning Methodology for Oregon{\textquoteright}s Estuarine Natural Resources}, year = {1973}, month = {March_1973}, pages = {113 p.}, institution = {Oregon State University}, address = {Corvallis, Or.}, keywords = {Alsea River estuary, Coos River estuary, Coquille River estuary, ecological values, environmental policy and law, general, methodology, natural resource management, Nehalem River estuary, Nestucca River estuary, Netarts estuary, Salmon River estuary, Sand Lake Estuary, Siletz River estuary, Siuslaw River estuary, Tillamook estuary, Umpqua River estuary, Yaquina Bay, Yaquina River Basin}, url = {https://www.govinfo.gov/content/pkg/CZIC-gc856-b25-1973/pdf/CZIC-gc856-b25-1973.pdf}, author = {Bella, David A. and Klingeman, Peter C.} } @mastersthesis {29396, title = {Host-Parasite Relationships of the Staghorn Sculpin Leptocottus armatus Girard in Oregon}, year = {1973}, note = {Major professor was Ivan Pratt. Masters thesis.}, month = {1973}, pages = {68 p.}, school = {Oregon State University}, type = {Masters Thesis}, edition = {M.S.}, chapter = {Dept. of Zoology}, address = {Corvallis, Or.}, keywords = {biological, fish disease, fishes, Pacific staghorn sculpin=Leptocottus armatus, parasites, physiology, theses, Yaquina Bay}, url = {https://ir.library.oregonstate.edu/concern/graduate_thesis_or_dissertations/7m01bq19d}, author = {Burreson, Eugene M.} } @article {29386, title = {An Inventory and Evaluation of Areas of Environmental Concern in Oregon}, year = {1973}, month = {April_1973}, pages = {104 p,}, institution = {Battelle, Pacific Northwest Laboratories}, address = {Richland, Wash.}, keywords = {birds, general, habitat conservation, Yaquina Bay}, author = {Battelle Pacific Northwest Laboratories, and Oregon, State Water Resources Board,} } @mastersthesis {29381, title = {Population Structure of the Intertidal Shore Crab Hemigrapsus oregonensis (Brachyura, Grapsidae) in Yaquina Bay, a Central Oregon Coast Estuary}, year = {1973}, note = {Studied the population of the yellow (Oregon) shore crab: the level in the intertidal where the crab preferred to live, reproduction levels, mobility, biomass, and the relationship to tidal cycles. Major professor was Dr. C. J. Bayne. }, month = {July_1973}, pages = {128 p.}, school = {Oregon State University}, type = {Doctoral Dissertation}, edition = {Ph.D.}, chapter = {Dept. of Zoology}, address = {Corvallis, Or.}, keywords = {aquatic invertebrates, biological, Coquille Point, crustaceans, decapods, Oregon shore crab = Hemigrapsus oregonensis, population biology, theses, Yaquina Bay}, url = {https://ir.library.oregonstate.edu/concern/graduate_thesis_or_dissertations/37720h00p}, author = {Batie, Robert E.} } @article {29451, title = {Records of the California tonguefish, threadfin shad and smooth alligatorfish from Yaquina Bay, Oregon}, journal = {California Fish and Game}, volume = {59}, number = {2}, year = {1973}, month = {April_1973}, pages = {p.140-142}, keywords = {biological, California tonguefish=Symphurus africauda, geographic distribution, Sally{\textquoteright}s Bend, smooth allifgatorfish=Anoplagonus inermis, The Bend, threadfin shad=Dorosoma petenense, Yaquina Bay Bridge}, url = {https://www.biodiversitylibrary.org/item/61762$\#$page/3/mode/1up}, author = {Krygier, Earl E. and Johnson, William E. and Bond, Carl E.} } @inbook {29481, title = {Volcanics and intrusive rocks of the central part of the Oregon coast range}, booktitle = {Geologic field trips in northern Oregon and southern Washington}, series = {Bulletin (Oregon. Dept. of Geology and Mineral Industries)}, volume = {no.77}, year = {1973}, note = {Good local field trips.}, month = {March_1973}, pages = {p.47-74}, publisher = {Oregon Department of Geology and Mineral Industries}, organization = {Oregon Department of Geology and Mineral Industries}, address = {Portland, Or.}, keywords = {chemical, environmental education, geological, paleosciences, sediment data, Yaquina River, Yaquina River Basin}, url = {https://www.oregongeology.org/pubs/B/B-077.pdf}, author = {Macleod, Norman S. and Snavely, Parke D.}, editor = {Beaulieu, John D.} } @proceedings {29236, title = {Airphoto analysis of ocean outfall dispersion}, year = {1972}, note = {Conference held June, 1972}, month = {1973}, pages = {287 p.}, address = {Jerusalem}, keywords = {computer programs, outfall, physical, pulp mill effluent, remote sensing, statistical analysis, water pollution, Yaquina Bay}, url = {https://tinyurl.com/2agguf2}, author = {James, Wesley P. and Baumgartner, Don J. and Burgess, Fred J.}, editor = {Jenkins, S. H.} } @article {29196, title = {Effects of tidal flats on estuarine water quality}, journal = {Journal of Water Pollution Control Federation}, volume = {44}, number = {1}, year = {1972}, month = {1972}, pages = {p.541-556}, keywords = {Butler Bridge, chemical, dissolved oxygen data, estuarine dynamics, Idaho Flats, Parker Slough, physical, pulp mill effluent, sediments, sulpher cycle, sulphide data, water pollution, water quality, Yaquina Bay}, author = {Bella, David A. and Ramm, Alan E. and Peterson, Paul E.} } @article {29226, title = {Field study and mathematical model of the slack-water buildup of a pollutant in a tidal river}, journal = {Limnology and Oceanography}, volume = {17}, number = {2}, year = {1972}, month = {March_1972}, pages = {p.229-236}, keywords = {chemical, Elk City, hydrology, Mill Creek, outfall, physical, tidal currents, Upper Yaquina River, water pollution}, author = {Grenney, William J. and Bella, David A.} } @article {29206, title = {Ingestion of bivalve molluscan larvae by the polychaete annelid Polydora ligni}, journal = {The Veliger}, volume = {14}, number = {3}, year = {1972}, note = {Good photography of Polydora ligni}, month = {January 1_1972}, pages = {p.274-275}, keywords = {annelids, biological, Japanese littleneck=Tapes phillippinarum, Oregon State University Hatfield Marine Science Center, Pacific oyster=Crassostrea gigas, polychaete worms}, author = {Breese, Wilbur P. and Phibbs, F. Duane} } @mastersthesis {29201, title = {Laboratory Studies of Successional Patterns in Assemblages of Attached Estuarine Diatoms}, year = {1972}, note = {Studied settlement and attachment patterns of diatoms onto artificial substrates and contrasted patterns of Yaquina Bay-normal temperatures with a heated ecosystem.. Includes bw photographs of laboratory set-up. Major professor was Dr. C. David McIntire. Masters thesis.}, month = {June_1972}, pages = {71 p.}, school = {Oregon State University}, type = {Masters Thesis}, edition = {M.S.}, chapter = {Dept. of Botany and Plant Pathology, Botany}, address = {Corvallis, Or.}, keywords = {aquatic vegetation, biological, community ecology, diatoms, ecological succession, species composition, species list, theses, Yaquina Bay}, url = {https://ir.library.oregonstate.edu/concern/graduate_thesis_or_dissertations/6w924d82v}, author = {Berglund, Lisette A.} } @proceedings {29056, title = {An aerial photographic study of waste field from three ocean outfalls}, year = {1971}, note = {Offshore Technology Conference Proceedings, Houston, Texas April 19-21, 1971}, pages = {p.1485-1498}, address = {Houston, TX}, keywords = {computer programs, outfall, physical, pulp mill effluent, remote sensing, statistical analysis, water pollution, Yaquina Bay}, author = {James, Wesley P. and Baumgartner, Don J. and Burgess, Fred J.} } @mastersthesis {29036, title = {Biology of the Redtail Surfperch (Amphistichus rhodoterus)}, year = {1971}, note = {Gives biological data on the redtail surfperch. The area studied was Alsea Bay and Yaquina Bay and the beach/surf zone between the two bays. The fish reside in the bays from April through September. Studied age, growth, reproduction, food habits and parasites. Assessed potential for recreational fishery. Masters thesis. Major professor was Raymond C. Simon.}, pages = {93 p.}, school = {Oregon State University}, type = {Masters Thesis}, edition = {M.S.}, chapter = {Dept. of Fisheries and Wildlife}, address = {Corvallis, Or.}, keywords = {Alsea Bay, biology, life history information, recreational fisheries, redtail surf perch = Amphistichus rhodoterus, theses, Yaquina Bay}, url = {https://ir.library.oregonstate.edu/concern/graduate_thesis_or_dissertations/mc87ps72m}, author = {Bennett, Donald E.} } @article {29031, title = {A procedure for tracing kraft mill effluent from an ocean outfall by constituent fluorescense}, journal = {Water Research}, volume = {5}, number = {8}, year = {1971}, month = {1971}, pages = {p.533-544}, keywords = {pulp mill effluent, Toledo, water pollution, Yaquina Bay}, author = {Baumgartner, D.J. and Feldman, M. H. and Gibbons, C.L.} } @article {29061, title = {Pulp mill outfall analysis by remote sensing techniques}, journal = {Tappi}, volume = {54}, number = {3}, year = {1971}, month = {March_1971}, pages = {p.414-418}, keywords = {computer programs, hydrology, light, outfall, physical, pulp mill effluent, remote sensing, sulphate, waste disposal, water pollution, Yaquina Bay}, author = {James, Wesley P. and Burgess, Fred J.} } @book {23786, title = {Aerial Photographic Tracing of Pulp Mill Effluent in Marine Water}, year = {1970}, note = {Photographs}, month = {August_1970}, pages = {152 p.}, publisher = {Federal Water Quality Administration. U.S. Department of the Interior.}, organization = {Federal Water Quality Administration. U.S. Department of the Interior.}, keywords = {bioassay, computer programs, hydrology, mathematical modeling, outfall, physical, pulp mill effluent, remote sensing, tidal currents, Toledo, toxicity, Umpqua River estuary, waste disposal, water pollution, water temperature data, Yaquina Bay}, url = {https://ir.library.oregonstate.edu/concern/technical_reports/dr26xz07b}, author = {Burgess, Fred J. and James, Wesley P. and U.S. Department of the Interior. Federal Water Quality Administration, and Oregon State University} } @mastersthesis {28831, title = {Effects of the Insecticide Sevin on the Dungeness Crab, Cancer magister}, year = {1970}, note = {Masters thesis. Major professor was Raymond E. Millemann. "This study was undertaken primarily to determine the short-term and long-term effects of the insecticide Sevin on various life history stages of the Dungeness crab (Cancer magister), Also determined was the normalcy of the occurrence of a free prozoeal stage in the life history of this crab, Also, some morphological observations on the sex of third stage juvenile crabs were made." (from the Abstract)}, month = {June_1970}, pages = {53 p.}, school = {, Oregon State University}, type = {Masters Thesis}, edition = {M.S.}, chapter = {Dept. of Fisheries and Wildlife}, address = {Corvallis, Or.}, keywords = {aquatic invertebrates, biological, chemical, crustaceans, decapods, developmental stages, dungeness crab=Metacarcinus magister (Cancer magister), Oregon State University Hatfield Marine Science Center, pesticides, physiology, Sevin, theses, toxicity, Yaquina Bay}, url = {https://ir.library.oregonstate.edu/concern/graduate_thesis_or_dissertations/5425kc85v}, author = {Buchanan, David V.} } @article {28836, title = {Effects of the insecticide sevin on various stages of the dungeness crab, Cancer magister}, journal = {Journal of the Fisheries Research Board of Canada}, volume = {27}, number = {1}, year = {1970}, month = {January_1970}, pages = {p.93-104}, keywords = {aquatic invertebrates, biological, chemical, crustaceans, decapods, developmental stages, dungeness crab=Metacarcinus magister (Cancer magister), Oregon State University Hatfield Marine Science Center, pesticides, physiology, Sevin, toxicity, Yaquina Bay}, author = {Buchanan, David V. and Raymond E Millemann and Stewart, Nelson E.} } @proceedings {28816, title = {Field studies in Yaquina River estuary of surface gas transfer rates}, year = {1970}, note = {"January, 1972" Excellent figures and graphs - data.}, month = {July 7-8, 1970}, pages = {p.115-137}, publisher = {U.S. Environmental Protection Agency}, address = {Washington, D.C.}, keywords = {chemical, Lower Yaquina River, mathematical modeling, methodology, trace gases}, url = {https://tinyurl.com/3kxpsydd}, author = {Baumgartner, Don J. and Feldman, M. H. and Bentsen, L.C. and Cooper, T.L.} } @article {28841, title = {Landslides of Oregon: north coast}, volume = {no.5}, year = {1970}, note = {Includes map showing distribution of landslides along northern Oregon Coast by landslide type.}, month = {[1970]}, pages = {16 p.}, institution = {Oregon State University Sea Grant Marine Advisory Program}, keywords = {coastal hazards, geological, sediments}, url = {https://repository.library.noaa.gov/view/noaa/34922}, author = {Byrne, John V. and North, William B.} } @conference {28826, title = {Some observations on the spawning and early development of the butter calm, Saxidomus giganteus (Deshayes)}, booktitle = {1969 National Shellfisheries Association Proceedings}, volume = {60}, year = {1970}, month = {June_1970}, pages = {p.95-98}, publisher = {National Shellfisheries Association}, organization = {National Shellfisheries Association}, keywords = {biological, butter clam=Saxidomus giganteus, life history information, Oregon State University Hatfield Marine Science Center}, author = {Breese, Wilbur P. and Phibbs, F. Duane} } @mastersthesis {28671, title = {Monitoring Coastal Upwelling by Measuring its Effects within an Estuary}, year = {1969}, note = {Studied upwellings in Yaquina Bay 1963-1967. Changes in water temperature, salinity and dissolved oxygen took place in the Bay during upwelling events. Major professor was Robert L. Smith. }, month = {1969}, pages = {54 p.}, school = {Oregon State University}, type = {Masters Thesis}, edition = {M.S.}, chapter = {Dept. of Oceanography}, address = {Corvallis, Or.}, keywords = {Buoy 15, coastal upwelling, dissolved oxygen, estuarine dynamics, hydrology, methodology, physical, salinity, theses, water temperature, Yaquina Bay}, url = {https://ir.library.oregonstate.edu/concern/graduate_thesis_or_dissertations/p8418r630}, author = {Bourke, Robert H.} } @mastersthesis {28666, title = {Movement and Angler Use of Four Foodfishes in Yaquina Bay, Oregon}, year = {1969}, note = {Major professor was Howard F. Horton. Doctoral dissertation.}, month = {March_1969}, pages = {173 p.}, school = {Oregon State University}, type = {Doctoral Dissertation}, edition = {Ph.D.}, chapter = {Dept. of Fisheries and Wildlife, Fisheries}, address = {Corvallis, Or.}, keywords = {biological, fishes, pile perch=Rhacochilus vacca, starry flounder=Platichthys stellatus, striped seaperch=Embiotoca lateralis, theses, white seaperch=Phanerodon furcatus, Yaquina Bay}, url = {https://ir.library.oregonstate.edu/concern/graduate_thesis_or_dissertations/n583xz21f}, author = {Beardsley, Alan J.} } @article {28696, title = {Potential toxicity of kraft mill effluent after oceanic discharge}, journal = {The Progressive Fish Culturist}, volume = {31}, year = {1969}, month = {1969}, pages = {p.207-212}, keywords = {biological, chemical, fishes, fluffy sculpin=Oligocottus snyderi, pulp mill effluent, salinity, toxicity, water pollution, water temperature, Yaquina Bay}, author = {Courtright, Robert C. and Bond, Carl E.} } @proceedings {28676, title = {Practical problems of phasing an oyster hatchery into production}, volume = {60}, year = {1969}, note = {Abstract only}, month = {1969}, keywords = {aquaculture, aquatic invertebrates, biological, bivalves, edible oyster=Ostrea edulis, introduced species, molluscs, Olympia oyster=Ostrea lurida (Ostrea conchaphila), Oregon State University Hatfield Marine Science Center, Pacific oyster=Crassostrea gigas, Yaquina Bay}, author = {Breese, Wilbur P.} } @article {28686, title = {The prezoeal stage of the Dungeness crab, Cancer magister Dana}, journal = {Biological Bulletin}, volume = {137}, number = {2}, year = {1969}, month = {October_1969}, pages = {p.250-255}, keywords = {biological, crustaceans, decapods, developmental stages, dungeness crab=Metacarcinus magister (Cancer magister), life history information, Oregon State University Hatfield Marine Science Center}, author = {Buchanan, David V. and Raymond E Millemann} } @article {28681, title = {Proposed pilot oyster hatchery in Oregon}, journal = {Proceedings - National Shellfisheries Association}, volume = {59}, year = {1969}, month = {1969}, pages = {p.10}, keywords = {aquaculture, biological, Pacific oyster=Crassostrea gigas}, author = {Breese, Wilbur P.} } @book {28661, title = {A study of two ocean outfalls}, series = {National Council for Air and Stream Improvement technical bulletin}, volume = {no.231}, year = {1969}, month = {December_1969}, publisher = {National Council of the Paper Industry for Air and Stream Improvement, Inc.}, organization = {National Council of the Paper Industry for Air and Stream Improvement, Inc.}, address = {New York, N.Y.}, keywords = {mathematical modeling, outfall, physical, pulp mill effluent, statistical analysis, Umpqua River estuary, waste disposal, water pollution, Yaquina Bay}, author = {Baumgartner, Don J. and James, Wesley P. and O{\textquoteright}Neal, G. L.} } @conference {28536, title = {Difference modeling of stream pollution}, booktitle = {Journal of the Santiary Engineering Division. Proceedings of the American Society of Civil Engineers}, volume = {SA5, 94}, year = {1968}, pages = {p 995-1016}, keywords = {hydrology, mathematical modeling, methodology, physical, water pollution}, author = {Bella, David A. and Dobbins, W. E.} } @article {28551, title = {Effects of the insecticide Sevin on survival and growth of the cockle clam Clinocardium nuttalli}, journal = {Journal of the Fisheries Research Board of Canada}, volume = {23}, number = {8}, year = {1968}, note = {Also published in: Effects of Pesticides on Estuarine Organisms, Department of Fisheries and Wildlife Oregon State University, 31 July 1969}, month = {1968}, pages = {p.1621-1635}, keywords = {aquatic invertebrates, biological, bivalves, chemical, molluscs, Nuttall cockle=Clinocardium nuttallii, pesticides, physiology, Sevin, toxicity, Yaquina Bay}, author = {Butler, Jerry A. and Raymond E Millemann and Stewart, Nelson E.} } @mastersthesis {28546, title = {Effects of the Insecticide Sevin on the Cockle Clam Clinocardium nuttalli (Conrad)}, year = {1968}, note = {Major professor was Dr. Raymond E. Millermann. Masters thesis.}, month = {1968}, pages = {54 p.}, school = {Oregon State University}, type = {Masters Thesis}, edition = {M.S. }, chapter = {Dept. of Fisheries and Wildlife, Fisheries}, address = {Corvallis, Or.}, keywords = {aquatic invertebrates, biological, bivalves, chemical, molluscs, Nuttall cockle=Clinocardium nuttallii, pesticides, physiology, Sevin, theses, toxicity, Yaquina Bay}, url = {https://ir.library.oregonstate.edu/concern/graduate_thesis_or_dissertations/5h73q1404}, author = {Butler, Jerry A.} } @article {28541, title = {An oyster seed industry for Oregon}, journal = {Oregon{\textquoteright}s Agricultural Progress}, volume = {15}, number = {2}, year = {1968}, month = {Summer_1968}, pages = {p.8-9}, keywords = {aquaculture, biological, kumamoto oyster=Crassostrea sikamea, life history information, Oregon State University Hatfield Marine Science Center, Pacific oyster=Crassostrea gigas}, url = {https://ir.library.oregonstate.edu/concern/technical_reports/sq87bv30n}, author = {Breese, Wilbur P.} } @article {28566, title = {A preliminary investigation of the heavy mineral suites of the coastal rivers and beaches of Oregon and northern California}, journal = {The Ore Bin}, volume = {30}, number = {9}, year = {1968}, month = {September_1968}, pages = {p.165-180}, keywords = {Alsea River, Chetco River, Coos River, Coquille River, geological, heavy minerals, hydrology, Kilchis River, Little Nestucca River, Miami River, Millicoma River, Necanicum River, Nehalem River, Nestucca River, North Fork, paleosciences, physical, Rogue River, Salmon River, sediment data, Siletz River, Siuslaw River, Sixes River, Tillamook River, Trask River, Umpqua River, Wilson River, Yaquina River, Yaquina River Basin}, url = {https://ir.library.oregonstate.edu/concern/administrative_report_or_publications/p26770670}, author = {Kulm, Laverne D. and Scheidegger, K. F. and Byrne, John V. and Spigai, J. J.} } @article {28506, title = {Acute toxicity of the insecticide sevin and its hydrolytic product 1-naphthol to some marine organisms}, journal = {Transactions of the American Fisheries Society}, volume = {96}, number = { 1}, year = {1967}, month = {January_ 1967}, pages = {p.25-30}, keywords = {biological, chemical, pesticides, Sevin, toxicity, Yaquina Bay}, author = {Stewart, Nelson E. and Raymond E Millemann and Breese, Wilbur P.} } @book {28461, title = {Sediments of Yaquina Bay, Oregon}, series = {Estuaries [conference papers]}, volume = {83}, year = {1967}, note = {Excellent data maps. Many sampling locations - see page 230.}, month = {1967}, pages = {p.226-238}, publisher = {American Association for the Advancement of Science}, organization = {American Association for the Advancement of Science}, chapter = {p.226-238}, address = {Washington, D.C.}, keywords = {climate, coastal dunes, Elk City, estuarine dynamics, general ecosystem description, geological, hydrology, Idaho Flats, Oneatta Point, physical, precipitation, salinity, Sally{\textquoteright}s Bend, sediment data, Yaquina Bay, Yaquina Head, Yaquina River, Yaquina River Basin}, url = { }, author = {Kulm, Laverne D. and Byrne, John V.}, editor = {Lauff, George H. (ed.)} } @mastersthesis {28326, title = {The Morphology and Ecology of Echinorhynchus lageniformas Ekbaum, 1938 (Acanthocephala)}, year = {1966}, note = {This is a study of a common intestinal parasite of starry flounder. Slightly over 40\% of flounder from Yaquina Bay that were examined were found to be infected. Includes electromicrographs. Major professor was Ivan Pratt. Masters thesis.}, month = {1966}, pages = {42 p.}, school = {Oregon State University}, type = {Masters Thesis}, edition = {M.S.}, chapter = {Dept. of Zoology}, address = {Corvallis, Or.}, keywords = {acanthocephalans, bacteria, biological, Echinorhynchus species, fishes, Hinton Point, life history information, parasites, physiology, Sally{\textquoteright}s Slough, Starry flounder = Platichthys stellatus, theses, Yaquina Bay}, url = {https://ir.library.oregonstate.edu/concern/graduate_thesis_or_dissertations/6108vf613}, author = {Barnes, James R.} } @book {28331, title = {Pulp Mill Waste Degredation in Marine Waters: April 1, 1964 through March 31, 1966}, year = {1966}, note = {"This progress report describes research conducted on pulp mill waste degradation in marine waters ... Engineering investigations ... have centered upon (a) treatment of mill wastes by dilution; (b) foam separation of strong wastes and (c) treatment of evaporator condensates by carbon adsorption. Biological studies have been concerned with development of bioassays suitable for assessing the effect of pulp mill effluent on the marine environment and for evaluating waste treatment methods." (from the Summary) Good data, photographs, Research grant WP-524}, month = {March_1966}, pages = {88 p. + 28 p. appendix}, publisher = {Oregon State University}, organization = {Oregon State University}, address = {Corvallis, Or.}, keywords = {algal species, aquatic invertebrates, aquatic vegetation, bioassay, biological, bivalves, blue mussel=Mytilus edulis, chemical, developmental stages, economics, fishes, guppy=Poecilia reticulata, introduced species, Lower Yaquina River, molluscs, outfall, Pacific oyster=Crassostrea gigas, pulp mill effluent, salinity data, threespine stickleback=Gasterosteus aculeatus, Toledo, toxicity, waste disposal, water pollution, water temperature data, Yaquina Bay}, url = {https://ir.library.oregonstate.edu/concern/technical_reports/z890rt651}, author = {Burgess, Fred J. and Dimick, Roland E.} } @article {28356, title = {Sedimentary response to hydrography in an Oregon estuary}, journal = {Marine Geology: International Journal of Marine Geology, Geochemistry and Geophysics}, volume = {4}, number = {2}, year = {1966}, note = {Excellent data maps}, month = {April_1966}, pages = {p.85-118}, keywords = {climate, estuarine dynamics, general ecosystem description, geological, heavy minerals, hydrology, Lower Yaquina River, nitrogen, organic carbon, physical, salinity data, sediment data, tidal currents, Yaquina Bay}, author = {Kulm, Laverne D. and Byrne, John V.} } @article {28231, title = {An ambicolored starry flounder from Yaquina Bay}, journal = {California Fish and Game}, volume = {51}, number = {2}, year = {1965}, month = {April_1965}, pages = {p.126-128}, keywords = {biological, fishes, life history information, new species description, physiology, Starry flounder = Platichthys stellatus, Yaquina Bay}, url = {https://www.biodiversitylibrary.org/item/61619$\#$page/3/mode/1up}, author = {Beardsley, Alan J. and Horton, Howard F.} } @conference {28241, title = {Bay mussel embryo bioassay}, booktitle = {Proceedings of the Twelfth Pacific Northwest Industrial Waste Conference}, year = {1965}, pages = {p.165-175}, publisher = {University of Washington}, organization = {University of Washington}, keywords = {bay mussel=Mytilus edulis, bioassay, biological, pulp mill effluent, Yaquina Bay Fisheries Laboratory}, author = {Dimick, Roland E. and Breese, Wilbur P.} } @article {28321, title = {Water Study, Lincoln County, Oregon}, year = {1965}, note = {In four volumes. v. 1. Economic trends and population changes.--v. 2. Water sources, supply and quality, by State Water Resources Board.--v. 3. Water supply plan, by R.H. Erichsen and Associates.--[v. 4] Summary of water report.}, address = {Salem, Or.}, keywords = {demographics, economics, environmental policy and law, general, industrial development, Lincoln County, natural resource management, urban development, water quality, water rights, water use, Yaquina Bay}, author = {University of Oregon. Bureau of Municipal Research and Service, and Oregon. State Water Resources Board and Erichsen (R.H.) and Associates,} } @article {28156, title = {Geologic interpretation of reconnaissance gravity and aeromagnetic surveys in northwestern Oregon}, volume = {no.1181-N}, year = {1964}, note = { BOUND IN WITH: Geologic sketch of Northwestern Oregon Map packet in the back}, institution = {United States Government Printing Office}, address = {Washington, D.C.}, keywords = {geology, gravity, paleosciences, physical, Yaquina Bay}, url = {https://pubs.usgs.gov/bul/1181m-n/report.pdf}, author = {Bromery, R. W. and Snavely, Parke D. Jr. and U.S. Geological Survey,} } @article {28196, title = {Tsunamis on the Oregon coast}, journal = {The Ore Bin}, volume = {26}, number = {12}, year = {1964}, note = {Reports on wave heights in Oregon estuaries following the 1964 Alaska earthquake.}, month = {December_1964}, pages = {p.231-232}, keywords = {Chetco River estuary, coastal hazards, Coos River estuary, Depoe Bay, earthquakes, Nehalem River estuary, physical, Siuslaw River estuary, Tillamook estuary, tsunamis, Umpqua River estuary, wave height data, Yaquina Bay}, url = {https://ir.library.oregonstate.edu/concern/administrative_report_or_publications/9s161b56x}, author = {Schatz, Clifford E. and Curl, Herbert Jr. and Burt, Wayne V.} } @article {28136, title = {Nearshore marine gravity range, Newport, Oregon}, volume = {no.9}, year = {1963}, note = {Publication is also numbered in the series Reference (Oregon State University. Dept. of Oceanography): no.63-16.}, month = {July_1963}, pages = {11 p.}, institution = {Oceanography Department, Oregon State University}, address = {Corvallis, Or.}, keywords = {Coast Guard Station, gravity, physical, Yaquina Bay}, url = {https://ir.library.oregonstate.edu/concern/technical_reports/rx913r17x}, author = {Rinehart, Wilbur A. and Berg Jr., Joseph W.} } @article {28116, title = {Stimulation of spawning in the mussels, Mytilus edulis Linnaeus and Mytilus californianus Conrad, by kraft mill effluent}, journal = {The Biological Bulletin}, volume = {125}, number = {2}, year = {1963}, month = {October_1963}, pages = {p.197-205}, keywords = {aquatic invertebrates, bioassay, biological, bivalves, blue mussel=Mytilus edulis, California mussel=Mytilus californianus, chemical, molluscs, physiology, pulp mill effluent, reproductive behavior, sulphate, water pollution, Yaquina Bay, Yaquina River}, author = {Breese, Wilbur P. and Raymond E Millemann and Dimick, Roland E.} } @article {27986, title = {Recent studies in the hydrography of Oregon estuaries}, journal = {Research Briefs. Fish Commission of Oregon}, volume = {7}, number = {1}, year = {1959}, month = {July_1959}, pages = {p.14-27}, keywords = {Alsea Bay, aquatic invertebrates, bivalves, estuarine dynamics, Grassy Point, hydrology, molluscs, Netarts Bay, physical, physical modifications, salinity data, Siletz Bay, Siuslaw River estuary, Umpqua River estuary, water pollution, Yaquina Bay}, url = {https://ir.library.oregonstate.edu/concern/technical_reports/p2676w188}, author = {Burt, Wayne V. and McAlister, W. Bruce} } @article {27951, title = {Hydrography of Oregon estuaries, June 1956 to September 1958}, volume = {no.3}, year = {1958}, note = {October, 1958. Also carries numbering in the series Reference (Oregon State College. School of Science): no.58-6. }, pages = {18 p.}, institution = {Oregon State University}, address = {Corvallis, Or.}, keywords = {Butler Bridge, Criteser{\textquoteright}s Marina, Elk City, estuarine dynamics, hydrology, Oneatta Point, physical, precipitation data, salinity data, tidal data, Winant, Yaquina Bay, Yaquina City, Yaquina River}, url = {https://ir.library.oregonstate.edu/concern/technical_reports/t722hb284}, author = {Burt, Wayne V. and McAlister, W. Bruce and Oregon State University. School of Science,} } @article {27921, title = {Computation of pollution in the Yaquina River estuary}, journal = {Sewage and Industrial Wastes}, volume = {29}, number = {12}, year = {1957}, month = {December_1957}, pages = {p.1385-1389}, keywords = {Elk City, Grassy Point, McLean Point, outfall, pulp mill effluent, salinity data, statistical analysis, Toledo, water pollution, Yaquina Bay, Yaquina Bay Bridge, Yaquina City, Yaquina River}, author = {Burt, Wayne V. and Marriage, Lowell D.} } @article {27931, title = {Water quality data inventory supplement}, volume = {no.2}, year = {1957}, note = {June, 1957.}, pages = {71 p.}, institution = {Engineering Experiment Station, Oregon State College}, address = {[Corvallis, Or.]}, keywords = {chloride, Coos River estuary, Coquille River estuary, flouride, hydrology, physical, Rogue River estuary, Siletz River estuary, Siltcoos estuary, Tahkenitch estuary, Tenmile estuary, turbidity data, Umpqua River estuary, water quality, water temperature data, Yaquina Bay, Yaquina Bay Fisheries Laboratory, Yaquina River}, author = {Northcraft, Martin and Westgarth, Warren C. and Oregon. State Water Resources Board} } @article {27886, title = {Flushing of pollutants in the Yaquina River estuary}, volume = {no.1}, year = {1956}, note = {Mimeograph. "The purpose of this study is to estimate the time and space distribution which pollutants would assume if they were introduced at various places in the Yaquina Bay and River system." (p.1) At this time, during heavy rains sewage runoff from the City of Toledo was dumped into the river. The report suggests possible locations for sewage outfalls that would reduce river pollution. Reference 56-1.}, month = {April_1956}, pages = {25 p.}, institution = {Oregon State College, School of Science}, address = {Corvallis, Or.}, keywords = {estuarine dynamics, Grassy Point, hydrology, McLean Point, outfall, physical, pulp mill effluent, salinity data, tidal data, Toledo, water pollution, Yaquina Bay, Yaquina Bay Bridge, Yaquina City, Yaquina River}, url = {https://ir.library.oregonstate.edu/concern/technical_reports/1j92g781d}, author = {Burt, Wayne V.} } @article {27891, title = {Hydrography of Oregon estuaries, prior to June 1956}, volume = {no 2. }, year = {1956}, note = {Also carries numbering in the series Reference (Oregon State College. School of Science) no.56-2. "June, 1956."}, pages = {22 p.}, institution = {Oregon State College}, address = {Corvallis, Or.}, keywords = {Butler Bridge, estuarine dynamics, hydrology, Mill Creek, Oysterville, salinity data, tidal data, water temperature data, Yaquina Bay, Yaquina City, Yaquina River}, url = {https://ir.library.oregonstate.edu/concern/technical_reports/vm40xs83p}, author = {Burt, Wayne V. and Oregon State University. School of Science,} } @article {27916, title = {Water quality data inventory}, volume = {no.1}, year = {1956}, month = {[1956?]}, institution = {Engineering Experiment Station, Oregon State College}, address = {[Corvallis, OR]}, keywords = {Alsea River estuary, bacteria, Coos River estuary, Coquille River estuary, hydrology, McLean Point, Oneatta Point, physical, Rogue River estuary, salinity data, Siletz River estuary, Siuslaw River estuary, Toledo, Umpqua River estuary, Upper Yaquina River, water quality, water temperature data, Yaquina Bay, Yaquina River}, author = {Westgarth, Warren C. and Northcraft, Martin and Oregon. State Water Resources Board} } @mastersthesis {27851, title = {Larval Setting and Survival of Young Oysters, Ostrea lurida Carp., under Laboratory Conditions}, year = {1955}, note = {Major professor was R. E. Dimick. Masters thesis. Studies "on the setting of free-swimming oyster larvae" at the Yaquina Bay Fisheries Laboratory in 1954-55. Nice summary of OSU{\textquoteright}s early oyster research at Yaquina Bay.}, month = {June_1955}, pages = {95 p.}, school = {Oregon State College}, type = {Masters Thesis}, edition = {M.S.}, chapter = {Dept. of Fish and Game Management}, address = {Corvallis, Or.}, keywords = {aquaculture, aquatic invertebrates, biological, bivalves, developmental stages, historical, life history information, molluscs, Olympia oyster=Ostrea lurida (Ostrea conchaphila), physiology, population biology, theses, Yaquina Bay, Yaquina Bay Fisheries Laboratory}, url = {https://ir.library.oregonstate.edu/concern/graduate_thesis_or_dissertations/c821gn63w}, author = {Becker, Clarence D.} } @mastersthesis {27781, title = {Rearing of the Native Pacific Coast Oyster Larvae, Ostrea lurida, under ControlledLLaboratory Conditions}, year = {1953}, note = {Major professor was Roland E. Dimick. Masters thesis.}, month = {June_1953}, pages = {43 p.}, school = {Oregon State College}, type = {Masters Thesis}, edition = {M.S.}, chapter = {Dept. of Fish and Game Management}, address = {Corvallis, Or.}, keywords = {aquaculture, aquatic invertebrates, biological, bivalves, developmental stages, molluscs, Olympia oyster=Ostrea lurida (Ostrea conchaphila), physiology, population biology, reproductive behavior, theses, Yaquina Bay, Yaquina Bay Fisheries Laboratory}, url = {https://ir.library.oregonstate.edu/concern/graduate_thesis_or_dissertations/nc580p45h}, author = {Breese, Wilbur P.} } @mastersthesis {83291, title = {Rearing of the Native Pacific Coast Oyster Larvae, Ostrea lurida, under Controlled Laboratory Conditions}, volume = {M.S.}, year = {1953}, note = {Major professor was Roland E. Dimick. Masters thesis.}, month = {June_1953}, pages = {48 p.}, school = {Oregon State College}, address = {Corvallis, Or.}, keywords = {aquaculture, aquatic invertebrates, biological, bivalves, developmental stages, molluscs, Olympia oyster=Ostrea lurida (Ostrea conchaphila), physiology, population biology, reproductive behavior, theses, Yaquina Bay, Yaquina Bay Fisheries Laboratory}, url = {https://ir.library.oregonstate.edu/concern/graduate_thesis_or_dissertations/nc580p45h}, author = {Breese, Wilbur P.} } @article {27701, title = {Report on sanitary survey Yaquina Bay shellfish growing areas May, 1951 by Oregon State Sanitary Authority}, volume = {no.28}, year = {1951}, note = {"The waters of the bay are grossly polluted from Toledo to a point about five miles below Toledo. The bay is moderately polluted tram a point five miles below Tolddo toCoquille Point, and satisfactory for shellfish propagation tram Coquille Point to Newport. The discharge of untreated sewage by the city of Toledo into Yaquina Bay isthe cause of nearly all the pollution found in the waters of the bay.. . The alarming rate of increase in pollution of Yaquina Bay can be shown by the fact that for sections III and IV the median MPN [most probable number] for samples collected on ebb tide was 23 in 1944, 130 in 1948, and 240 in 1951." (from Summary and Conclusions, p.4)}, pages = {5 p.}, institution = {Oregon Fish Commission}, address = {[Portland, Or.]}, keywords = {bacteria, Coquille Point, human impacts, industrial development, molluscs, oysters, Toledo, water pollution, water quality, Yaquina Bay, Yaquina River}, url = {https://ir.library.oregonstate.edu/concern/technical_reports/6t053g530}, author = {Boydston, James R. and Oregon. Fish Commission} } @article {27671, title = {Pleistocene history of the Newport, Oregon region}, journal = {Geological News Letter}, volume = {16}, year = {1950}, note = {This article gives a concise summary of Baldwin{\textquoteright}s work on the area in the 1940s. It includes a hand-drawn map. There is an interesting speculation about a shift in the mouth of the Yaquina River. "The former mouth of the Yaquina River probably lies somewhat south of its present mouth beneath the dune area where evidence is buried. At present, the dunes have been encroaching northward and driving the river against the resistant Astoria sandstone along the north bank," (p.79)}, month = {October_1950}, pages = {p.77-81}, keywords = {geological, kitchen middens, paleosciences, Yaquina Bay, Yaquina River, Yaquina River Basin}, url = {https://www.gsoc.org/s/1950-NEWSLETTERS.pdf}, author = {Baldwin, Ewart M.} } @article {27646, title = {Water table elevations in some Pacific coast beaches}, journal = {Transactions, American Geophysical Union}, volume = {30}, number = {2}, year = {1949}, month = {April_1949}, pages = {p.293-294}, keywords = {hydrology, physical, Sand Lake Estuary}, author = {Isaacs, J.D. and Bascom, W.N} } @article {27581, title = {Anthony green heron at Yaquina Bay, Oregon}, journal = {The Murrelet}, volume = {27}, number = {1}, year = {1946}, month = {1946}, pages = {p.12}, keywords = {Anthony green heron=Butorides virescens anthonyi, biological, birds, geographical distribution, Lower Yaquina River, Olalla Slough, Yaquina Bay}, author = {Broadbrooks, Harold E.} } @article {27471, title = {Occurrence of the marbled godwit on the coast of Oregon}, journal = {Condor}, volume = {40}, year = {1938}, month = {1938}, pages = {88-89}, keywords = {biological, birds, geographical distribution, marbled godwit=Limosa fedoa, Yaquina Bay}, url = {https://sora.unm.edu/node/2016}, author = {Braly, J.C.} } @book {27451, title = {Mammals and life zones of Oregon}, series = {North American Fauna}, volume = {no.55}, year = {1936}, note = {Map in front pocket. Good photographs. Issued by U.S. Department of Agriculture, Bureau of Biological Survey}, month = {June_1936}, pages = {416 p.}, publisher = {Government Printing Office}, organization = {Government Printing Office}, address = {Washington, DC}, keywords = {abundance, biological, birds, climate, Coquille River estuary, general, general ecosystem description, geographical distribution, terrestrial mammals, terrestrial vegetation, Yaquina River, Yaquina River Basin}, url = {http://www.biodiversitylibrary.org/item/59527$\#$page/9/mode/1up}, author = {Baily, Vernon} } @inbook {27061, title = {Yaquina Bay}, booktitle = {The works of Hubert Howe Bancroft. Volume XXX : History of Oregon, Vol. II. 1848-1888}, volume = {v.30}, year = {1888}, note = {Describes the wreck of the schooner Juliet on January 28, 1852, iwhen it was driven onshore near Yaquina Bay. While passengers and crew waited for horses to arrive that would allow them to travel to the Willamette Valley, they explored the area, discovering the attractive farmland, native oysters and clams, and noted that the bay was navigable for shallow-draft vessels, "but the entrance was a bad one," (p.203). Available online in Google Books.}, pages = {p.203-204}, publisher = {A. L. Bancroft \& company}, organization = {A. L. Bancroft \& company}, address = {San Francisco}, keywords = {historical, Yaquina Bay}, url = {https://tinyurl.com/6epklhg}, author = {Bancroft, Hubert Howe} }